RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 NLGN1Q8N2Q7 840 aa16.19■□□□□ 0.18
SND1-209ENST00000470723 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
SND1-209ENST00000470723 TM4SF1P30408 202 aa16.18■□□□□ 0.18
SND1-209ENST00000470723 G2E3Q7L622 706 aa16.18■□□□□ 0.18
SND1-209ENST00000470723 PLBD2Q8NHP8 589 aa16.18■□□□□ 0.18
SND1-209ENST00000470723 TCERG1O14776 1098 aaKnown RBP16.17■□□□□ 0.18
SND1-209ENST00000470723 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
SND1-209ENST00000470723 MTFR1LQ9H019 292 aa16.17■□□□□ 0.18
SND1-209ENST00000470723 PPP1R1BQ9UD71 204 aaPredicted RBP16.17■□□□□ 0.18
SND1-209ENST00000470723 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
SND1-209ENST00000470723 CASZ1Q86V15 1759 aa16.17■□□□□ 0.18
SND1-209ENST00000470723 FLIIQ13045 1269 aa16.16■□□□□ 0.18
SND1-209ENST00000470723 TRIM28Q13263 835 aaKnown RBP16.16■□□□□ 0.18
SND1-209ENST00000470723 FKBP8Q14318 412 aa16.16■□□□□ 0.18
SND1-209ENST00000470723 HLFQ16534 295 aa16.16■□□□□ 0.18
SND1-209ENST00000470723 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
SND1-209ENST00000470723 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
SND1-209ENST00000470723 KIF6Q6ZMV9 814 aa16.16■□□□□ 0.18
SND1-209ENST00000470723 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
SND1-209ENST00000470723 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
SND1-209ENST00000470723 AIMP1Q12904 312 aaKnown RBP16.15■□□□□ 0.18
SND1-209ENST00000470723 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
SND1-209ENST00000470723 SGIP1Q9BQI5 828 aa16.15■□□□□ 0.18
SND1-209ENST00000470723 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
SND1-209ENST00000470723 MSH5O43196 834 aa16.14■□□□□ 0.17
SND1-209ENST00000470723 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.17
SND1-209ENST00000470723 TCIRG1Q13488 830 aa16.14■□□□□ 0.17
SND1-209ENST00000470723 ZNF34Q8IZ26 560 aa16.14■□□□□ 0.17
SND1-209ENST00000470723 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
SND1-209ENST00000470723 PTPRCP08575 1304 aa16.14■□□□□ 0.17
SND1-209ENST00000470723 PI4KAP2A4QPH2 592 aa16.13■□□□□ 0.17
SND1-209ENST00000470723 HSP90AB3PQ58FF7 597 aa16.13■□□□□ 0.17
SND1-209ENST00000470723 PI4KAP1Q8N8J0 262 aa16.13■□□□□ 0.17
SND1-209ENST00000470723 ARXQ96QS3 562 aa16.13■□□□□ 0.17
SND1-209ENST00000470723 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
SND1-209ENST00000470723 NUP98P52948 1817 aa16.12■□□□□ 0.17
SND1-209ENST00000470723 BCAR3O75815 825 aa16.12■□□□□ 0.17
SND1-209ENST00000470723 PTGER2P43116 358 aa16.12■□□□□ 0.17
SND1-209ENST00000470723 ISCA1Q9BUE6 129 aa16.12■□□□□ 0.17
SND1-209ENST00000470723 METTL22Q9BUU2 404 aaPredicted RBP16.12■□□□□ 0.17
SND1-209ENST00000470723 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
SND1-209ENST00000470723 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
SND1-209ENST00000470723 NFIXQ14938 502 aa16.11■□□□□ 0.17
SND1-209ENST00000470723 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
SND1-209ENST00000470723 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
SND1-209ENST00000470723 SPON1Q9HCB6 807 aa16.11■□□□□ 0.17
SND1-209ENST00000470723 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
SND1-209ENST00000470723 NOB1Q9ULX3 412 aaKnown RBP16.11■□□□□ 0.17
SND1-209ENST00000470723 ADCY9O60503 1353 aa16.11■□□□□ 0.17
SND1-209ENST00000470723 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
SND1-209ENST00000470723 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
SND1-209ENST00000470723 FKBP5Q13451 457 aaPredicted RBP16.1■□□□□ 0.17
SND1-209ENST00000470723 SETDB2Q96T68 719 aa16.1■□□□□ 0.17
SND1-209ENST00000470723 BCL2L13Q9BXK5 485 aa16.1■□□□□ 0.17
SND1-209ENST00000470723 ATF5Q9Y2D1 282 aaPredicted RBP16.1■□□□□ 0.17
SND1-209ENST00000470723 MAP3K2Q9Y2U5 619 aa16.1■□□□□ 0.17
SND1-209ENST00000470723 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
SND1-209ENST00000470723 POLRMTO00411 1230 aaKnown RBP16.09■□□□□ 0.17
SND1-209ENST00000470723 PARP10Q53GL7 1025 aa16.09■□□□□ 0.17
SND1-209ENST00000470723 DNAAF4Q8WXU2 420 aa16.09■□□□□ 0.17
SND1-209ENST00000470723 IBTKQ9P2D0 1353 aaPredicted RBP16.09■□□□□ 0.17
SND1-209ENST00000470723 MMP10P09238 476 aa16.08■□□□□ 0.16
SND1-209ENST00000470723 DDR1Q08345 913 aa16.08■□□□□ 0.16
SND1-209ENST00000470723 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
SND1-209ENST00000470723 KIF16BQ96L93 1317 aa16.08■□□□□ 0.16
SND1-209ENST00000470723 SCN7AQ01118 1682 aa16.08■□□□□ 0.16
SND1-209ENST00000470723 IGKV5-2P06315 115 aa16.07■□□□□ 0.16
SND1-209ENST00000470723 BEND3Q5T5X7 828 aa16.07■□□□□ 0.16
SND1-209ENST00000470723 MSL1Q68DK7 614 aa16.07■□□□□ 0.16
SND1-209ENST00000470723 NLRP10Q86W26 655 aa16.07■□□□□ 0.16
SND1-209ENST00000470723 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
SND1-209ENST00000470723 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
SND1-209ENST00000470723 API5Q9BZZ5 524 aaKnown RBP16.07■□□□□ 0.16
SND1-209ENST00000470723 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
SND1-209ENST00000470723 F6X3S4 739 aa16.06■□□□□ 0.16
SND1-209ENST00000470723 SERPINB2P05120 415 aa16.06■□□□□ 0.16
SND1-209ENST00000470723 POLD1P28340 1107 aa16.06■□□□□ 0.16
SND1-209ENST00000470723 SLC10A5Q5PT55 438 aa16.06■□□□□ 0.16
SND1-209ENST00000470723 ATF7IPQ6VMQ6 1270 aa16.06■□□□□ 0.16
SND1-209ENST00000470723 PARP3Q9Y6F1 533 aa16.06■□□□□ 0.16
SND1-209ENST00000470723 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
SND1-209ENST00000470723 NEXNQ0ZGT2 675 aa16.05■□□□□ 0.16
SND1-209ENST00000470723 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
SND1-209ENST00000470723 ZKSCAN2Q63HK3 967 aa16.05■□□□□ 0.16
SND1-209ENST00000470723 TPTE2Q6XPS3 522 aa16.05■□□□□ 0.16
SND1-209ENST00000470723 MYD88Q99836 296 aa16.05■□□□□ 0.16
SND1-209ENST00000470723 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 NEURL1BA8MQ27 555 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 ATP5J2-PTCD1G3V325 749 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 ALDH1L1O75891 902 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 TRIM27P14373 513 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 BICDL1Q6ZP65 573 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 PPP1R42Q7Z4L9 355 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 NYXQ9GZU5 481 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 ARFGEF2Q9Y6D5 1785 aa16.04■□□□□ 0.16
SND1-209ENST00000470723 H7C1W4 665 aa16.03■□□□□ 0.16
SND1-209ENST00000470723 GPTP24298 496 aa16.03■□□□□ 0.16
SND1-209ENST00000470723 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
SND1-209ENST00000470723 UTP14AQ9BVJ6 771 aaKnown RBP16.03■□□□□ 0.16
SND1-209ENST00000470723 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms