RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 ZDHHC1Q8WTX9 485 aa6.78□□□□□ -1.32
GARNL3-213ENST00000464616 CHMP7Q8WUX9 453 aaPredicted RBP6.78□□□□□ -1.32
GARNL3-213ENST00000464616 CLUAP1Q96AJ1 413 aa6.78□□□□□ -1.32
GARNL3-213ENST00000464616 CALR3Q96L12 384 aaKnown RBP6.78□□□□□ -1.32
GARNL3-213ENST00000464616 CEP63Q96MT8 703 aa6.78□□□□□ -1.32
GARNL3-213ENST00000464616 SPOCK3Q9BQ16 436 aa6.78□□□□□ -1.32
GARNL3-213ENST00000464616 CLDN10P78369 228 aa6.77□□□□□ -1.33
GARNL3-213ENST00000464616 ADAMTS19Q8TE59 1207 aa6.77□□□□□ -1.33
GARNL3-213ENST00000464616 GLMNQ92990 594 aa6.77□□□□□ -1.33
GARNL3-213ENST00000464616 HINFPQ9BQA5 517 aa6.77□□□□□ -1.33
GARNL3-213ENST00000464616 TSPAN10Q9H1Z9 355 aaPredicted RBP6.77□□□□□ -1.33
GARNL3-213ENST00000464616 SPDYE3A6NKU9 549 aa6.76□□□□□ -1.33
GARNL3-213ENST00000464616 SFI1A8K8P3 1242 aa6.76□□□□□ -1.33
GARNL3-213ENST00000464616 EML1O00423 815 aa6.76□□□□□ -1.33
GARNL3-213ENST00000464616 ZBTB7BO15156 539 aaPredicted RBP6.76□□□□□ -1.33
GARNL3-213ENST00000464616 HIF1AQ16665 826 aa6.76□□□□□ -1.33
GARNL3-213ENST00000464616 SYT9Q86SS6 491 aa6.76□□□□□ -1.33
GARNL3-213ENST00000464616 ZNF295-AS1Q8N0V1 137 aa6.76□□□□□ -1.33
GARNL3-213ENST00000464616 PHACTR1Q9C0D0 580 aa6.76□□□□□ -1.33
GARNL3-213ENST00000464616 TFIP11Q9UBB9 837 aaKnown RBP6.76□□□□□ -1.33
GARNL3-213ENST00000464616 KIAA1024Q9UPX6 916 aa6.76□□□□□ -1.33
GARNL3-213ENST00000464616 M0R2N6 131 aa6.75□□□□□ -1.33
GARNL3-213ENST00000464616 EPHA4P54764 986 aa6.75□□□□□ -1.33
GARNL3-213ENST00000464616 SEC13P55735 322 aa6.75□□□□□ -1.33
GARNL3-213ENST00000464616 C1orf53Q5VUE5 145 aa6.75□□□□□ -1.33
GARNL3-213ENST00000464616 TSEN2Q8NCE0 465 aaKnown RBP6.75□□□□□ -1.33
GARNL3-213ENST00000464616 NGLY1Q96IV0 654 aa6.75□□□□□ -1.33
GARNL3-213ENST00000464616 UCN2Q96RP3 112 aa6.75□□□□□ -1.33
GARNL3-213ENST00000464616 SUV39H2Q9H5I1 410 aa6.75□□□□□ -1.33
GARNL3-213ENST00000464616 BRD7Q9NPI1 651 aa6.75□□□□□ -1.33
GARNL3-213ENST00000464616 ELOA3CA0A087WX78 387 aaPredicted RBP6.74□□□□□ -1.33
GARNL3-213ENST00000464616 KRBA1A5PL33 1030 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 ELOA3DA6NLF2 546 aaPredicted RBP6.74□□□□□ -1.33
GARNL3-213ENST00000464616 DGKGP49619 791 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 ELOA3BQ3SY89 546 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 SH3PXD2AQ5TCZ1 1133 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 LINC00114Q6XXX2 140 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 FCHSD1Q86WN1 690 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 SIX5Q8N196 739 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 ELOA3Q8NG57 546 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 STRN4Q9NRL3 753 aa6.74□□□□□ -1.33
GARNL3-213ENST00000464616 ATAD2Q6PL18 1390 aa6.73□□□□□ -1.33
GARNL3-213ENST00000464616 EFSO43281 561 aa6.73□□□□□ -1.33
GARNL3-213ENST00000464616 COL8A1P27658 744 aa6.73□□□□□ -1.33
GARNL3-213ENST00000464616 TBC1D8BQ0IIM8 1120 aa6.73□□□□□ -1.33
GARNL3-213ENST00000464616 SFSWAPQ12872 951 aaKnown RBP6.73□□□□□ -1.33
GARNL3-213ENST00000464616 PRRT3Q5FWE3 981 aa6.73□□□□□ -1.33
GARNL3-213ENST00000464616 GAS2L2Q8NHY3 880 aa6.73□□□□□ -1.33
GARNL3-213ENST00000464616 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
GARNL3-213ENST00000464616 VTI1AQ96AJ9 217 aa6.73□□□□□ -1.33
GARNL3-213ENST00000464616 KCNH4Q9UQ05 1017 aa6.73□□□□□ -1.33
GARNL3-213ENST00000464616 SIN3BO75182 1162 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 SPEM2Q0P670 501 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 ALDH16A1Q8IZ83 802 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 HSH2DQ96JZ2 352 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 PNMA5Q96PV4 448 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 PLVAPQ9BX97 442 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 IGFLR1Q9H665 355 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 VRTNQ9H8Y1 702 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 KLF15Q9UIH9 416 aa6.72□□□□□ -1.33
GARNL3-213ENST00000464616 MAFBQ9Y5Q3 323 aaPredicted RBP6.72□□□□□ -1.33
GARNL3-213ENST00000464616 LMOD1P29536 600 aaPredicted RBP6.71□□□□□ -1.34
GARNL3-213ENST00000464616 SUSD3Q96L08 255 aa6.71□□□□□ -1.34
GARNL3-213ENST00000464616 K7ELQ4 463 aaPredicted RBP6.7□□□□□ -1.34
GARNL3-213ENST00000464616 APBA3O96018 575 aa6.7□□□□□ -1.34
GARNL3-213ENST00000464616 BAG6P46379 1132 aa6.7□□□□□ -1.34
GARNL3-213ENST00000464616 HIRAP54198 1017 aaPredicted RBP6.7□□□□□ -1.34
GARNL3-213ENST00000464616 RAB44Q7Z6P3 723 aaPredicted RBP6.7□□□□□ -1.34
GARNL3-213ENST00000464616 BHMTQ93088 406 aa6.7□□□□□ -1.34
GARNL3-213ENST00000464616 PPP1R12CQ9BZL4 782 aa6.7□□□□□ -1.34
GARNL3-213ENST00000464616 C1QTNF9BB2RNN3 333 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 M0R082 166 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 ADAM23O75077 832 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 PROCP04070 461 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 SPATA31C1P0DKV0 1188 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 EPB42P16452 691 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 DPYDQ12882 1025 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 FNBP4Q8N3X1 1017 aaPredicted RBP6.69□□□□□ -1.34
GARNL3-213ENST00000464616 ZNF417Q8TAU3 575 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 ZNF587Q96SQ5 575 aaPredicted RBP6.69□□□□□ -1.34
GARNL3-213ENST00000464616 SLC30A3Q99726 388 aa6.69□□□□□ -1.34
GARNL3-213ENST00000464616 UBE2OQ9C0C9 1292 aaKnown RBP6.69□□□□□ -1.34
GARNL3-213ENST00000464616 A6NJR5 290 aa6.68□□□□□ -1.34
GARNL3-213ENST00000464616 FURINP09958 794 aa6.68□□□□□ -1.34
GARNL3-213ENST00000464616 HOXB4P17483 251 aaPredicted RBP6.68□□□□□ -1.34
GARNL3-213ENST00000464616 ADH7P40394 386 aa6.68□□□□□ -1.34
GARNL3-213ENST00000464616 TRIM28Q13263 835 aaKnown RBP6.68□□□□□ -1.34
GARNL3-213ENST00000464616 STAG2Q8N3U4 1231 aa6.68□□□□□ -1.34
GARNL3-213ENST00000464616 C2orf49Q9BVC5 232 aaPredicted RBP6.68□□□□□ -1.34
GARNL3-213ENST00000464616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.68□□□□□ -1.34
GARNL3-213ENST00000464616 HCN2Q9UL51 889 aa6.68□□□□□ -1.34
GARNL3-213ENST00000464616 ADARB2-AS1A8MUL3 147 aa6.67□□□□□ -1.34
GARNL3-213ENST00000464616 USP17L15C9J2P7 530 aa6.67□□□□□ -1.34
GARNL3-213ENST00000464616 USP17L10C9JJH3 530 aa6.67□□□□□ -1.34
GARNL3-213ENST00000464616 USP17L13C9JLJ4 530 aa6.67□□□□□ -1.34
GARNL3-213ENST00000464616 USP17L12C9JPN9 530 aa6.67□□□□□ -1.34
GARNL3-213ENST00000464616 USP17L11C9JVI0 530 aa6.67□□□□□ -1.34
GARNL3-213ENST00000464616 USP17L21D6R901 530 aa6.67□□□□□ -1.34
GARNL3-213ENST00000464616 USP17L18D6R9N7 530 aa6.67□□□□□ -1.34
GARNL3-213ENST00000464616 USP17L22D6RA61 530 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms