RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 ZC3H4Q9UPT8 1303 aaKnown RBP23.3■■□□□ 1.32
COL1A2-202ENST00000461525 NFKBIEO00221 500 aa23.29■■□□□ 1.32
COL1A2-202ENST00000461525 STYK1Q6J9G0 422 aa23.29■■□□□ 1.32
COL1A2-202ENST00000461525 CNKSR1Q969H4 720 aa23.29■■□□□ 1.32
COL1A2-202ENST00000461525 ZNF219Q9P2Y4 722 aaPredicted RBP23.29■■□□□ 1.32
COL1A2-202ENST00000461525 TSPYL4Q9UJ04 414 aa23.29■■□□□ 1.32
COL1A2-202ENST00000461525 C21orf2O43822 256 aa23.28■■□□□ 1.32
COL1A2-202ENST00000461525 SRGNP10124 158 aa23.28■■□□□ 1.32
COL1A2-202ENST00000461525 LMOD3Q0VAK6 560 aa23.28■■□□□ 1.32
COL1A2-202ENST00000461525 NGEFQ8N5V2 710 aa23.28■■□□□ 1.32
COL1A2-202ENST00000461525 PRELPP51888 382 aa23.27■■□□□ 1.32
COL1A2-202ENST00000461525 HLFQ16534 295 aa23.27■■□□□ 1.32
COL1A2-202ENST00000461525 TPTE2Q6XPS3 522 aa23.27■■□□□ 1.32
COL1A2-202ENST00000461525 C16orf71Q8IYS4 520 aaPredicted RBP23.27■■□□□ 1.32
COL1A2-202ENST00000461525 MASTLQ96GX5 879 aa23.27■■□□□ 1.32
COL1A2-202ENST00000461525 RRP7AQ9Y3A4 280 aaKnown RBP23.27■■□□□ 1.32
COL1A2-202ENST00000461525 ANKRD31Q8N7Z5 1873 aa23.27■■□□□ 1.32
COL1A2-202ENST00000461525 KDM3BQ7LBC6 1761 aa23.27■■□□□ 1.32
COL1A2-202ENST00000461525 DLG5Q8TDM6 1919 aa23.26■■□□□ 1.31
COL1A2-202ENST00000461525 TMPOP42166 694 aaKnown RBP23.26■■□□□ 1.31
COL1A2-202ENST00000461525 LAMB4A4D0S4 1761 aa23.26■■□□□ 1.31
COL1A2-202ENST00000461525 FAM177BA6PVY3 158 aa23.25■■□□□ 1.31
COL1A2-202ENST00000461525 WDR43Q15061 677 aaKnown RBP eCLIP23.25■■□□□ 1.31
COL1A2-202ENST00000461525 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
COL1A2-202ENST00000461525 KIF6Q6ZMV9 814 aa23.25■■□□□ 1.31
COL1A2-202ENST00000461525 COL11A2P13942 1736 aaPredicted RBP23.25■■□□□ 1.31
COL1A2-202ENST00000461525 ERVV-1B6SEH8 477 aa23.24■■□□□ 1.31
COL1A2-202ENST00000461525 MYL6BP14649 208 aa23.24■■□□□ 1.31
COL1A2-202ENST00000461525 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
COL1A2-202ENST00000461525 ERBB4Q15303 1308 aa23.24■■□□□ 1.31
COL1A2-202ENST00000461525 MAP3K15Q6ZN16 1313 aa23.24■■□□□ 1.31
COL1A2-202ENST00000461525 GTF2E1P29083 439 aaPredicted RBP23.23■■□□□ 1.31
COL1A2-202ENST00000461525 SOGA3Q5TF21 947 aa23.23■■□□□ 1.31
COL1A2-202ENST00000461525 RBM46Q8TBY0 533 aaKnown RBP23.23■■□□□ 1.31
COL1A2-202ENST00000461525 RRAGCQ9HB90 399 aa23.23■■□□□ 1.31
COL1A2-202ENST00000461525 BABAM1Q9NWV8 329 aa23.23■■□□□ 1.31
COL1A2-202ENST00000461525 NPR1P16066 1061 aa23.22■■□□□ 1.31
COL1A2-202ENST00000461525 TTLL7Q6ZT98 887 aa23.22■■□□□ 1.31
COL1A2-202ENST00000461525 TAOK3Q9H2K8 898 aa23.22■■□□□ 1.31
COL1A2-202ENST00000461525 KLRG2A4D1S0 409 aaPredicted RBP23.21■■□□□ 1.31
COL1A2-202ENST00000461525 GLTPD2A6NH11 291 aa23.21■■□□□ 1.31
COL1A2-202ENST00000461525 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
COL1A2-202ENST00000461525 LTBP3Q9NS15 1303 aa23.21■■□□□ 1.31
COL1A2-202ENST00000461525 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
COL1A2-202ENST00000461525 NYXQ9GZU5 481 aa23.2■■□□□ 1.3
COL1A2-202ENST00000461525 ZBTB3Q9H5J0 574 aa23.2■■□□□ 1.3
COL1A2-202ENST00000461525 APLP1P51693 650 aa23.19■■□□□ 1.3
COL1A2-202ENST00000461525 ERFEQ4G0M1 354 aa23.19■■□□□ 1.3
COL1A2-202ENST00000461525 SBF1O95248 1867 aa23.19■■□□□ 1.3
COL1A2-202ENST00000461525 EIF2S2P20042 333 aaKnown RBP23.18■■□□□ 1.3
COL1A2-202ENST00000461525 PRKRIP1Q9H875 184 aaPredicted RBP23.18■■□□□ 1.3
COL1A2-202ENST00000461525 GPTP24298 496 aa23.17■■□□□ 1.3
COL1A2-202ENST00000461525 FSTL1Q12841 308 aa23.17■■□□□ 1.3
COL1A2-202ENST00000461525 CCDC93Q567U6 631 aa23.17■■□□□ 1.3
COL1A2-202ENST00000461525 ABCC12Q96J65 1359 aa23.16■■□□□ 1.3
COL1A2-202ENST00000461525 DPY19L2Q6NUT2 758 aa23.16■■□□□ 1.3
COL1A2-202ENST00000461525 NUTM1Q86Y26 1132 aa23.16■■□□□ 1.3
COL1A2-202ENST00000461525 C7orf43Q8WVR3 580 aa23.16■■□□□ 1.3
COL1A2-202ENST00000461525 ADAMTS8Q9UP79 889 aa23.16■■□□□ 1.3
COL1A2-202ENST00000461525 VEGFAP15692 232 aaPredicted RBP23.15■■□□□ 1.3
COL1A2-202ENST00000461525 PDIA6Q15084 440 aa23.15■■□□□ 1.3
COL1A2-202ENST00000461525 GIGYF2Q6Y7W6 1299 aaKnown RBP23.15■■□□□ 1.3
COL1A2-202ENST00000461525 TNRC6CQ9HCJ0 1690 aaKnown RBP23.15■■□□□ 1.3
COL1A2-202ENST00000461525 IBTKQ9P2D0 1353 aaPredicted RBP23.14■■□□□ 1.3
COL1A2-202ENST00000461525 UBN2Q6ZU65 1347 aa23.14■■□□□ 1.3
COL1A2-202ENST00000461525 CEP350Q5VT06 3117 aa23.14■■□□□ 1.3
COL1A2-202ENST00000461525 ALDH1B1P30837 517 aa23.14■■□□□ 1.29
COL1A2-202ENST00000461525 LRP10Q7Z4F1 713 aa23.14■■□□□ 1.29
COL1A2-202ENST00000461525 TRIM35Q9UPQ4 493 aa23.14■■□□□ 1.29
COL1A2-202ENST00000461525 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.29
COL1A2-202ENST00000461525 SLX4Q8IY92 1834 aa23.13■■□□□ 1.29
COL1A2-202ENST00000461525 CHL1O00533 1208 aa23.13■■□□□ 1.29
COL1A2-202ENST00000461525 SUSD4Q5VX71 490 aa23.13■■□□□ 1.29
COL1A2-202ENST00000461525 ZNF34Q8IZ26 560 aa23.13■■□□□ 1.29
COL1A2-202ENST00000461525 SMC1BQ8NDV3 1235 aa23.13■■□□□ 1.29
COL1A2-202ENST00000461525 TIAM2Q8IVF5 1701 aa23.13■■□□□ 1.29
COL1A2-202ENST00000461525 ANXA1P04083 346 aa23.12■■□□□ 1.29
COL1A2-202ENST00000461525 PROSER3Q2NL68 480 aa23.12■■□□□ 1.29
COL1A2-202ENST00000461525 CRY2Q49AN0 593 aa23.12■■□□□ 1.29
COL1A2-202ENST00000461525 NECTIN2Q92692 538 aa23.12■■□□□ 1.29
COL1A2-202ENST00000461525 PARP10Q53GL7 1025 aa23.11■■□□□ 1.29
COL1A2-202ENST00000461525 FER1L6Q2WGJ9 1857 aa23.11■■□□□ 1.29
COL1A2-202ENST00000461525 RIC1Q4ADV7 1423 aa23.1■■□□□ 1.29
COL1A2-202ENST00000461525 NTSR2O95665 410 aa23.1■■□□□ 1.29
COL1A2-202ENST00000461525 FKBP4Q02790 459 aaKnown RBP eCLIP23.1■■□□□ 1.29
COL1A2-202ENST00000461525 KRT24Q2M2I5 525 aa23.1■■□□□ 1.29
COL1A2-202ENST00000461525 PPP1R42Q7Z4L9 355 aa23.1■■□□□ 1.29
COL1A2-202ENST00000461525 RTKN2Q8IZC4 609 aa23.1■■□□□ 1.29
COL1A2-202ENST00000461525 RPGRQ92834 1020 aaKnown RBP23.1■■□□□ 1.29
COL1A2-202ENST00000461525 ARFGEF2Q9Y6D5 1785 aa23.09■■□□□ 1.29
COL1A2-202ENST00000461525 OLFM4Q6UX06 510 aa23.09■■□□□ 1.29
COL1A2-202ENST00000461525 AIMP1Q12904 312 aaKnown RBP23.08■■□□□ 1.29
COL1A2-202ENST00000461525 COPS6Q7L5N1 327 aa23.08■■□□□ 1.29
COL1A2-202ENST00000461525 XAGE3Q8WTP9 111 aa23.08■■□□□ 1.29
COL1A2-202ENST00000461525 DDX21Q9NR30 783 aaKnown RBP eCLIP23.08■■□□□ 1.29
COL1A2-202ENST00000461525 ZNF277Q9NRM2 450 aaPredicted RBP23.08■■□□□ 1.29
COL1A2-202ENST00000461525 POTECB2RU33 542 aa23.06■■□□□ 1.28
COL1A2-202ENST00000461525 DDNO94850 711 aaPredicted RBP23.06■■□□□ 1.28
COL1A2-202ENST00000461525 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
COL1A2-202ENST00000461525 HSP90AB3PQ58FF7 597 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms