RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SCN7AQ01118 1682 aa25.66■■□□□ 1.7
NCKIPSD-209ENST00000470006 HEG1Q9ULI3 1381 aa25.66■■□□□ 1.7
NCKIPSD-209ENST00000470006 SCN4AP35499 1836 aa25.65■■□□□ 1.7
NCKIPSD-209ENST00000470006 DIAPH1O60610 1272 aaKnown RBP25.65■■□□□ 1.7
NCKIPSD-209ENST00000470006 LBX1P52954 281 aa25.65■■□□□ 1.7
NCKIPSD-209ENST00000470006 ZNF790Q6PG37 636 aa25.65■■□□□ 1.7
NCKIPSD-209ENST00000470006 A1BGP04217 495 aa25.64■■□□□ 1.7
NCKIPSD-209ENST00000470006 CCDC93Q567U6 631 aa25.63■■□□□ 1.69
NCKIPSD-209ENST00000470006 L3MBTL3Q96JM7 780 aaPredicted RBP25.63■■□□□ 1.69
NCKIPSD-209ENST00000470006 NBPF5PQ86XG9 351 aaPredicted RBP25.62■■□□□ 1.69
NCKIPSD-209ENST00000470006 FMNL2Q96PY5 1086 aa25.62■■□□□ 1.69
NCKIPSD-209ENST00000470006 HACL1Q9UJ83 578 aa25.62■■□□□ 1.69
NCKIPSD-209ENST00000470006 CAMTA2O94983 1202 aa25.61■■□□□ 1.69
NCKIPSD-209ENST00000470006 DZIP3Q86Y13 1208 aaKnown RBP25.61■■□□□ 1.69
NCKIPSD-209ENST00000470006 WBP1LQ9NX94 342 aa25.61■■□□□ 1.69
NCKIPSD-209ENST00000470006 GNAT3A8MTJ3 354 aa25.6■■□□□ 1.69
NCKIPSD-209ENST00000470006 ITGBL1O95965 494 aaPredicted RBP25.6■■□□□ 1.69
NCKIPSD-209ENST00000470006 ZNF277Q9NRM2 450 aaPredicted RBP25.6■■□□□ 1.69
NCKIPSD-209ENST00000470006 ARFGEF2Q9Y6D5 1785 aa25.59■■□□□ 1.69
NCKIPSD-209ENST00000470006 EPHX2P34913 555 aa25.59■■□□□ 1.69
NCKIPSD-209ENST00000470006 DEFB115Q30KQ5 88 aa25.59■■□□□ 1.69
NCKIPSD-209ENST00000470006 ZNF541Q9H0D2 1346 aa25.59■■□□□ 1.69
NCKIPSD-209ENST00000470006 U2SURPO15042 1029 aaKnown RBP25.58■■□□□ 1.69
NCKIPSD-209ENST00000470006 FKBP4Q02790 459 aaKnown RBP eCLIP25.58■■□□□ 1.69
NCKIPSD-209ENST00000470006 AMER1Q5JTC6 1135 aaPredicted RBP25.58■■□□□ 1.69
NCKIPSD-209ENST00000470006 IL17REQ8NFR9 667 aa25.58■■□□□ 1.69
NCKIPSD-209ENST00000470006 NPR1P16066 1061 aa25.57■■□□□ 1.68
NCKIPSD-209ENST00000470006 TRIM26Q12899 539 aaPredicted RBP25.57■■□□□ 1.68
NCKIPSD-209ENST00000470006 CNTROBQ8N137 903 aa25.57■■□□□ 1.68
NCKIPSD-209ENST00000470006 GAS2L2Q8NHY3 880 aa25.57■■□□□ 1.68
NCKIPSD-209ENST00000470006 ABT1Q9ULW3 272 aaKnown RBP25.57■■□□□ 1.68
NCKIPSD-209ENST00000470006 PIP4K2AP48426 406 aaPredicted RBP25.56■■□□□ 1.68
NCKIPSD-209ENST00000470006 MAP1SQ66K74 1059 aaPredicted RBP25.56■■□□□ 1.68
NCKIPSD-209ENST00000470006 PNMA8AQ86V59 439 aaPredicted RBP25.56■■□□□ 1.68
NCKIPSD-209ENST00000470006 C7orf43Q8WVR3 580 aa25.55■■□□□ 1.68
NCKIPSD-209ENST00000470006 ABHD8Q96I13 439 aa25.55■■□□□ 1.68
NCKIPSD-209ENST00000470006 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
NCKIPSD-209ENST00000470006 ZNF652Q9Y2D9 606 aa25.55■■□□□ 1.68
NCKIPSD-209ENST00000470006 RNF123Q5XPI4 1314 aa25.55■■□□□ 1.68
NCKIPSD-209ENST00000470006 FAM177BA6PVY3 158 aa25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 BTBD11A6QL63 1104 aa25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 HSPA8P11142 646 aaKnown RBP25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 MAP2K1Q02750 393 aaPredicted RBP25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 FAM161AQ3B820 660 aa25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 CC2D1BQ5T0F9 858 aaKnown RBP25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 OLFM4Q6UX06 510 aa25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 RTKN2Q8IZC4 609 aa25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 WDR33Q9C0J8 1336 aaKnown RBP25.54■■□□□ 1.68
NCKIPSD-209ENST00000470006 RASSF10A6NK89 507 aa25.53■■□□□ 1.68
NCKIPSD-209ENST00000470006 CNGB1Q14028 1251 aaPredicted RBP25.53■■□□□ 1.68
NCKIPSD-209ENST00000470006 PAXIP1Q6ZW49 1069 aaPredicted RBP25.53■■□□□ 1.68
NCKIPSD-209ENST00000470006 BCORQ6W2J9 1755 aa25.52■■□□□ 1.68
NCKIPSD-209ENST00000470006 KCNQ3O43525 872 aa25.52■■□□□ 1.68
NCKIPSD-209ENST00000470006 TPTE2Q6XPS3 522 aa25.52■■□□□ 1.68
NCKIPSD-209ENST00000470006 IARSP41252 1262 aaKnown RBP25.51■■□□□ 1.67
NCKIPSD-209ENST00000470006 CLEC4GQ6UXB4 293 aa25.51■■□□□ 1.67
NCKIPSD-209ENST00000470006 SYNE4Q8N205 404 aa25.51■■□□□ 1.67
NCKIPSD-209ENST00000470006 SIPA1L3O60292 1781 aaPredicted RBP25.51■■□□□ 1.67
NCKIPSD-209ENST00000470006 GTF2E1P29083 439 aaPredicted RBP25.5■■□□□ 1.67
NCKIPSD-209ENST00000470006 GRM1Q13255 1194 aa25.5■■□□□ 1.67
NCKIPSD-209ENST00000470006 JDP2Q8WYK2 163 aa25.5■■□□□ 1.67
NCKIPSD-209ENST00000470006 BEGAINQ9BUH8 593 aa25.5■■□□□ 1.67
NCKIPSD-209ENST00000470006 NIP7Q9Y221 180 aaKnown RBP eCLIP25.5■■□□□ 1.67
NCKIPSD-209ENST00000470006 USP16Q9Y5T5 823 aa25.5■■□□□ 1.67
NCKIPSD-209ENST00000470006 SLC34A2O95436 690 aa25.49■■□□□ 1.67
NCKIPSD-209ENST00000470006 GJA3Q9Y6H8 435 aa25.49■■□□□ 1.67
NCKIPSD-209ENST00000470006 CCDC85CA6NKD9 419 aa25.48■■□□□ 1.67
NCKIPSD-209ENST00000470006 ALDH1B1P30837 517 aa25.48■■□□□ 1.67
NCKIPSD-209ENST00000470006 GPC2Q8N158 579 aa25.48■■□□□ 1.67
NCKIPSD-209ENST00000470006 CLSPNQ9HAW4 1339 aa25.47■■□□□ 1.67
NCKIPSD-209ENST00000470006 FZD9O00144 591 aa25.47■■□□□ 1.67
NCKIPSD-209ENST00000470006 LMOD1P29536 600 aaPredicted RBP25.47■■□□□ 1.67
NCKIPSD-209ENST00000470006 ADAMTSL1Q8N6G6 1762 aa25.46■■□□□ 1.67
NCKIPSD-209ENST00000470006 EIF6P56537 245 aaKnown RBP25.46■■□□□ 1.67
NCKIPSD-209ENST00000470006 PRAMEF22A3QJZ6 481 aa25.45■■□□□ 1.66
NCKIPSD-209ENST00000470006 DDX21Q9NR30 783 aaKnown RBP eCLIP25.45■■□□□ 1.66
NCKIPSD-209ENST00000470006 KLRG2A4D1S0 409 aaPredicted RBP25.44■■□□□ 1.66
NCKIPSD-209ENST00000470006 SNRPA1P09661 255 aaKnown RBP25.44■■□□□ 1.66
NCKIPSD-209ENST00000470006 ECE1P42892 770 aa25.43■■□□□ 1.66
NCKIPSD-209ENST00000470006 CAPNS2Q96L46 248 aa25.43■■□□□ 1.66
NCKIPSD-209ENST00000470006 MLLT1Q03111 559 aaPredicted RBP25.42■■□□□ 1.66
NCKIPSD-209ENST00000470006 CEMIPQ8WUJ3 1361 aa25.42■■□□□ 1.66
NCKIPSD-209ENST00000470006 GPR101Q96P66 508 aaPredicted RBP25.41■■□□□ 1.66
NCKIPSD-209ENST00000470006 FMR1Q06787 632 aaKnown RBP eCLIP25.4■■□□□ 1.66
NCKIPSD-209ENST00000470006 CYP4F22Q6NT55 531 aa25.4■■□□□ 1.66
NCKIPSD-209ENST00000470006 RTF1Q92541 710 aaKnown RBP25.4■■□□□ 1.66
NCKIPSD-209ENST00000470006 PHACTR3Q96KR7 559 aa25.4■■□□□ 1.66
NCKIPSD-209ENST00000470006 CFAP44Q96MT7 982 aa25.4■■□□□ 1.66
NCKIPSD-209ENST00000470006 PSMD1Q99460 953 aa25.4■■□□□ 1.66
NCKIPSD-209ENST00000470006 KIF7Q2M1P5 1343 aa25.39■■□□□ 1.66
NCKIPSD-209ENST00000470006 PRKAR2BP31323 418 aa25.39■■□□□ 1.66
NCKIPSD-209ENST00000470006 LARGE2Q8N3Y3 721 aa25.38■■□□□ 1.65
NCKIPSD-209ENST00000470006 COL3A1P02461 1466 aaPredicted RBP25.37■■□□□ 1.65
NCKIPSD-209ENST00000470006 NBPF26B4DH59 902 aa25.37■■□□□ 1.65
NCKIPSD-209ENST00000470006 EPS15P42566 896 aa25.37■■□□□ 1.65
NCKIPSD-209ENST00000470006 HLFQ16534 295 aa25.37■■□□□ 1.65
NCKIPSD-209ENST00000470006 NBPF10Q6P3W6 841 aaKnown RBP25.37■■□□□ 1.65
NCKIPSD-209ENST00000470006 NBPF15Q8N660 670 aa25.37■■□□□ 1.65
NCKIPSD-209ENST00000470006 RPGRQ92834 1020 aaKnown RBP25.37■■□□□ 1.65
NCKIPSD-209ENST00000470006 TSKSQ9UJT2 592 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms