RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 PRIMPOLQ96LW4 560 aa14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 CAMKK2Q96RR4 588 aa14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 C22orf23Q9BZE7 217 aa14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 GTF2F1P35269 517 aaKnown RBP eCLIP14.06□□□□□ -0.163e-41■■■■■ 39
TRAPPC3-205ENST00000462715 SLC27A3Q5K4L6 730 aa14.06□□□□□ -0.16
TRAPPC3-205ENST00000462715 PAPPAQ13219 1627 aa14.06□□□□□ -0.16
TRAPPC3-205ENST00000462715 HMGN5P82970 282 aaKnown RBP14.06□□□□□ -0.16
TRAPPC3-205ENST00000462715 EZH2Q15910 746 aaKnown RBP14.06□□□□□ -0.16
TRAPPC3-205ENST00000462715 LY75O60449 1722 aa14.06□□□□□ -0.16
TRAPPC3-205ENST00000462715 TXNRD1Q16881 649 aa14.05□□□□□ -0.16
TRAPPC3-205ENST00000462715 BABAM1Q9NWV8 329 aa14.05□□□□□ -0.16
TRAPPC3-205ENST00000462715 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
TRAPPC3-205ENST00000462715 MYRIPQ8NFW9 859 aa14.05□□□□□ -0.16
TRAPPC3-205ENST00000462715 TNPO1Q92973 898 aaKnown RBP14.05□□□□□ -0.16
TRAPPC3-205ENST00000462715 TMEM51Q9NW97 253 aa14.05□□□□□ -0.16
TRAPPC3-205ENST00000462715 CCDC39Q9UFE4 941 aa14.05□□□□□ -0.16
TRAPPC3-205ENST00000462715 SLC39A6Q13433 755 aa14.04□□□□□ -0.16
TRAPPC3-205ENST00000462715 WWC1Q8IX03 1113 aa14.04□□□□□ -0.16
TRAPPC3-205ENST00000462715 CCNL1Q9UK58 526 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC3-205ENST00000462715 RREB1Q92766 1687 aa14.04□□□□□ -0.16
TRAPPC3-205ENST00000462715 LOC102724428A0A0B4J2F2 783 aa14.04□□□□□ -0.16
TRAPPC3-205ENST00000462715 E9PSI1 815 aa14.04□□□□□ -0.16
TRAPPC3-205ENST00000462715 SIK1P57059 783 aa14.04□□□□□ -0.16
TRAPPC3-205ENST00000462715 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
TRAPPC3-205ENST00000462715 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
TRAPPC3-205ENST00000462715 SLC20A2Q08357 652 aa14.03□□□□□ -0.16
TRAPPC3-205ENST00000462715 TSPYL4Q9UJ04 414 aa14.03□□□□□ -0.16
TRAPPC3-205ENST00000462715 UBR2Q8IWV8 1755 aa14.02□□□□□ -0.16
TRAPPC3-205ENST00000462715 PROM2Q8N271 834 aa14.02□□□□□ -0.16
TRAPPC3-205ENST00000462715 FMNL2Q96PY5 1086 aa14.02□□□□□ -0.16
TRAPPC3-205ENST00000462715 IFT57Q9NWB7 429 aa14.02□□□□□ -0.16
TRAPPC3-205ENST00000462715 ZNF831Q5JPB2 1677 aa14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 IL16Q14005 1332 aa14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 KCPQ6ZWJ8 1503 aa14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 ATP6V1AP38606 617 aa14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 GNAI1P63096 354 aa14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 WDR63Q8IWG1 891 aa14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 CFAP44Q96MT7 982 aa14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 KDM3BQ7LBC6 1761 aa14.02□□□□□ -0.17
TRAPPC3-205ENST00000462715 RWDD1Q9H446 243 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC3-205ENST00000462715 MIS18AQ9NYP9 233 aa14.01□□□□□ -0.17
TRAPPC3-205ENST00000462715 CHL1O00533 1208 aa14.01□□□□□ -0.17
TRAPPC3-205ENST00000462715 NUP188Q5SRE5 1749 aa14.01□□□□□ -0.17
TRAPPC3-205ENST00000462715 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
TRAPPC3-205ENST00000462715 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
TRAPPC3-205ENST00000462715 NBPF14Q5TI25 921 aa14□□□□□ -0.17
TRAPPC3-205ENST00000462715 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC3-205ENST00000462715 HEG1Q9ULI3 1381 aa13.99□□□□□ -0.17
TRAPPC3-205ENST00000462715 C5P01031 1676 aa13.99□□□□□ -0.17
TRAPPC3-205ENST00000462715 KCNQ3O43525 872 aa13.99□□□□□ -0.17
TRAPPC3-205ENST00000462715 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC3-205ENST00000462715 ZNF853P0CG23 659 aa13.99□□□□□ -0.17
TRAPPC3-205ENST00000462715 KCNQ4P56696 695 aa13.98□□□□□ -0.17
TRAPPC3-205ENST00000462715 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
TRAPPC3-205ENST00000462715 SNRPA1P09661 255 aaKnown RBP13.98□□□□□ -0.17
TRAPPC3-205ENST00000462715 EIF4A1P60842 406 aaKnown RBP13.98□□□□□ -0.17
TRAPPC3-205ENST00000462715 ITPK1Q13572 414 aa13.98□□□□□ -0.17
TRAPPC3-205ENST00000462715 PRDM10Q9NQV6 1147 aa13.98□□□□□ -0.17
TRAPPC3-205ENST00000462715 PDZRN3Q9UPQ7 1066 aa13.98□□□□□ -0.17
TRAPPC3-205ENST00000462715 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
TRAPPC3-205ENST00000462715 STK32BQ9NY57 414 aa13.97□□□□□ -0.17
TRAPPC3-205ENST00000462715 TAF1LQ8IZX4 1826 aa13.97□□□□□ -0.17
TRAPPC3-205ENST00000462715 TJP1Q07157 1748 aa13.97□□□□□ -0.17
TRAPPC3-205ENST00000462715 STARD3NLO95772 234 aa13.96□□□□□ -0.17
TRAPPC3-205ENST00000462715 DNAJC10Q8IXB1 793 aa13.96□□□□□ -0.17
TRAPPC3-205ENST00000462715 LINC00116Q8NCU8 138 aa13.96□□□□□ -0.17
TRAPPC3-205ENST00000462715 FEZ1Q99689 392 aa13.96□□□□□ -0.17
TRAPPC3-205ENST00000462715 C4BP0C0L5 1744 aa13.96□□□□□ -0.18
TRAPPC3-205ENST00000462715 COL5A3P25940 1745 aaPredicted RBP13.96□□□□□ -0.18
TRAPPC3-205ENST00000462715 AK7Q96M32 723 aa13.95□□□□□ -0.18
TRAPPC3-205ENST00000462715 FAM193AP78312 1265 aa13.95□□□□□ -0.18
TRAPPC3-205ENST00000462715 CNTNAP4Q9C0A0 1308 aa13.95□□□□□ -0.18
TRAPPC3-205ENST00000462715 KIAA2012Q0VF49 1180 aa13.94□□□□□ -0.18
TRAPPC3-205ENST00000462715 RC3H1Q5TC82 1133 aaKnown RBP13.94□□□□□ -0.18
TRAPPC3-205ENST00000462715 GIGYF1O75420 1035 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC3-205ENST00000462715 GABPB1Q06547 395 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC3-205ENST00000462715 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
TRAPPC3-205ENST00000462715 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
TRAPPC3-205ENST00000462715 DDX49Q9Y6V7 483 aaKnown RBP13.94□□□□□ -0.18
TRAPPC3-205ENST00000462715 CYP19A1P11511 503 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 FTSJ3Q8IY81 847 aaKnown RBP13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 SPRYD3Q8NCJ5 442 aa13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 TSR2Q969E8 191 aaKnown RBP13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 CHMP4BQ9H444 224 aaKnown RBP13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 LAMB4A4D0S4 1761 aa13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 HOXB7P09629 217 aa13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 CRKLP46109 303 aaKnown RBP13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 CCDC87Q9NVE4 849 aa13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
TRAPPC3-205ENST00000462715 ZNF827Q17R98 1081 aa13.92□□□□□ -0.18
TRAPPC3-205ENST00000462715 SOS1Q07889 1333 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC3-205ENST00000462715 GNPATO15228 680 aa13.92□□□□□ -0.18
TRAPPC3-205ENST00000462715 BCAR3O75815 825 aa13.92□□□□□ -0.18
TRAPPC3-205ENST00000462715 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
TRAPPC3-205ENST00000462715 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 FLAD1Q8NFF5 587 aa13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 RTCBQ9Y3I0 505 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 USP16Q9Y5T5 823 aa13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 PRAMEF22A3QJZ6 481 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms