RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 SLX4Q8IY92 1834 aa17.93■□□□□ 0.46
MRPL55-224ENST00000464148 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
MRPL55-224ENST00000464148 GAS2L2Q8NHY3 880 aa17.92■□□□□ 0.46
MRPL55-224ENST00000464148 CAMTA2O94983 1202 aa17.91■□□□□ 0.46
MRPL55-224ENST00000464148 LDHDQ86WU2 507 aa17.91■□□□□ 0.46
MRPL55-224ENST00000464148 DZIP3Q86Y13 1208 aaKnown RBP17.91■□□□□ 0.46
MRPL55-224ENST00000464148 CNTNAP1P78357 1384 aa17.91■□□□□ 0.46
MRPL55-224ENST00000464148 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
MRPL55-224ENST00000464148 ARFGEF2Q9Y6D5 1785 aa17.9■□□□□ 0.46
MRPL55-224ENST00000464148 FOXN1O15353 648 aa17.9■□□□□ 0.46
MRPL55-224ENST00000464148 AIDAQ96BJ3 306 aa17.9■□□□□ 0.46
MRPL55-224ENST00000464148 CCDC93Q567U6 631 aa17.89■□□□□ 0.45
MRPL55-224ENST00000464148 EAPPQ56P03 285 aaPredicted RBP17.89■□□□□ 0.45
MRPL55-224ENST00000464148 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
MRPL55-224ENST00000464148 TAF1DQ9H5J8 278 aaPredicted RBP17.89■□□□□ 0.45
MRPL55-224ENST00000464148 SCN4AP35499 1836 aa17.88■□□□□ 0.45
MRPL55-224ENST00000464148 BTBD11A6QL63 1104 aa17.88■□□□□ 0.45
MRPL55-224ENST00000464148 CNGB1Q14028 1251 aaPredicted RBP17.88■□□□□ 0.45
MRPL55-224ENST00000464148 L3MBTL3Q96JM7 780 aaPredicted RBP17.88■□□□□ 0.45
MRPL55-224ENST00000464148 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
MRPL55-224ENST00000464148 KIF7Q2M1P5 1343 aa17.88■□□□□ 0.45
MRPL55-224ENST00000464148 PASKQ96RG2 1323 aa17.88■□□□□ 0.45
MRPL55-224ENST00000464148 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
MRPL55-224ENST00000464148 TMEM88BA6NKF7 163 aa17.87■□□□□ 0.45
MRPL55-224ENST00000464148 NPR1P16066 1061 aa17.87■□□□□ 0.45
MRPL55-224ENST00000464148 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
MRPL55-224ENST00000464148 ZNF652Q9Y2D9 606 aa17.87■□□□□ 0.45
MRPL55-224ENST00000464148 KCNQ3O43525 872 aa17.86■□□□□ 0.45
MRPL55-224ENST00000464148 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-224ENST00000464148 CTCFP49711 727 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-224ENST00000464148 VEGFBP49765 207 aa17.86■□□□□ 0.45
MRPL55-224ENST00000464148 PER1O15534 1290 aaPredicted RBP17.85■□□□□ 0.45
MRPL55-224ENST00000464148 FKBP4Q02790 459 aaKnown RBP eCLIP17.85■□□□□ 0.45
MRPL55-224ENST00000464148 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
MRPL55-224ENST00000464148 C7orf43Q8WVR3 580 aa17.85■□□□□ 0.45
MRPL55-224ENST00000464148 ZNF277Q9NRM2 450 aaPredicted RBP17.85■□□□□ 0.45
MRPL55-224ENST00000464148 HACL1Q9UJ83 578 aa17.85■□□□□ 0.45
MRPL55-224ENST00000464148 USP16Q9Y5T5 823 aa17.85■□□□□ 0.45
MRPL55-224ENST00000464148 COL3A1P02461 1466 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-224ENST00000464148 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
MRPL55-224ENST00000464148 ZNF541Q9H0D2 1346 aa17.84■□□□□ 0.45
MRPL55-224ENST00000464148 ITGBL1O95965 494 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-224ENST00000464148 TPTE2Q6XPS3 522 aa17.84■□□□□ 0.45
MRPL55-224ENST00000464148 EPHX2P34913 555 aa17.83■□□□□ 0.44
MRPL55-224ENST00000464148 RTKN2Q8IZC4 609 aa17.83■□□□□ 0.44
MRPL55-224ENST00000464148 NIP7Q9Y221 180 aaKnown RBP eCLIP17.83■□□□□ 0.44
MRPL55-224ENST00000464148 PRAMEF22A3QJZ6 481 aa17.82■□□□□ 0.44
MRPL55-224ENST00000464148 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
MRPL55-224ENST00000464148 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
MRPL55-224ENST00000464148 PNMA8AQ86V59 439 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-224ENST00000464148 PHACTR3Q96KR7 559 aa17.82■□□□□ 0.44
MRPL55-224ENST00000464148 SNRPA1P09661 255 aaKnown RBP17.81■□□□□ 0.44
MRPL55-224ENST00000464148 GTF2E1P29083 439 aaPredicted RBP17.81■□□□□ 0.44
MRPL55-224ENST00000464148 PRKAR2BP31323 418 aa17.81■□□□□ 0.44
MRPL55-224ENST00000464148 LBX1P52954 281 aa17.81■□□□□ 0.44
MRPL55-224ENST00000464148 CCER1Q8TC90 406 aaPredicted RBP17.81■□□□□ 0.44
MRPL55-224ENST00000464148 RNF123Q5XPI4 1314 aa17.8■□□□□ 0.44
MRPL55-224ENST00000464148 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
MRPL55-224ENST00000464148 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
MRPL55-224ENST00000464148 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
MRPL55-224ENST00000464148 DEFB115Q30KQ5 88 aa17.8■□□□□ 0.44
MRPL55-224ENST00000464148 MAP1SQ66K74 1059 aaPredicted RBP17.8■□□□□ 0.44
MRPL55-224ENST00000464148 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
MRPL55-224ENST00000464148 RTF1Q92541 710 aaKnown RBP17.8■□□□□ 0.44
MRPL55-224ENST00000464148 WBP1LQ9NX94 342 aa17.8■□□□□ 0.44
MRPL55-224ENST00000464148 SYNE4Q8N205 404 aa17.79■□□□□ 0.44
MRPL55-224ENST00000464148 FZD9O00144 591 aa17.78■□□□□ 0.44
MRPL55-224ENST00000464148 GPC2Q8N158 579 aa17.78■□□□□ 0.44
MRPL55-224ENST00000464148 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
MRPL55-224ENST00000464148 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
MRPL55-224ENST00000464148 ABT1Q9ULW3 272 aaKnown RBP17.78■□□□□ 0.44
MRPL55-224ENST00000464148 ADAMTSL1Q8N6G6 1762 aa17.78■□□□□ 0.44
MRPL55-224ENST00000464148 RASSF10A6NK89 507 aa17.77■□□□□ 0.44
MRPL55-224ENST00000464148 MCM10Q7L590 875 aa17.77■□□□□ 0.44
MRPL55-224ENST00000464148 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.44
MRPL55-224ENST00000464148 NPC1L1Q9UHC9 1359 aa17.77■□□□□ 0.43
MRPL55-224ENST00000464148 WDR33Q9C0J8 1336 aaKnown RBP17.76■□□□□ 0.43
MRPL55-224ENST00000464148 NBPF26B4DH59 902 aa17.76■□□□□ 0.43
MRPL55-224ENST00000464148 RGL2O15211 777 aa17.76■□□□□ 0.43
MRPL55-224ENST00000464148 MAP2K1Q02750 393 aaPredicted RBP17.76■□□□□ 0.43
MRPL55-224ENST00000464148 NBPF10Q6P3W6 841 aaKnown RBP17.76■□□□□ 0.43
MRPL55-224ENST00000464148 NBPF15Q8N660 670 aa17.76■□□□□ 0.43
MRPL55-224ENST00000464148 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
MRPL55-224ENST00000464148 LMOD1P29536 600 aaPredicted RBP17.75■□□□□ 0.43
MRPL55-224ENST00000464148 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
MRPL55-224ENST00000464148 HLFQ16534 295 aa17.75■□□□□ 0.43
MRPL55-224ENST00000464148 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
MRPL55-224ENST00000464148 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
MRPL55-224ENST00000464148 PSMD1Q99460 953 aa17.74■□□□□ 0.43
MRPL55-224ENST00000464148 U2AF1L5P0DN76 240 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-224ENST00000464148 U2AF1Q01081 240 aaKnown RBP eCLIP17.73■□□□□ 0.43
MRPL55-224ENST00000464148 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
MRPL55-224ENST00000464148 PAXIP1Q6ZW49 1069 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-224ENST00000464148 ABHD8Q96I13 439 aa17.73■□□□□ 0.43
MRPL55-224ENST00000464148 NYXQ9GZU5 481 aa17.73■□□□□ 0.43
MRPL55-224ENST00000464148 DDX21Q9NR30 783 aaKnown RBP eCLIP17.73■□□□□ 0.43
MRPL55-224ENST00000464148 CC2D2BQ6DHV5 1058 aa17.72■□□□□ 0.43
MRPL55-224ENST00000464148 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
MRPL55-224ENST00000464148 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
MRPL55-224ENST00000464148 RPGRQ92834 1020 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms