RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 POLRMTO00411 1230 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-205ENST00000464493 RGL2O15211 777 aa18.73■□□□□ 0.59
SQSTM1-205ENST00000464493 EXOSC9Q06265 439 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-205ENST00000464493 DDR1Q08345 913 aa18.73■□□□□ 0.59
SQSTM1-205ENST00000464493 CCDC30Q5VVM6 783 aa18.73■□□□□ 0.59
SQSTM1-205ENST00000464493 TBC1D9BQ66K14 1250 aa18.73■□□□□ 0.59
SQSTM1-205ENST00000464493 BICDL1Q6ZP65 573 aa18.73■□□□□ 0.59
SQSTM1-205ENST00000464493 MAP3K15Q6ZN16 1313 aa18.73■□□□□ 0.59
SQSTM1-205ENST00000464493 E9PSI1 815 aa18.72■□□□□ 0.59
SQSTM1-205ENST00000464493 COPS6Q7L5N1 327 aa18.72■□□□□ 0.59
SQSTM1-205ENST00000464493 SETDB2Q96T68 719 aa18.72■□□□□ 0.59
SQSTM1-205ENST00000464493 HYPKQ9NX55 129 aa18.72■□□□□ 0.59
SQSTM1-205ENST00000464493 CD2APQ9Y5K6 639 aa18.72■□□□□ 0.59
SQSTM1-205ENST00000464493 BCORQ6W2J9 1755 aa18.72■□□□□ 0.59
SQSTM1-205ENST00000464493 SLFN5Q08AF3 891 aa18.71■□□□□ 0.59
SQSTM1-205ENST00000464493 AIMP1Q12904 312 aaKnown RBP18.71■□□□□ 0.59
SQSTM1-205ENST00000464493 HLFQ16534 295 aa18.71■□□□□ 0.59
SQSTM1-205ENST00000464493 XAGE3Q8WTP9 111 aa18.71■□□□□ 0.59
SQSTM1-205ENST00000464493 ZBTB3Q9H5J0 574 aa18.7■□□□□ 0.58
SQSTM1-205ENST00000464493 VAMP4O75379 141 aa18.69■□□□□ 0.58
SQSTM1-205ENST00000464493 SERPINB2P05120 415 aa18.69■□□□□ 0.58
SQSTM1-205ENST00000464493 HNRNPUQ00839 825 aaKnown RBP eCLIP18.69■□□□□ 0.58
SQSTM1-205ENST00000464493 CDCA7LQ96GN5 454 aa18.69■□□□□ 0.58
SQSTM1-205ENST00000464493 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
SQSTM1-205ENST00000464493 NIP7Q9Y221 180 aaKnown RBP eCLIP18.68■□□□□ 0.58
SQSTM1-205ENST00000464493 CARMIL3Q8ND23 1372 aa18.68■□□□□ 0.58
SQSTM1-205ENST00000464493 NUP98P52948 1817 aa18.67■□□□□ 0.58
SQSTM1-205ENST00000464493 GIGYF2Q6Y7W6 1299 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-205ENST00000464493 NLGN2Q8NFZ4 835 aa18.67■□□□□ 0.58
SQSTM1-205ENST00000464493 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-205ENST00000464493 TCERG1O14776 1098 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-205ENST00000464493 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
SQSTM1-205ENST00000464493 TRMT2AQ8IZ69 625 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-205ENST00000464493 PHAXQ9H814 394 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-205ENST00000464493 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
SQSTM1-205ENST00000464493 PLBD2Q8NHP8 589 aa18.65■□□□□ 0.58
SQSTM1-205ENST00000464493 NRXN2Q9P2S2 1712 aa18.65■□□□□ 0.58
SQSTM1-205ENST00000464493 C10orf71Q711Q0 1435 aa18.65■□□□□ 0.58
SQSTM1-205ENST00000464493 TGFB2P61812 414 aa18.64■□□□□ 0.57
SQSTM1-205ENST00000464493 ZNF34Q8IZ26 560 aa18.64■□□□□ 0.57
SQSTM1-205ENST00000464493 KIF13BQ9NQT8 1826 aa18.64■□□□□ 0.57
SQSTM1-205ENST00000464493 ATP10DQ9P241 1426 aa18.64■□□□□ 0.57
SQSTM1-205ENST00000464493 NPHP1O15259 732 aa18.63■□□□□ 0.57
SQSTM1-205ENST00000464493 GPTP24298 496 aa18.63■□□□□ 0.57
SQSTM1-205ENST00000464493 HSP90AB3PQ58FF7 597 aa18.63■□□□□ 0.57
SQSTM1-205ENST00000464493 PRR5LQ6MZQ0 368 aa18.63■□□□□ 0.57
SQSTM1-205ENST00000464493 TPTE2Q6XPS3 522 aa18.63■□□□□ 0.57
SQSTM1-205ENST00000464493 NBPF5PQ86XG9 351 aaPredicted RBP18.63■□□□□ 0.57
SQSTM1-205ENST00000464493 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
SQSTM1-205ENST00000464493 TCIRG1Q13488 830 aa18.62■□□□□ 0.57
SQSTM1-205ENST00000464493 RIC3Q7Z5B4 369 aa18.62■□□□□ 0.57
SQSTM1-205ENST00000464493 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
SQSTM1-205ENST00000464493 CACNA1FO60840 1977 aa18.61■□□□□ 0.57
SQSTM1-205ENST00000464493 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
SQSTM1-205ENST00000464493 DDX58O95786 925 aaKnown RBP18.61■□□□□ 0.57
SQSTM1-205ENST00000464493 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
SQSTM1-205ENST00000464493 UBN2Q6ZU65 1347 aa18.6■□□□□ 0.57
SQSTM1-205ENST00000464493 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
SQSTM1-205ENST00000464493 ST5P78524 1137 aa18.6■□□□□ 0.57
SQSTM1-205ENST00000464493 G2E3Q7L622 706 aa18.6■□□□□ 0.57
SQSTM1-205ENST00000464493 CCDC24Q8N4L8 307 aa18.6■□□□□ 0.57
SQSTM1-205ENST00000464493 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
SQSTM1-205ENST00000464493 NYXQ9GZU5 481 aa18.6■□□□□ 0.57
SQSTM1-205ENST00000464493 DPEP1P16444 411 aa18.59■□□□□ 0.57
SQSTM1-205ENST00000464493 GTF2E1P29083 439 aaPredicted RBP18.59■□□□□ 0.57
SQSTM1-205ENST00000464493 PARP10Q53GL7 1025 aa18.59■□□□□ 0.57
SQSTM1-205ENST00000464493 SUSD4Q5VX71 490 aa18.59■□□□□ 0.57
SQSTM1-205ENST00000464493 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
SQSTM1-205ENST00000464493 PXDNLA1KZ92 1463 aa18.58■□□□□ 0.57
SQSTM1-205ENST00000464493 N4BP2Q86UW6 1770 aaPredicted RBP18.58■□□□□ 0.57
SQSTM1-205ENST00000464493 ZBED9Q6R2W3 1325 aa18.58■□□□□ 0.57
SQSTM1-205ENST00000464493 PDE6BP35913 854 aa18.58■□□□□ 0.56
SQSTM1-205ENST00000464493 KSR2Q6VAB6 950 aa18.58■□□□□ 0.56
SQSTM1-205ENST00000464493 UTRNP46939 3433 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 PI4KAP2A4QPH2 592 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 CHRNA5P30532 468 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 FLIIQ13045 1269 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 GPR162Q16538 588 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 NLRP10Q86W26 655 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 PI4KAP1Q8N8J0 262 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 ZNF428Q96B54 188 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 ISCA1Q9BUE6 129 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 ANKRD36CQ5JPF3 1778 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 KIAA1551Q9HCM1 1747 aa18.57■□□□□ 0.56
SQSTM1-205ENST00000464493 ARFGEF2Q9Y6D5 1785 aa18.56■□□□□ 0.56
SQSTM1-205ENST00000464493 ATP5J2-PTCD1G3V325 749 aa18.56■□□□□ 0.56
SQSTM1-205ENST00000464493 H0YIN7 160 aa18.56■□□□□ 0.56
SQSTM1-205ENST00000464493 CT47B1P0C2W7 299 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-205ENST00000464493 KCNA3P22001 575 aa18.56■□□□□ 0.56
SQSTM1-205ENST00000464493 NUTM1Q86Y26 1132 aa18.56■□□□□ 0.56
SQSTM1-205ENST00000464493 PDZRN3Q9UPQ7 1066 aa18.56■□□□□ 0.56
SQSTM1-205ENST00000464493 MAP3K2Q9Y2U5 619 aa18.56■□□□□ 0.56
SQSTM1-205ENST00000464493 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-205ENST00000464493 NTSR2O95665 410 aa18.55■□□□□ 0.56
SQSTM1-205ENST00000464493 TRIM28Q13263 835 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-205ENST00000464493 FKBP5Q13451 457 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-205ENST00000464493 ERFEQ4G0M1 354 aa18.55■□□□□ 0.56
SQSTM1-205ENST00000464493 C2CD5Q86YS7 1000 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms