RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 LAMB2P55268 1798 aa16.77■□□□□ 0.27
COL5A1-206ENST00000465877 RGL2O15211 777 aa16.76■□□□□ 0.27
COL5A1-206ENST00000465877 SERPINB2P05120 415 aa16.76■□□□□ 0.27
COL5A1-206ENST00000465877 GPR162Q16538 588 aa16.76■□□□□ 0.27
COL5A1-206ENST00000465877 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
COL5A1-206ENST00000465877 KIF6Q6ZMV9 814 aa16.76■□□□□ 0.27
COL5A1-206ENST00000465877 LRP10Q7Z4F1 713 aa16.76■□□□□ 0.27
COL5A1-206ENST00000465877 NECTIN2Q92692 538 aa16.76■□□□□ 0.27
COL5A1-206ENST00000465877 IL16Q14005 1332 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 MAP3K15Q6ZN16 1313 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 ANXA1P04083 346 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL5A1-206ENST00000465877 TGFB2P61812 414 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 PDIA6Q15084 440 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 CLEC4GQ6UXB4 293 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 TTLL7Q6ZT98 887 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 NGEFQ8N5V2 710 aa16.75■□□□□ 0.27
COL5A1-206ENST00000465877 DUSP27Q5VZP5 1158 aa16.74■□□□□ 0.27
COL5A1-206ENST00000465877 TSR2Q969E8 191 aaKnown RBP16.74■□□□□ 0.27
COL5A1-206ENST00000465877 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
COL5A1-206ENST00000465877 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
COL5A1-206ENST00000465877 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
COL5A1-206ENST00000465877 DPEP1P16444 411 aa16.73■□□□□ 0.27
COL5A1-206ENST00000465877 HLFQ16534 295 aa16.73■□□□□ 0.27
COL5A1-206ENST00000465877 DIEXFQ68CQ4 756 aaKnown RBP16.73■□□□□ 0.27
COL5A1-206ENST00000465877 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
COL5A1-206ENST00000465877 SETDB2Q96T68 719 aa16.73■□□□□ 0.27
COL5A1-206ENST00000465877 ZBTB3Q9H5J0 574 aa16.73■□□□□ 0.27
COL5A1-206ENST00000465877 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL5A1-206ENST00000465877 DDX60Q8IY21 1712 aaKnown RBP16.73■□□□□ 0.27
COL5A1-206ENST00000465877 FANCIQ9NVI1 1328 aa16.72■□□□□ 0.27
COL5A1-206ENST00000465877 ERVV-1B6SEH8 477 aa16.72■□□□□ 0.27
COL5A1-206ENST00000465877 PRR5LQ6MZQ0 368 aa16.72■□□□□ 0.27
COL5A1-206ENST00000465877 NIP7Q9Y221 180 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL5A1-206ENST00000465877 IBTKQ9P2D0 1353 aaPredicted RBP16.72■□□□□ 0.27
COL5A1-206ENST00000465877 A0A0G2JLW4 131 aa16.71■□□□□ 0.27
COL5A1-206ENST00000465877 C8orf58Q8NAV2 365 aa16.71■□□□□ 0.27
COL5A1-206ENST00000465877 NPHP1O15259 732 aa16.7■□□□□ 0.26
COL5A1-206ENST00000465877 CHRNA5P30532 468 aa16.7■□□□□ 0.26
COL5A1-206ENST00000465877 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
COL5A1-206ENST00000465877 DBF4Q9UBU7 674 aaPredicted RBP16.7■□□□□ 0.26
COL5A1-206ENST00000465877 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
COL5A1-206ENST00000465877 UBN2Q6ZU65 1347 aa16.7■□□□□ 0.26
COL5A1-206ENST00000465877 ELL2O00472 640 aaPredicted RBP16.69■□□□□ 0.26
COL5A1-206ENST00000465877 GRIN3BO60391 1043 aa16.69■□□□□ 0.26
COL5A1-206ENST00000465877 ST5P78524 1137 aa16.69■□□□□ 0.26
COL5A1-206ENST00000465877 NBPF5PQ86XG9 351 aaPredicted RBP16.69■□□□□ 0.26
COL5A1-206ENST00000465877 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
COL5A1-206ENST00000465877 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
COL5A1-206ENST00000465877 ZNF521Q96K83 1311 aa16.69■□□□□ 0.26
COL5A1-206ENST00000465877 ABCC12Q96J65 1359 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 SBF1O95248 1867 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 FER1L6Q2WGJ9 1857 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 KCNA3P22001 575 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
COL5A1-206ENST00000465877 COPS6Q7L5N1 327 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 TSPYL6Q8N831 410 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 BCS1LQ9Y276 419 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
COL5A1-206ENST00000465877 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
COL5A1-206ENST00000465877 GPTP24298 496 aa16.67■□□□□ 0.26
COL5A1-206ENST00000465877 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
COL5A1-206ENST00000465877 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
COL5A1-206ENST00000465877 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-206ENST00000465877 C2CD5Q86YS7 1000 aa16.66■□□□□ 0.26
COL5A1-206ENST00000465877 BRIP1Q9BX63 1249 aa16.66■□□□□ 0.26
COL5A1-206ENST00000465877 HYPKQ9NX55 129 aa16.66■□□□□ 0.26
COL5A1-206ENST00000465877 PIM2Q9P1W9 311 aa16.66■□□□□ 0.26
COL5A1-206ENST00000465877 YY1P25490 414 aa16.65■□□□□ 0.26
COL5A1-206ENST00000465877 PDE6BP35913 854 aa16.65■□□□□ 0.26
COL5A1-206ENST00000465877 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
COL5A1-206ENST00000465877 NYXQ9GZU5 481 aa16.65■□□□□ 0.26
COL5A1-206ENST00000465877 SPINK5Q9NQ38 1064 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-206ENST00000465877 MYH3P11055 1940 aa16.64■□□□□ 0.26
COL5A1-206ENST00000465877 H0YIN7 160 aa16.64■□□□□ 0.25
COL5A1-206ENST00000465877 NTSR2O95665 410 aa16.64■□□□□ 0.25
COL5A1-206ENST00000465877 HSP90AB3PQ58FF7 597 aa16.64■□□□□ 0.25
COL5A1-206ENST00000465877 DALRD3Q5D0E6 543 aaKnown RBP16.64■□□□□ 0.25
COL5A1-206ENST00000465877 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
COL5A1-206ENST00000465877 TPTE2Q6XPS3 522 aa16.64■□□□□ 0.25
COL5A1-206ENST00000465877 MIER1Q8N108 512 aa16.64■□□□□ 0.25
COL5A1-206ENST00000465877 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
COL5A1-206ENST00000465877 DICER1Q9UPY3 1922 aaKnown RBP16.64■□□□□ 0.25
COL5A1-206ENST00000465877 PARP10Q53GL7 1025 aa16.63■□□□□ 0.25
COL5A1-206ENST00000465877 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
COL5A1-206ENST00000465877 CHMP4AQ9BY43 222 aa16.63■□□□□ 0.25
COL5A1-206ENST00000465877 MYH16Q9H6N6 1097 aa16.63■□□□□ 0.25
COL5A1-206ENST00000465877 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
COL5A1-206ENST00000465877 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
COL5A1-206ENST00000465877 NUTM1Q86Y26 1132 aa16.62■□□□□ 0.25
COL5A1-206ENST00000465877 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
COL5A1-206ENST00000465877 GTF2E1P29083 439 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-206ENST00000465877 ERFEQ4G0M1 354 aa16.61■□□□□ 0.25
COL5A1-206ENST00000465877 SUSD4Q5VX71 490 aa16.61■□□□□ 0.25
COL5A1-206ENST00000465877 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
COL5A1-206ENST00000465877 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
COL5A1-206ENST00000465877 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms