RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 HFM1A2PYH4 1435 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
SF3B1-207ENST00000468925 LRPPRCP42704 1394 aaKnown RBP6.06□□□□□ -1.44
SF3B1-207ENST00000468925 SENP3-EIF4A1A0A087X0R7 540 aa6.05□□□□□ -1.44
SF3B1-207ENST00000468925 CCDC66A2RUB6 948 aa6.05□□□□□ -1.44
SF3B1-207ENST00000468925 HSPA5P11021 654 aaKnown RBP6.05□□□□□ -1.44
SF3B1-207ENST00000468925 TMEM259Q4ZIN3 620 aa6.05□□□□□ -1.44
SF3B1-207ENST00000468925 PROSER2Q86WR7 435 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-207ENST00000468925 WHAMMQ8TF30 809 aa6.05□□□□□ -1.44
SF3B1-207ENST00000468925 GJD4Q96KN9 370 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-207ENST00000468925 SIN3AQ96ST3 1273 aa6.05□□□□□ -1.44
SF3B1-207ENST00000468925 LRRC9Q6ZRR7 1453 aa6.04□□□□□ -1.44
SF3B1-207ENST00000468925 K7ELQ4 463 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-207ENST00000468925 CLGNO14967 610 aa6.04□□□□□ -1.44
SF3B1-207ENST00000468925 MCM6Q14566 821 aa6.04□□□□□ -1.44
SF3B1-207ENST00000468925 KANK4Q5T7N3 995 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-207ENST00000468925 SASS6Q6UVJ0 657 aa6.04□□□□□ -1.44
SF3B1-207ENST00000468925 SV2AQ7L0J3 742 aa6.04□□□□□ -1.44
SF3B1-207ENST00000468925 PRIMPOLQ96LW4 560 aa6.04□□□□□ -1.44
SF3B1-207ENST00000468925 CUEDC1Q9NWM3 386 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-207ENST00000468925 POGKQ9P215 609 aa6.04□□□□□ -1.44
SF3B1-207ENST00000468925 FMN1Q68DA7 1419 aa6.04□□□□□ -1.44
SF3B1-207ENST00000468925 KDM2BQ8NHM5 1336 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 MYOM3Q5VTT5 1437 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 GOLGA6L22H0YM25 854 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 C8orf34Q49A92 452 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 LYSMD3Q7Z3D4 306 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 PDCL2Q8N4E4 241 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 EXOC6Q8TAG9 804 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 PNISRQ8TF01 805 aaKnown RBP6.03□□□□□ -1.44
SF3B1-207ENST00000468925 SCARF2Q96GP6 870 aaPredicted RBP6.03□□□□□ -1.44
SF3B1-207ENST00000468925 GBP4Q96PP9 640 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 ANTXR1Q9H6X2 564 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 YY1AP1Q9H869 796 aa6.03□□□□□ -1.44
SF3B1-207ENST00000468925 ATP5J2-PTCD1G3V325 749 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 GPR25O00155 361 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 SCTRP47872 440 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 RIPOR1Q6ZS17 1223 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 TMC1Q8TDI8 760 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 FEZ1Q99689 392 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 SNRKQ9NRH2 765 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 RAB6BQ9NRW1 208 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 NOL7Q9UMY1 257 aaKnown RBP6.02□□□□□ -1.45
SF3B1-207ENST00000468925 PCDHB11Q9Y5F2 797 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 KIF15Q9NS87 1388 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 ARHGAP35Q9NRY4 1499 aa6.02□□□□□ -1.45
SF3B1-207ENST00000468925 CFAP43Q8NDM7 1665 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 TOP2BQ02880 1626 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 SLURP2P0DP57 97 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 ZSCAN20P17040 1043 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-207ENST00000468925 IRX3P78415 501 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-207ENST00000468925 GABPB1Q06547 395 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-207ENST00000468925 NBPF1Q3BBV0 1214 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 DNTTIP2Q5QJE6 756 aaKnown RBP6.01□□□□□ -1.45
SF3B1-207ENST00000468925 FNBP4Q8N3X1 1017 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-207ENST00000468925 NGEFQ8N5V2 710 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 MTMR14Q8NCE2 650 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 NANOS1Q8WY41 292 aaKnown RBP6.01□□□□□ -1.45
SF3B1-207ENST00000468925 GAS2L1Q99501 681 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-207ENST00000468925 GOPCQ9HD26 462 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 FAM13BQ9NYF5 915 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 KIF3AQ9Y496 699 aa6.01□□□□□ -1.45
SF3B1-207ENST00000468925 KIAA1107Q9UPP5 1409 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 KDM5BQ9UGL1 1544 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 NESP48681 1621 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 SMARCA4P51532 1647 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 UQCRHLA0A096LP55 91 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 A0A1W2PRU2 124 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 UQCRHP07919 91 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 GTF2F1P35269 517 aaKnown RBP eCLIP6□□□□□ -1.45
SF3B1-207ENST00000468925 MARSP56192 900 aaKnown RBP6□□□□□ -1.45
SF3B1-207ENST00000468925 RIPK4P57078 832 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 POU4F2Q12837 409 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 NR1H3Q13133 447 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 SLC27A3Q5K4L6 730 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 CTR9Q6PD62 1173 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 SEPT12Q8IYM1 358 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 DCAF5Q96JK2 942 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 ARHGEF10LQ9HCE6 1279 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 TMEM51Q9NW97 253 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 ANKRD30AQ9BXX3 1397 aa6□□□□□ -1.45
SF3B1-207ENST00000468925 AQRO60306 1485 aaKnown RBP eCLIP6□□□□□ -1.453e-7■■■■□ 23.2
SF3B1-207ENST00000468925 MYBBP1AQ9BQG0 1328 aaKnown RBP5.99□□□□□ -1.45
SF3B1-207ENST00000468925 SPATA31E1Q6ZUB1 1445 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 RIMBP3CA6NJZ7 1639 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 RIMBP3BA6NNM3 1639 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 HECW1Q76N89 1606 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 RIMBP3Q9UFD9 1639 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 CTTNBP2Q8WZ74 1663 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 ADAMTS2O95450 1211 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 PTMAP06454 111 aaKnown RBP5.99□□□□□ -1.45
SF3B1-207ENST00000468925 MMP14P50281 582 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 CC2D2BQ6DHV5 1058 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 FAM177A1Q8N128 213 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-207ENST00000468925 ZNF622Q969S3 477 aaKnown RBP eCLIP5.99□□□□□ -1.451e-16■□□□□ 8.2
SF3B1-207ENST00000468925 NLRP3Q96P20 1036 aa5.99□□□□□ -1.45
SF3B1-207ENST00000468925 SLKQ9H2G2 1235 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-207ENST00000468925 ESF1Q9H501 851 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms