RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 TPTE2Q6XPS3 522 aa12.3□□□□□ -0.44
PKP4-208ENST00000462335 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
PKP4-208ENST00000462335 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
PKP4-208ENST00000462335 E9PSI1 815 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 ANXA1P04083 346 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 TM4SF1P30408 202 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 HNRNPUQ00839 825 aaKnown RBP eCLIP12.29□□□□□ -0.44
PKP4-208ENST00000462335 HSP90AB3PQ58FF7 597 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 TBC1D9BQ66K14 1250 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 C8orf58Q8NAV2 365 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 XAGE3Q8WTP9 111 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
PKP4-208ENST00000462335 TGFB2P61812 414 aa12.28□□□□□ -0.44
PKP4-208ENST00000462335 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
PKP4-208ENST00000462335 CNBD1Q8NA66 436 aa12.28□□□□□ -0.44
PKP4-208ENST00000462335 NYXQ9GZU5 481 aa12.28□□□□□ -0.44
PKP4-208ENST00000462335 CARMIL3Q8ND23 1372 aa12.28□□□□□ -0.44
PKP4-208ENST00000462335 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
PKP4-208ENST00000462335 H0YIN7 160 aa12.27□□□□□ -0.45
PKP4-208ENST00000462335 POLRMTO00411 1230 aaKnown RBP12.27□□□□□ -0.45
PKP4-208ENST00000462335 RGL2O15211 777 aa12.27□□□□□ -0.45
PKP4-208ENST00000462335 GPTP24298 496 aa12.27□□□□□ -0.45
PKP4-208ENST00000462335 EXOSC9Q06265 439 aaKnown RBP12.27□□□□□ -0.45
PKP4-208ENST00000462335 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
PKP4-208ENST00000462335 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
PKP4-208ENST00000462335 C4AP0C0L4 1744 aa12.27□□□□□ -0.45
PKP4-208ENST00000462335 FANCIQ9NVI1 1328 aa12.27□□□□□ -0.45
PKP4-208ENST00000462335 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
PKP4-208ENST00000462335 GRIN3BO60391 1043 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 PDE6BP35913 854 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 DDR1Q08345 913 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 HLFQ16534 295 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 PROSER3Q2NL68 480 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 NLGN2Q8NFZ4 835 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
PKP4-208ENST00000462335 PDIA6Q15084 440 aa12.25□□□□□ -0.45
PKP4-208ENST00000462335 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
PKP4-208ENST00000462335 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
PKP4-208ENST00000462335 C2CD5Q86YS7 1000 aa12.25□□□□□ -0.45
PKP4-208ENST00000462335 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
PKP4-208ENST00000462335 PLBD2Q8NHP8 589 aa12.25□□□□□ -0.45
PKP4-208ENST00000462335 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.451e-9■□□□□ 9.5
PKP4-208ENST00000462335 PIM2Q9P1W9 311 aa12.25□□□□□ -0.45
PKP4-208ENST00000462335 PDZRN3Q9UPQ7 1066 aa12.25□□□□□ -0.45
PKP4-208ENST00000462335 NEXNQ0ZGT2 675 aa12.24□□□□□ -0.45
PKP4-208ENST00000462335 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
PKP4-208ENST00000462335 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
PKP4-208ENST00000462335 DPEP1P16444 411 aa12.23□□□□□ -0.45
PKP4-208ENST00000462335 TCIRG1Q13488 830 aa12.23□□□□□ -0.45
PKP4-208ENST00000462335 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
PKP4-208ENST00000462335 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
PKP4-208ENST00000462335 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
PKP4-208ENST00000462335 TMX4Q9H1E5 349 aaPredicted RBP12.23□□□□□ -0.45
PKP4-208ENST00000462335 VAMP4O75379 141 aa12.22□□□□□ -0.45
PKP4-208ENST00000462335 HSP90B1P14625 803 aaKnown RBP12.22□□□□□ -0.45
PKP4-208ENST00000462335 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
PKP4-208ENST00000462335 FKBP5Q13451 457 aaPredicted RBP12.22□□□□□ -0.45
PKP4-208ENST00000462335 PHAXQ9H814 394 aaKnown RBP12.22□□□□□ -0.45
PKP4-208ENST00000462335 TRMT112Q9UI30 125 aaKnown RBP12.22□□□□□ -0.45
PKP4-208ENST00000462335 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.45
PKP4-208ENST00000462335 PRR5LQ6MZQ0 368 aa12.21□□□□□ -0.45
PKP4-208ENST00000462335 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
PKP4-208ENST00000462335 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
PKP4-208ENST00000462335 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 CHRNA5P30532 468 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 KSR2Q6VAB6 950 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 NUTM1Q86Y26 1132 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 ZNF34Q8IZ26 560 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 TTLL6Q8N841 843 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 NLRP3Q96P20 1036 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 MYD88Q99836 296 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
PKP4-208ENST00000462335 NUP98P52948 1817 aa12.19□□□□□ -0.46
PKP4-208ENST00000462335 ERFEQ4G0M1 354 aa12.19□□□□□ -0.46
PKP4-208ENST00000462335 SUSD4Q5VX71 490 aa12.19□□□□□ -0.46
PKP4-208ENST00000462335 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
PKP4-208ENST00000462335 SCN7AQ01118 1682 aa12.19□□□□□ -0.46
PKP4-208ENST00000462335 C10orf71Q711Q0 1435 aa12.19□□□□□ -0.46
PKP4-208ENST00000462335 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 ZNF521Q96K83 1311 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 PI4KAP2A4QPH2 592 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 ALDH1B1P30837 517 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 FLIIQ13045 1269 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 NLRP10Q86W26 655 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 PI4KAP1Q8N8J0 262 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 ZNF428Q96B54 188 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 MASTLQ96GX5 879 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 RBM17Q96I25 401 aaKnown RBP12.18□□□□□ -0.46
PKP4-208ENST00000462335 CWC25Q9NXE8 425 aaPredicted RBP12.18□□□□□ -0.46
PKP4-208ENST00000462335 ZNF219Q9P2Y4 722 aaPredicted RBP12.18□□□□□ -0.46
PKP4-208ENST00000462335 ATP10DQ9P241 1426 aa12.18□□□□□ -0.46
PKP4-208ENST00000462335 BCORQ6W2J9 1755 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms