RNA–Protein interactions for RNA: ENST00000463852.1

HUWE1-206, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-206ENST00000463852 RFC4P35249 363 aa12.84□□□□□ -0.35
HUWE1-206ENST00000463852 CRKLP46109 303 aaKnown RBP12.84□□□□□ -0.35
HUWE1-206ENST00000463852 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
HUWE1-206ENST00000463852 RC3H1Q5TC82 1133 aaKnown RBP12.84□□□□□ -0.35
HUWE1-206ENST00000463852 WDR63Q8IWG1 891 aa12.84□□□□□ -0.35
HUWE1-206ENST00000463852 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
HUWE1-206ENST00000463852 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
HUWE1-206ENST00000463852 ZNF521Q96K83 1311 aa12.84□□□□□ -0.35
HUWE1-206ENST00000463852 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
HUWE1-206ENST00000463852 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
HUWE1-206ENST00000463852 POLRMTO00411 1230 aaKnown RBP12.83□□□□□ -0.36
HUWE1-206ENST00000463852 STARD3NLO95772 234 aa12.83□□□□□ -0.36
HUWE1-206ENST00000463852 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
HUWE1-206ENST00000463852 EIF4A1P60842 406 aaKnown RBP12.83□□□□□ -0.36
HUWE1-206ENST00000463852 TEX13AQ9BXU3 409 aaPredicted RBP12.83□□□□□ -0.36
HUWE1-206ENST00000463852 MBIPQ9NS73 344 aa12.83□□□□□ -0.36
HUWE1-206ENST00000463852 KDM2BQ8NHM5 1336 aa12.83□□□□□ -0.36
HUWE1-206ENST00000463852 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
HUWE1-206ENST00000463852 ZNF853P0CG23 659 aa12.82□□□□□ -0.36
HUWE1-206ENST00000463852 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
HUWE1-206ENST00000463852 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
HUWE1-206ENST00000463852 FANCIQ9NVI1 1328 aa12.82□□□□□ -0.36
HUWE1-206ENST00000463852 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
HUWE1-206ENST00000463852 CYP19A1P11511 503 aaPredicted RBP12.81□□□□□ -0.36
HUWE1-206ENST00000463852 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
HUWE1-206ENST00000463852 COL11A2P13942 1736 aaPredicted RBP12.8□□□□□ -0.36
HUWE1-206ENST00000463852 POTECB2RU33 542 aa12.8□□□□□ -0.36
HUWE1-206ENST00000463852 HOXB7P09629 217 aa12.8□□□□□ -0.36
HUWE1-206ENST00000463852 GOLGA2Q08379 1002 aa12.8□□□□□ -0.36
HUWE1-206ENST00000463852 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
HUWE1-206ENST00000463852 COL15A1P39059 1388 aa12.8□□□□□ -0.36
HUWE1-206ENST00000463852 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
HUWE1-206ENST00000463852 ANKRD31Q8N7Z5 1873 aa12.79□□□□□ -0.36
HUWE1-206ENST00000463852 E9PSI1 815 aa12.79□□□□□ -0.36
HUWE1-206ENST00000463852 NFKBIEO00221 500 aa12.79□□□□□ -0.36
HUWE1-206ENST00000463852 TM4SF1P30408 202 aa12.79□□□□□ -0.36
HUWE1-206ENST00000463852 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
HUWE1-206ENST00000463852 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
HUWE1-206ENST00000463852 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
HUWE1-206ENST00000463852 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
HUWE1-206ENST00000463852 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
HUWE1-206ENST00000463852 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
HUWE1-206ENST00000463852 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
HUWE1-206ENST00000463852 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
HUWE1-206ENST00000463852 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.37
HUWE1-206ENST00000463852 NFIXQ14938 502 aa12.77□□□□□ -0.37
HUWE1-206ENST00000463852 KRT24Q2M2I5 525 aa12.77□□□□□ -0.37
HUWE1-206ENST00000463852 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.37
HUWE1-206ENST00000463852 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
HUWE1-206ENST00000463852 GLTPD2A6NH11 291 aa12.76□□□□□ -0.37
HUWE1-206ENST00000463852 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
HUWE1-206ENST00000463852 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
HUWE1-206ENST00000463852 ZNF330Q9Y3S2 320 aaPredicted RBP12.76□□□□□ -0.37
HUWE1-206ENST00000463852 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
HUWE1-206ENST00000463852 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
HUWE1-206ENST00000463852 LMNB1P20700 586 aa12.75□□□□□ -0.37
HUWE1-206ENST00000463852 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
HUWE1-206ENST00000463852 IL6STP40189 918 aaPredicted RBP12.75□□□□□ -0.37
HUWE1-206ENST00000463852 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
HUWE1-206ENST00000463852 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
HUWE1-206ENST00000463852 A0A087WZG4 1122 aa12.74□□□□□ -0.37
HUWE1-206ENST00000463852 A1BGP04217 495 aa12.74□□□□□ -0.37
HUWE1-206ENST00000463852 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
HUWE1-206ENST00000463852 EIF2S2P20042 333 aaKnown RBP12.74□□□□□ -0.37
HUWE1-206ENST00000463852 TWISTNBQ3B726 338 aaPredicted RBP12.74□□□□□ -0.37
HUWE1-206ENST00000463852 CCDC24Q8N4L8 307 aa12.74□□□□□ -0.37
HUWE1-206ENST00000463852 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
HUWE1-206ENST00000463852 FOXN1O15353 648 aa12.73□□□□□ -0.37
HUWE1-206ENST00000463852 SLFN5Q08AF3 891 aa12.73□□□□□ -0.37
HUWE1-206ENST00000463852 C8orf58Q8NAV2 365 aa12.73□□□□□ -0.37
HUWE1-206ENST00000463852 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
HUWE1-206ENST00000463852 FER1L6Q2WGJ9 1857 aa12.73□□□□□ -0.37
HUWE1-206ENST00000463852 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
HUWE1-206ENST00000463852 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
HUWE1-206ENST00000463852 ELL2O00472 640 aaPredicted RBP12.72□□□□□ -0.37
HUWE1-206ENST00000463852 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
HUWE1-206ENST00000463852 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
HUWE1-206ENST00000463852 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
HUWE1-206ENST00000463852 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
HUWE1-206ENST00000463852 C2CD5Q86YS7 1000 aa12.72□□□□□ -0.37
HUWE1-206ENST00000463852 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
HUWE1-206ENST00000463852 STK31Q9BXU1 1019 aa12.72□□□□□ -0.37
HUWE1-206ENST00000463852 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
HUWE1-206ENST00000463852 NBPF26B4DH59 902 aa12.71□□□□□ -0.37
HUWE1-206ENST00000463852 ZPR1O75312 459 aa12.71□□□□□ -0.37
HUWE1-206ENST00000463852 SERPINB2P05120 415 aa12.71□□□□□ -0.37
HUWE1-206ENST00000463852 MYL6BP14649 208 aa12.71□□□□□ -0.37
HUWE1-206ENST00000463852 NBPF10Q6P3W6 841 aaKnown RBP12.71□□□□□ -0.37
HUWE1-206ENST00000463852 KIF6Q6ZMV9 814 aa12.71□□□□□ -0.37
HUWE1-206ENST00000463852 NBPF15Q8N660 670 aa12.71□□□□□ -0.37
HUWE1-206ENST00000463852 TSPYL6Q8N831 410 aa12.71□□□□□ -0.37
HUWE1-206ENST00000463852 CDCA7LQ96GN5 454 aa12.71□□□□□ -0.37
HUWE1-206ENST00000463852 DDX21Q9NR30 783 aaKnown RBP eCLIP12.71□□□□□ -0.37
HUWE1-206ENST00000463852 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.37
HUWE1-206ENST00000463852 SLX4Q8IY92 1834 aa12.7□□□□□ -0.38
HUWE1-206ENST00000463852 BICDL1Q6ZP65 573 aa12.7□□□□□ -0.38
HUWE1-206ENST00000463852 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
HUWE1-206ENST00000463852 TTLL6Q8N841 843 aa12.7□□□□□ -0.38
HUWE1-206ENST00000463852 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
HUWE1-206ENST00000463852 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms