RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 NYXQ9GZU5 481 aa17.7■□□□□ 0.42
LIMS2-213ENST00000469300 MINDY4BA8MYZ0 360 aa17.69■□□□□ 0.42
LIMS2-213ENST00000469300 PER1O15534 1290 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-213ENST00000469300 ZFYP08048 801 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-213ENST00000469300 UBE2Q2Q8WVN8 375 aa17.69■□□□□ 0.42
LIMS2-213ENST00000469300 WDHD1O75717 1129 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-213ENST00000469300 HMGN5P82970 282 aaKnown RBP17.69■□□□□ 0.42
LIMS2-213ENST00000469300 CCAR2Q8N163 923 aaKnown RBP17.69■□□□□ 0.42
LIMS2-213ENST00000469300 CCDC66A2RUB6 948 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
LIMS2-213ENST00000469300 TSPY26PQ9H489 355 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 IL15P40933 162 aaPredicted RBP17.68■□□□□ 0.42
LIMS2-213ENST00000469300 NASPP49321 788 aaPredicted RBP17.68■□□□□ 0.42
LIMS2-213ENST00000469300 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 ANKRD18AQ8IVF6 992 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 RHPN1Q8TCX5 695 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 MYO5CQ9NQX4 1742 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 CCDC192P0DO97 292 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 CALRP27797 417 aaKnown RBP17.68■□□□□ 0.42
LIMS2-213ENST00000469300 ANKRD44Q8N8A2 993 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 MBD5Q9P267 1494 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 HOXB7P09629 217 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 PDE4CQ08493 712 aa17.68■□□□□ 0.42
LIMS2-213ENST00000469300 SEC63Q9UGP8 760 aaKnown RBP17.68■□□□□ 0.42
LIMS2-213ENST00000469300 MLH3Q9UHC1 1453 aa17.67■□□□□ 0.42
LIMS2-213ENST00000469300 ANXA1P04083 346 aa17.67■□□□□ 0.42
LIMS2-213ENST00000469300 C8orf58Q8NAV2 365 aa17.67■□□□□ 0.42
LIMS2-213ENST00000469300 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
LIMS2-213ENST00000469300 CEBPZQ03701 1054 aaKnown RBP17.67■□□□□ 0.42
LIMS2-213ENST00000469300 CT47A1Q5JQC4 288 aaPredicted RBP17.67■□□□□ 0.42
LIMS2-213ENST00000469300 ZGPATQ8N5A5 531 aaKnown RBP17.67■□□□□ 0.42
LIMS2-213ENST00000469300 SPATA32Q96LK8 384 aa17.67■□□□□ 0.42
LIMS2-213ENST00000469300 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
LIMS2-213ENST00000469300 HMG20BQ9P0W2 317 aa17.67■□□□□ 0.42
LIMS2-213ENST00000469300 GSTO1P78417 241 aa17.66■□□□□ 0.42
LIMS2-213ENST00000469300 SMARCE1Q969G3 411 aa17.66■□□□□ 0.42
LIMS2-213ENST00000469300 TRIM5Q9C035 493 aa17.66■□□□□ 0.42
LIMS2-213ENST00000469300 ATP8B2P98198 1209 aa17.66■□□□□ 0.42
LIMS2-213ENST00000469300 TMEM132AQ24JP5 1023 aa17.65■□□□□ 0.42
LIMS2-213ENST00000469300 CCDC39Q9UFE4 941 aa17.65■□□□□ 0.42
LIMS2-213ENST00000469300 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
LIMS2-213ENST00000469300 ACSBG1Q96GR2 724 aa17.65■□□□□ 0.42
LIMS2-213ENST00000469300 TNMDQ9H2S6 317 aa17.65■□□□□ 0.42
LIMS2-213ENST00000469300 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
LIMS2-213ENST00000469300 RTCBQ9Y3I0 505 aaKnown RBP17.65■□□□□ 0.42
LIMS2-213ENST00000469300 MPHOSPH10O00566 681 aaKnown RBP17.65■□□□□ 0.42
LIMS2-213ENST00000469300 BTG4Q9NY30 223 aa17.65■□□□□ 0.42
LIMS2-213ENST00000469300 GOLIM4O00461 696 aa17.64■□□□□ 0.42
LIMS2-213ENST00000469300 VAMP4O75379 141 aa17.64■□□□□ 0.42
LIMS2-213ENST00000469300 MEIS3Q99687 375 aa17.64■□□□□ 0.42
LIMS2-213ENST00000469300 SBNO2Q9Y2G9 1366 aa17.64■□□□□ 0.41
LIMS2-213ENST00000469300 ZNF76P36508 570 aa17.64■□□□□ 0.41
LIMS2-213ENST00000469300 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
LIMS2-213ENST00000469300 ATP2B3Q16720 1220 aa17.64■□□□□ 0.41
LIMS2-213ENST00000469300 DZIP3Q86Y13 1208 aaKnown RBP17.64■□□□□ 0.41
LIMS2-213ENST00000469300 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
LIMS2-213ENST00000469300 SLAIN2Q9P270 581 aa17.64■□□□□ 0.41
LIMS2-213ENST00000469300 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
LIMS2-213ENST00000469300 LIMCH1Q9UPQ0 1083 aa17.64■□□□□ 0.41
LIMS2-213ENST00000469300 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.41
LIMS2-213ENST00000469300 NOM1Q5C9Z4 860 aaKnown RBP17.63■□□□□ 0.41
LIMS2-213ENST00000469300 NIP7Q9Y221 180 aaKnown RBP eCLIP17.63■□□□□ 0.41
LIMS2-213ENST00000469300 CCP110O43303 1012 aa17.63■□□□□ 0.41
LIMS2-213ENST00000469300 ODF2Q5BJF6 829 aa17.63■□□□□ 0.41
LIMS2-213ENST00000469300 ZNF592Q92610 1267 aa17.63■□□□□ 0.41
LIMS2-213ENST00000469300 UPF3BQ9BZI7 483 aaKnown RBP17.63■□□□□ 0.41
LIMS2-213ENST00000469300 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
LIMS2-213ENST00000469300 RANBP6O60518 1105 aaKnown RBP17.63■□□□□ 0.41
LIMS2-213ENST00000469300 PDE4BQ07343 736 aa17.63■□□□□ 0.41
LIMS2-213ENST00000469300 LMBR1LQ6UX01 489 aa17.63■□□□□ 0.41
LIMS2-213ENST00000469300 ADGBQ8N7X0 1667 aa17.63■□□□□ 0.41
LIMS2-213ENST00000469300 PPP4R3BQ5MIZ7 849 aa17.62■□□□□ 0.41
LIMS2-213ENST00000469300 TTC22Q5TAA0 569 aa17.62■□□□□ 0.41
LIMS2-213ENST00000469300 NAP1L1P55209 391 aaKnown RBP17.62■□□□□ 0.41
LIMS2-213ENST00000469300 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.41
LIMS2-213ENST00000469300 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
LIMS2-213ENST00000469300 PDILTQ8N807 584 aa17.62■□□□□ 0.41
LIMS2-213ENST00000469300 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
LIMS2-213ENST00000469300 IFIT3O14879 490 aaKnown RBP17.61■□□□□ 0.41
LIMS2-213ENST00000469300 IL13P35225 146 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 TNIP1Q15025 636 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 CATIPQ7Z7H3 387 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 RNF214Q8ND24 703 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 MAGI3Q5TCQ9 1506 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 NUCB1Q02818 461 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 CRNKL1Q9BZJ0 848 aaKnown RBP17.61■□□□□ 0.41
LIMS2-213ENST00000469300 PRM3Q9NNZ6 103 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 KIF5BP33176 963 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 CCDC178Q5BJE1 867 aa17.61■□□□□ 0.41
LIMS2-213ENST00000469300 LUC7LQ9NQ29 371 aaKnown RBP17.6■□□□□ 0.41
LIMS2-213ENST00000469300 ZNHIT6Q9NWK9 470 aaKnown RBP17.6■□□□□ 0.41
LIMS2-213ENST00000469300 SMC2O95347 1197 aa17.6■□□□□ 0.41
LIMS2-213ENST00000469300 CCDC173Q0VFZ6 552 aa17.6■□□□□ 0.41
LIMS2-213ENST00000469300 C8orf76Q96K31 380 aa17.6■□□□□ 0.41
LIMS2-213ENST00000469300 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
LIMS2-213ENST00000469300 LTKP29376 864 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 NBPF14Q5TI25 921 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 CCDC12Q8WUD4 166 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms