RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ADGRF5Q8IZF2 1346 aa18.29■□□□□ 0.52
SMC4-204ENST00000462787 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
SMC4-204ENST00000462787 TSHZ3Q63HK5 1081 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 BCL2L12Q9HB09 334 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 TUBBP07437 444 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 NPC1L1Q9UHC9 1359 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 PEG3Q9GZU2 1588 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 COL17A1Q9UMD9 1497 aaPredicted RBP18.28■□□□□ 0.52
SMC4-204ENST00000462787 CTAGE15A4D2H0 777 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 CTAGE8P0CG41 777 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 MCM6Q14566 821 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 CTAGE6Q86UF2 777 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 CTAGE4Q8IX94 777 aa18.28■□□□□ 0.52
SMC4-204ENST00000462787 USO1O60763 962 aaKnown RBP18.27■□□□□ 0.52
SMC4-204ENST00000462787 DMTNQ08495 405 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
SMC4-204ENST00000462787 AOPEPQ8N6M6 819 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 KIF14Q15058 1648 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 SYT1P21579 422 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 CCDC57Q2TAC2 916 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 NECAB1Q8N987 351 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
SMC4-204ENST00000462787 TMX4Q9H1E5 349 aaPredicted RBP18.27■□□□□ 0.52
SMC4-204ENST00000462787 KLHL10Q6JEL2 608 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 ZSWIM4Q9H7M6 989 aa18.27■□□□□ 0.52
SMC4-204ENST00000462787 MRPS27Q92552 414 aaKnown RBP18.27■□□□□ 0.51
SMC4-204ENST00000462787 MEIS3Q99687 375 aa18.27■□□□□ 0.51
SMC4-204ENST00000462787 TANGO6Q9C0B7 1094 aa18.27■□□□□ 0.51
SMC4-204ENST00000462787 STK11IPQ8N1F8 1099 aa18.26■□□□□ 0.51
SMC4-204ENST00000462787 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
SMC4-204ENST00000462787 LUZP1Q86V48 1076 aa18.26■□□□□ 0.51
SMC4-204ENST00000462787 GAS2L3Q86XJ1 694 aa18.26■□□□□ 0.51
SMC4-204ENST00000462787 EHBP1Q8NDI1 1231 aa18.26■□□□□ 0.51
SMC4-204ENST00000462787 CPLX3Q8WVH0 158 aa18.26■□□□□ 0.51
SMC4-204ENST00000462787 FKBP4Q02790 459 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMC4-204ENST00000462787 CCDC102BQ68D86 513 aa18.26■□□□□ 0.51
SMC4-204ENST00000462787 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
SMC4-204ENST00000462787 SYT10Q6XYQ8 523 aa18.26■□□□□ 0.51
SMC4-204ENST00000462787 KCNG4Q8TDN1 519 aa18.26■□□□□ 0.51
SMC4-204ENST00000462787 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
SMC4-204ENST00000462787 CKAP4Q07065 602 aaKnown RBP18.25■□□□□ 0.51
SMC4-204ENST00000462787 TAX1BP1Q86VP1 789 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 C10orf67Q8IYJ2 551 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 TEX14Q8IWB6 1497 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 IFT140Q96RY7 1462 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 NUTM2GQ5VZR2 741 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 CEP126Q9P2H0 1117 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 A0A1B0GUL7 405 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 KANK3Q6NY19 840 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 ABTB2Q8N961 1025 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 NBPF11Q86T75 865 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 CCDC61Q9Y6R9 512 aa18.25■□□□□ 0.51
SMC4-204ENST00000462787 TAF7Q15545 349 aaPredicted RBP18.24■□□□□ 0.51
SMC4-204ENST00000462787 TXNDC2Q86VQ3 553 aa18.24■□□□□ 0.51
SMC4-204ENST00000462787 GTF3C6Q969F1 213 aa18.24■□□□□ 0.51
SMC4-204ENST00000462787 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
SMC4-204ENST00000462787 TMEM63CQ9P1W3 806 aa18.24■□□□□ 0.51
SMC4-204ENST00000462787 AK2P54819 239 aa18.24■□□□□ 0.51
SMC4-204ENST00000462787 ZFP91Q96JP5 570 aaPredicted RBP18.24■□□□□ 0.51
SMC4-204ENST00000462787 NAA15Q9BXJ9 866 aaKnown RBP18.24■□□□□ 0.51
SMC4-204ENST00000462787 FKBP15Q5T1M5 1219 aa18.24■□□□□ 0.51
SMC4-204ENST00000462787 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
SMC4-204ENST00000462787 FYB1O15117 783 aa18.23■□□□□ 0.51
SMC4-204ENST00000462787 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
SMC4-204ENST00000462787 EMILIN1Q9Y6C2 1016 aa18.23■□□□□ 0.51
SMC4-204ENST00000462787 CCT2P78371 535 aaKnown RBP18.23■□□□□ 0.51
SMC4-204ENST00000462787 CEP85Q6P2H3 762 aa18.23■□□□□ 0.51
SMC4-204ENST00000462787 IBTKQ9P2D0 1353 aaPredicted RBP18.23■□□□□ 0.51
SMC4-204ENST00000462787 ZBTB7BO15156 539 aaPredicted RBP18.23■□□□□ 0.51
SMC4-204ENST00000462787 NF2P35240 595 aa18.23■□□□□ 0.51
SMC4-204ENST00000462787 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
SMC4-204ENST00000462787 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
SMC4-204ENST00000462787 KRBA2Q6ZNG9 492 aa18.23■□□□□ 0.51
SMC4-204ENST00000462787 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 C17orf53Q8N3J3 647 aaPredicted RBP18.22■□□□□ 0.51
SMC4-204ENST00000462787 VPS18Q9P253 973 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 VAMP4O75379 141 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 MICALL1Q8N3F8 863 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 ENOX2Q16206 610 aaKnown RBP18.22■□□□□ 0.51
SMC4-204ENST00000462787 GPATCH8Q9UKJ3 1502 aaKnown RBP18.22■□□□□ 0.51
SMC4-204ENST00000462787 CCDC196A0A1B0GTZ2 297 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 EBAG9O00559 213 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 CCDC175P0C221 793 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 SYKP43405 635 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
SMC4-204ENST00000462787 C14orf93Q9H972 538 aaKnown RBP18.22■□□□□ 0.51
SMC4-204ENST00000462787 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
SMC4-204ENST00000462787 CHMLP26374 656 aa18.21■□□□□ 0.51
SMC4-204ENST00000462787 GOLGA8BA8MQT2 603 aa18.21■□□□□ 0.51
SMC4-204ENST00000462787 SLC26A8Q96RN1 970 aa18.21■□□□□ 0.51
SMC4-204ENST00000462787 RBM8AQ9Y5S9 174 aaKnown RBP18.21■□□□□ 0.51
SMC4-204ENST00000462787 ZNF75DP51815 510 aa18.21■□□□□ 0.51
SMC4-204ENST00000462787 ALS2CR12Q96Q35 445 aa18.21■□□□□ 0.51
SMC4-204ENST00000462787 SYCP1Q15431 976 aa18.21■□□□□ 0.5
SMC4-204ENST00000462787 HDXQ7Z353 690 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms