RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 PROSER3Q2NL68 480 aa12.29□□□□□ -0.44
SDCCAG3-208ENST00000466579 HDGFL1Q5TGJ6 251 aa12.29□□□□□ -0.44
SDCCAG3-208ENST00000466579 TBC1D9BQ66K14 1250 aa12.29□□□□□ -0.44
SDCCAG3-208ENST00000466579 ZNF330Q9Y3S2 320 aaPredicted RBP12.29□□□□□ -0.44
SDCCAG3-208ENST00000466579 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
SDCCAG3-208ENST00000466579 BRCA1P38398 1863 aaKnown RBP12.29□□□□□ -0.44
SDCCAG3-208ENST00000466579 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 SENP3-EIF4A1A0A087X0R7 540 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 TGFB2P61812 414 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 CHMP4AQ9BY43 222 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 CARMIL3Q8ND23 1372 aa12.28□□□□□ -0.44
SDCCAG3-208ENST00000466579 CACNA1FO60840 1977 aa12.27□□□□□ -0.44
SDCCAG3-208ENST00000466579 SERPINB2P05120 415 aa12.27□□□□□ -0.45
SDCCAG3-208ENST00000466579 MYL6BP14649 208 aa12.27□□□□□ -0.45
SDCCAG3-208ENST00000466579 HLFQ16534 295 aa12.27□□□□□ -0.45
SDCCAG3-208ENST00000466579 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
SDCCAG3-208ENST00000466579 CHPF2Q9P2E5 772 aa12.27□□□□□ -0.45
SDCCAG3-208ENST00000466579 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
SDCCAG3-208ENST00000466579 ANKRD31Q8N7Z5 1873 aa12.27□□□□□ -0.45
SDCCAG3-208ENST00000466579 ANKRD36CQ5JPF3 1778 aa12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 DLEC1Q9Y238 1755 aa12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 ANXA1P04083 346 aa12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 KIF6Q6ZMV9 814 aa12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 GOLGB1Q14789 3259 aaKnown RBP12.26□□□□□ -0.45
SDCCAG3-208ENST00000466579 KCNA3P22001 575 aa12.25□□□□□ -0.45
SDCCAG3-208ENST00000466579 COPS6Q7L5N1 327 aa12.25□□□□□ -0.45
SDCCAG3-208ENST00000466579 ZNF34Q8IZ26 560 aa12.25□□□□□ -0.45
SDCCAG3-208ENST00000466579 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
SDCCAG3-208ENST00000466579 XAGE3Q8WTP9 111 aa12.25□□□□□ -0.45
SDCCAG3-208ENST00000466579 NECTIN2Q92692 538 aa12.25□□□□□ -0.45
SDCCAG3-208ENST00000466579 MYH16Q9H6N6 1097 aa12.25□□□□□ -0.45
SDCCAG3-208ENST00000466579 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
SDCCAG3-208ENST00000466579 ELL2O00472 640 aaPredicted RBP12.24□□□□□ -0.45
SDCCAG3-208ENST00000466579 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
SDCCAG3-208ENST00000466579 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
SDCCAG3-208ENST00000466579 CCDC30Q5VVM6 783 aa12.24□□□□□ -0.45
SDCCAG3-208ENST00000466579 PRR5LQ6MZQ0 368 aa12.24□□□□□ -0.45
SDCCAG3-208ENST00000466579 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
SDCCAG3-208ENST00000466579 UTRNP46939 3433 aa12.24□□□□□ -0.45
SDCCAG3-208ENST00000466579 RIC1Q4ADV7 1423 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 VAMP4O75379 141 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 DPEP1P16444 411 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 PLBD2Q8NHP8 589 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 BRIP1Q9BX63 1249 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 ZBTB3Q9H5J0 574 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 PDZRN3Q9UPQ7 1066 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 ARFGEF2Q9Y6D5 1785 aa12.23□□□□□ -0.45
SDCCAG3-208ENST00000466579 UBN2Q6ZU65 1347 aa12.22□□□□□ -0.45
SDCCAG3-208ENST00000466579 KLRG2A4D1S0 409 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-208ENST00000466579 E9PSI1 815 aa12.22□□□□□ -0.45
SDCCAG3-208ENST00000466579 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
SDCCAG3-208ENST00000466579 EXOSC9Q06265 439 aaKnown RBP12.22□□□□□ -0.45
SDCCAG3-208ENST00000466579 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
SDCCAG3-208ENST00000466579 CNBD1Q8NA66 436 aa12.22□□□□□ -0.45
SDCCAG3-208ENST00000466579 COL11A2P13942 1736 aaPredicted RBP12.22□□□□□ -0.45
SDCCAG3-208ENST00000466579 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
SDCCAG3-208ENST00000466579 TCIRG1Q13488 830 aa12.21□□□□□ -0.45
SDCCAG3-208ENST00000466579 PARP10Q53GL7 1025 aa12.21□□□□□ -0.45
SDCCAG3-208ENST00000466579 HSP90AB3PQ58FF7 597 aa12.21□□□□□ -0.45
SDCCAG3-208ENST00000466579 TPTE2Q6XPS3 522 aa12.21□□□□□ -0.45
SDCCAG3-208ENST00000466579 ANKRD13DQ6ZTN6 518 aa12.21□□□□□ -0.45
SDCCAG3-208ENST00000466579 NBPF5PQ86XG9 351 aaPredicted RBP12.21□□□□□ -0.45
SDCCAG3-208ENST00000466579 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
SDCCAG3-208ENST00000466579 CHD4Q14839 1912 aa12.21□□□□□ -0.46
SDCCAG3-208ENST00000466579 RNF123Q5XPI4 1314 aa12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 GRIN3BO60391 1043 aa12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 NTSR2O95665 410 aa12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 ST5P78524 1137 aa12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 AIMP1Q12904 312 aaKnown RBP12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 TRIM28Q13263 835 aaKnown RBP12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 GPR162Q16538 588 aa12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 ISCA1Q9BUE6 129 aa12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
SDCCAG3-208ENST00000466579 CHRNA5P30532 468 aa12.19□□□□□ -0.46
SDCCAG3-208ENST00000466579 PDE6BP35913 854 aa12.19□□□□□ -0.46
SDCCAG3-208ENST00000466579 SUSD4Q5VX71 490 aa12.19□□□□□ -0.46
SDCCAG3-208ENST00000466579 PIM2Q9P1W9 311 aa12.19□□□□□ -0.46
SDCCAG3-208ENST00000466579 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
SDCCAG3-208ENST00000466579 GPTP24298 496 aa12.18□□□□□ -0.46
SDCCAG3-208ENST00000466579 SLC10A5Q5PT55 438 aa12.18□□□□□ -0.46
SDCCAG3-208ENST00000466579 PPP1R42Q7Z4L9 355 aa12.18□□□□□ -0.46
SDCCAG3-208ENST00000466579 NLRP10Q86W26 655 aa12.18□□□□□ -0.46
SDCCAG3-208ENST00000466579 C2CD5Q86YS7 1000 aa12.18□□□□□ -0.46
SDCCAG3-208ENST00000466579 STK31Q9BXU1 1019 aa12.18□□□□□ -0.46
SDCCAG3-208ENST00000466579 ADCY9O60503 1353 aa12.18□□□□□ -0.46
SDCCAG3-208ENST00000466579 ABCC12Q96J65 1359 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms