RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 KRT24Q2M2I5 525 aa28.55■■■□□ 2.16
LIME1-203ENST00000465591 CNBD1Q8NA66 436 aa28.55■■■□□ 2.16
LIME1-203ENST00000465591 BRIP1Q9BX63 1249 aa28.55■■■□□ 2.16
LIME1-203ENST00000465591 ZNF652Q9Y2D9 606 aa28.55■■■□□ 2.16
LIME1-203ENST00000465591 SBF1O95248 1867 aa28.55■■■□□ 2.16
LIME1-203ENST00000465591 H0YIN7 160 aa28.53■■■□□ 2.16
LIME1-203ENST00000465591 APAF1O14727 1248 aa28.53■■■□□ 2.16
LIME1-203ENST00000465591 RGL2O15211 777 aa28.53■■■□□ 2.16
LIME1-203ENST00000465591 PDIA6Q15084 440 aa28.53■■■□□ 2.16
LIME1-203ENST00000465591 LRP10Q7Z4F1 713 aa28.53■■■□□ 2.16
LIME1-203ENST00000465591 NIP7Q9Y221 180 aaKnown RBP eCLIP28.53■■■□□ 2.16
LIME1-203ENST00000465591 LAS1LQ9Y4W2 734 aaKnown RBP28.53■■■□□ 2.16
LIME1-203ENST00000465591 EIF2S2P20042 333 aaKnown RBP28.52■■■□□ 2.16
LIME1-203ENST00000465591 ZNF526Q8TF50 670 aaPredicted RBP28.52■■■□□ 2.16
LIME1-203ENST00000465591 MAP3K15Q6ZN16 1313 aa28.51■■■□□ 2.15
LIME1-203ENST00000465591 PROSER3Q2NL68 480 aa28.51■■■□□ 2.15
LIME1-203ENST00000465591 NBPF5PQ86XG9 351 aaPredicted RBP28.51■■■□□ 2.15
LIME1-203ENST00000465591 TTLL6Q8N841 843 aa28.51■■■□□ 2.15
LIME1-203ENST00000465591 CACNA1SQ13698 1873 aa28.51■■■□□ 2.15
LIME1-203ENST00000465591 ERBB4Q15303 1308 aa28.5■■■□□ 2.15
LIME1-203ENST00000465591 ANXA1P04083 346 aa28.5■■■□□ 2.15
LIME1-203ENST00000465591 PDE6BP35913 854 aa28.5■■■□□ 2.15
LIME1-203ENST00000465591 FAM177BA6PVY3 158 aa28.49■■■□□ 2.15
LIME1-203ENST00000465591 ST5P78524 1137 aa28.49■■■□□ 2.15
LIME1-203ENST00000465591 ERVV-1B6SEH8 477 aa28.48■■■□□ 2.15
LIME1-203ENST00000465591 NPHP1O15259 732 aa28.48■■■□□ 2.15
LIME1-203ENST00000465591 C9orf131Q5VYM1 1079 aa28.48■■■□□ 2.15
LIME1-203ENST00000465591 NECTIN2Q92692 538 aa28.48■■■□□ 2.15
LIME1-203ENST00000465591 ZNF622Q969S3 477 aaKnown RBP eCLIP28.48■■■□□ 2.15
LIME1-203ENST00000465591 ZBTB3Q9H5J0 574 aa28.48■■■□□ 2.15
LIME1-203ENST00000465591 SLX4Q8IY92 1834 aa28.48■■■□□ 2.15
LIME1-203ENST00000465591 RASSF7Q02833 373 aa28.47■■■□□ 2.15
LIME1-203ENST00000465591 KIF6Q6ZMV9 814 aa28.47■■■□□ 2.15
LIME1-203ENST00000465591 GPBP1L1Q9HC44 474 aaPredicted RBP28.47■■■□□ 2.15
LIME1-203ENST00000465591 C1QTNF8P60827 252 aa28.46■■■□□ 2.15
LIME1-203ENST00000465591 CCDC88AQ3V6T2 1871 aa28.45■■■□□ 2.15
LIME1-203ENST00000465591 PRELPP51888 382 aa28.45■■■□□ 2.14
LIME1-203ENST00000465591 CFAP44Q96MT7 982 aa28.45■■■□□ 2.14
LIME1-203ENST00000465591 PDZRN3Q9UPQ7 1066 aa28.45■■■□□ 2.14
LIME1-203ENST00000465591 TNRC6CQ9HCJ0 1690 aaKnown RBP28.45■■■□□ 2.14
LIME1-203ENST00000465591 ARFGEF2Q9Y6D5 1785 aa28.45■■■□□ 2.14
LIME1-203ENST00000465591 SRGNP10124 158 aa28.44■■■□□ 2.14
LIME1-203ENST00000465591 UBN2Q6ZU65 1347 aa28.43■■■□□ 2.14
LIME1-203ENST00000465591 SENP3-EIF4A1A0A087X0R7 540 aa28.43■■■□□ 2.14
LIME1-203ENST00000465591 ZNF853P0CG23 659 aa28.43■■■□□ 2.14
LIME1-203ENST00000465591 TPTE2Q6XPS3 522 aa28.43■■■□□ 2.14
LIME1-203ENST00000465591 MBIPQ9NS73 344 aa28.43■■■□□ 2.14
LIME1-203ENST00000465591 ABCC12Q96J65 1359 aa28.42■■■□□ 2.14
LIME1-203ENST00000465591 GPTP24298 496 aa28.42■■■□□ 2.14
LIME1-203ENST00000465591 RNF181Q9P0P0 153 aa28.42■■■□□ 2.14
LIME1-203ENST00000465591 ZNF219Q9P2Y4 722 aaPredicted RBP28.42■■■□□ 2.14
LIME1-203ENST00000465591 FER1L6Q2WGJ9 1857 aa28.42■■■□□ 2.14
LIME1-203ENST00000465591 NFKBIEO00221 500 aa28.41■■■□□ 2.14
LIME1-203ENST00000465591 STYK1Q6J9G0 422 aa28.41■■■□□ 2.14
LIME1-203ENST00000465591 KLRG2A4D1S0 409 aaPredicted RBP28.4■■■□□ 2.14
LIME1-203ENST00000465591 ANP32CO43423 234 aa28.4■■■□□ 2.14
LIME1-203ENST00000465591 C21orf2O43822 256 aa28.4■■■□□ 2.14
LIME1-203ENST00000465591 GIGYF2Q6Y7W6 1299 aaKnown RBP28.4■■■□□ 2.14
LIME1-203ENST00000465591 NUTM1Q86Y26 1132 aa28.4■■■□□ 2.14
LIME1-203ENST00000465591 ZNF34Q8IZ26 560 aa28.4■■■□□ 2.14
LIME1-203ENST00000465591 MASTLQ96GX5 879 aa28.39■■■□□ 2.14
LIME1-203ENST00000465591 SUSD4Q5VX71 490 aa28.38■■■□□ 2.13
LIME1-203ENST00000465591 PRPF40BQ6NWY9 871 aaKnown RBP28.38■■■□□ 2.13
LIME1-203ENST00000465591 COPS6Q7L5N1 327 aa28.38■■■□□ 2.13
LIME1-203ENST00000465591 XAGE3Q8WTP9 111 aa28.38■■■□□ 2.13
LIME1-203ENST00000465591 MRS2Q9HD23 443 aa28.38■■■□□ 2.13
LIME1-203ENST00000465591 DDX21Q9NR30 783 aaKnown RBP eCLIP28.38■■■□□ 2.13
LIME1-203ENST00000465591 CHPF2Q9P2E5 772 aa28.38■■■□□ 2.13
LIME1-203ENST00000465591 ANKRD36CQ5JPF3 1778 aa28.37■■■□□ 2.13
LIME1-203ENST00000465591 AIMP1Q12904 312 aaKnown RBP28.37■■■□□ 2.13
LIME1-203ENST00000465591 ERFEQ4G0M1 354 aa28.37■■■□□ 2.13
LIME1-203ENST00000465591 CNKSR1Q969H4 720 aa28.37■■■□□ 2.13
LIME1-203ENST00000465591 IFT57Q9NWB7 429 aa28.37■■■□□ 2.13
LIME1-203ENST00000465591 KIF3CO14782 793 aa28.36■■■□□ 2.13
LIME1-203ENST00000465591 HDGFL1Q5TGJ6 251 aa28.36■■■□□ 2.13
LIME1-203ENST00000465591 DUSP27Q5VZP5 1158 aa28.36■■■□□ 2.13
LIME1-203ENST00000465591 HOXB7P09629 217 aa28.35■■■□□ 2.13
LIME1-203ENST00000465591 GTF2E1P29083 439 aaPredicted RBP28.35■■■□□ 2.13
LIME1-203ENST00000465591 NYXQ9GZU5 481 aa28.35■■■□□ 2.13
LIME1-203ENST00000465591 IBTKQ9P2D0 1353 aaPredicted RBP28.35■■■□□ 2.13
LIME1-203ENST00000465591 NTSR2O95665 410 aa28.34■■■□□ 2.13
LIME1-203ENST00000465591 NPR1P16066 1061 aa28.34■■■□□ 2.13
LIME1-203ENST00000465591 TIAM2Q8IVF5 1701 aa28.34■■■□□ 2.13
LIME1-203ENST00000465591 LMNB1P20700 586 aa28.33■■■□□ 2.13
LIME1-203ENST00000465591 GNAI1P63096 354 aa28.33■■■□□ 2.13
LIME1-203ENST00000465591 C7orf43Q8WVR3 580 aa28.33■■■□□ 2.13
LIME1-203ENST00000465591 NMRK2Q9NPI5 230 aa28.33■■■□□ 2.13
LIME1-203ENST00000465591 DICER1Q9UPY3 1922 aaKnown RBP28.32■■■□□ 2.12
LIME1-203ENST00000465591 CALD1Q05682 793 aaKnown RBP28.31■■■□□ 2.12
LIME1-203ENST00000465591 RIC1Q4ADV7 1423 aa28.3■■■□□ 2.12
LIME1-203ENST00000465591 ELL2O00472 640 aaPredicted RBP28.3■■■□□ 2.12
LIME1-203ENST00000465591 CRY2Q49AN0 593 aa28.3■■■□□ 2.12
LIME1-203ENST00000465591 PARP10Q53GL7 1025 aa28.29■■■□□ 2.12
LIME1-203ENST00000465591 OLFM4Q6UX06 510 aa28.29■■■□□ 2.12
LIME1-203ENST00000465591 C3orf67Q6ZVT6 689 aa28.29■■■□□ 2.12
LIME1-203ENST00000465591 C8orf58Q8NAV2 365 aa28.29■■■□□ 2.12
LIME1-203ENST00000465591 DBF4Q9UBU7 674 aaPredicted RBP28.28■■■□□ 2.12
LIME1-203ENST00000465591 CCDC27Q2M243 656 aa28.27■■■□□ 2.12
LIME1-203ENST00000465591 WWC1Q8IX03 1113 aa28.27■■■□□ 2.12
LIME1-203ENST00000465591 LTBP3Q9NS15 1303 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms