RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 ZPR1O75312 459 aa14.47□□□□□ -0.09
SSBP1-202ENST00000461433 ZBTB7AO95365 584 aa14.47□□□□□ -0.09
SSBP1-202ENST00000461433 RARSP54136 660 aaKnown RBP14.47□□□□□ -0.09
SSBP1-202ENST00000461433 FKBP8Q14318 412 aa14.47□□□□□ -0.09
SSBP1-202ENST00000461433 ALDH1L2Q3SY69 923 aa14.47□□□□□ -0.09
SSBP1-202ENST00000461433 NPM2Q86SE8 214 aaKnown RBP14.47□□□□□ -0.09
SSBP1-202ENST00000461433 MRPL50Q8N5N7 158 aaKnown RBP14.47□□□□□ -0.09
SSBP1-202ENST00000461433 ARXQ96QS3 562 aa14.47□□□□□ -0.09
SSBP1-202ENST00000461433 MAP3K15Q6ZN16 1313 aa14.47□□□□□ -0.09
SSBP1-202ENST00000461433 ERVV-1B6SEH8 477 aa14.46□□□□□ -0.09
SSBP1-202ENST00000461433 HLFQ16534 295 aa14.46□□□□□ -0.09
SSBP1-202ENST00000461433 ARFGEF2Q9Y6D5 1785 aa14.46□□□□□ -0.1
SSBP1-202ENST00000461433 MSL1Q68DK7 614 aa14.46□□□□□ -0.1
SSBP1-202ENST00000461433 BCL2L13Q9BXK5 485 aa14.46□□□□□ -0.1
SSBP1-202ENST00000461433 MTFR1LQ9H019 292 aa14.46□□□□□ -0.1
SSBP1-202ENST00000461433 ZBTB3Q9H5J0 574 aa14.46□□□□□ -0.1
SSBP1-202ENST00000461433 RGL2O15211 777 aa14.45□□□□□ -0.1
SSBP1-202ENST00000461433 FLIIQ13045 1269 aa14.45□□□□□ -0.1
SSBP1-202ENST00000461433 CLEC4GQ6UXB4 293 aa14.45□□□□□ -0.1
SSBP1-202ENST00000461433 KIF6Q6ZMV9 814 aa14.45□□□□□ -0.1
SSBP1-202ENST00000461433 ANKRD13DQ6ZTN6 518 aa14.45□□□□□ -0.1
SSBP1-202ENST00000461433 SGIP1Q9BQI5 828 aa14.45□□□□□ -0.1
SSBP1-202ENST00000461433 ATF5Q9Y2D1 282 aaPredicted RBP14.45□□□□□ -0.1
SSBP1-202ENST00000461433 TM4SF1P30408 202 aa14.44□□□□□ -0.1
SSBP1-202ENST00000461433 BRPF1P55201 1214 aaPredicted RBP14.44□□□□□ -0.1
SSBP1-202ENST00000461433 NLGN1Q8N2Q7 840 aa14.44□□□□□ -0.1
SSBP1-202ENST00000461433 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
SSBP1-202ENST00000461433 ANKRD36CQ5JPF3 1778 aa14.43□□□□□ -0.1
SSBP1-202ENST00000461433 ADCY9O60503 1353 aa14.43□□□□□ -0.1
SSBP1-202ENST00000461433 BCAR3O75815 825 aa14.43□□□□□ -0.1
SSBP1-202ENST00000461433 PTGER2P43116 358 aa14.43□□□□□ -0.1
SSBP1-202ENST00000461433 TBC1D9BQ66K14 1250 aa14.43□□□□□ -0.1
SSBP1-202ENST00000461433 GIGYF2Q6Y7W6 1299 aaKnown RBP14.43□□□□□ -0.1
SSBP1-202ENST00000461433 NFIXQ14938 502 aa14.42□□□□□ -0.1
SSBP1-202ENST00000461433 SMC4Q9NTJ3 1288 aa14.42□□□□□ -0.1
SSBP1-202ENST00000461433 PI4KAP2A4QPH2 592 aa14.42□□□□□ -0.1
SSBP1-202ENST00000461433 KSR2Q6VAB6 950 aa14.42□□□□□ -0.1
SSBP1-202ENST00000461433 PI4KAP1Q8N8J0 262 aa14.42□□□□□ -0.1
SSBP1-202ENST00000461433 AFDNP55196 1824 aaKnown RBP14.41□□□□□ -0.1
SSBP1-202ENST00000461433 ATP10DQ9P241 1426 aa14.41□□□□□ -0.1
SSBP1-202ENST00000461433 DDR1Q08345 913 aa14.41□□□□□ -0.1
SSBP1-202ENST00000461433 FKBP5Q13451 457 aaPredicted RBP14.41□□□□□ -0.1
SSBP1-202ENST00000461433 ZNF34Q8IZ26 560 aa14.41□□□□□ -0.1
SSBP1-202ENST00000461433 ZNF652Q9Y2D9 606 aa14.41□□□□□ -0.1
SSBP1-202ENST00000461433 NRXN2Q9P2S2 1712 aa14.4□□□□□ -0.1
SSBP1-202ENST00000461433 DDX58O95786 925 aaKnown RBP14.4□□□□□ -0.1
SSBP1-202ENST00000461433 MMP10P09238 476 aa14.4□□□□□ -0.1
SSBP1-202ENST00000461433 TCIRG1Q13488 830 aa14.4□□□□□ -0.1
SSBP1-202ENST00000461433 BICDL1Q6ZP65 573 aa14.4□□□□□ -0.1
SSBP1-202ENST00000461433 RIC3Q7Z5B4 369 aa14.4□□□□□ -0.1
SSBP1-202ENST00000461433 SPON1Q9HCB6 807 aa14.4□□□□□ -0.1
SSBP1-202ENST00000461433 MAP3K2Q9Y2U5 619 aa14.4□□□□□ -0.1
SSBP1-202ENST00000461433 POLRMTO00411 1230 aaKnown RBP14.39□□□□□ -0.11
SSBP1-202ENST00000461433 METTL22Q9BUU2 404 aaPredicted RBP14.39□□□□□ -0.11
SSBP1-202ENST00000461433 NOB1Q9ULX3 412 aaKnown RBP14.39□□□□□ -0.11
SSBP1-202ENST00000461433 UBN2Q6ZU65 1347 aa14.39□□□□□ -0.11
SSBP1-202ENST00000461433 F6X3S4 739 aa14.39□□□□□ -0.11
SSBP1-202ENST00000461433 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
SSBP1-202ENST00000461433 RCAN3Q9UKA8 241 aa14.39□□□□□ -0.11
SSBP1-202ENST00000461433 NIP7Q9Y221 180 aaKnown RBP eCLIP14.39□□□□□ -0.11
SSBP1-202ENST00000461433 PTPRCP08575 1304 aa14.39□□□□□ -0.11
SSBP1-202ENST00000461433 GPTP24298 496 aa14.38□□□□□ -0.11
SSBP1-202ENST00000461433 HSP90AB3PQ58FF7 597 aa14.38□□□□□ -0.11
SSBP1-202ENST00000461433 SETDB2Q96T68 719 aa14.38□□□□□ -0.11
SSBP1-202ENST00000461433 LRP5O75197 1615 aa14.38□□□□□ -0.11
SSBP1-202ENST00000461433 ATP5J2-PTCD1G3V325 749 aa14.37□□□□□ -0.11
SSBP1-202ENST00000461433 IGKV5-2P06315 115 aa14.37□□□□□ -0.11
SSBP1-202ENST00000461433 DNAAF4Q8WXU2 420 aa14.37□□□□□ -0.11
SSBP1-202ENST00000461433 MYD88Q99836 296 aa14.37□□□□□ -0.11
SSBP1-202ENST00000461433 SERPINB2P05120 415 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 TRIM28Q13263 835 aaKnown RBP14.36□□□□□ -0.11
SSBP1-202ENST00000461433 SUSD4Q5VX71 490 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 NLRP10Q86W26 655 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 CARMIL3Q8ND23 1372 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 ARHGAP45Q92619 1136 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 KIF16BQ96L93 1317 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 PARP3Q9Y6F1 533 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 POLD1P28340 1107 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 TNNQ9UQP3 1299 aa14.36□□□□□ -0.11
SSBP1-202ENST00000461433 KIF13BQ9NQT8 1826 aa14.35□□□□□ -0.11
SSBP1-202ENST00000461433 PARP10Q53GL7 1025 aa14.35□□□□□ -0.11
SSBP1-202ENST00000461433 BEND3Q5T5X7 828 aa14.35□□□□□ -0.11
SSBP1-202ENST00000461433 N4BP2Q86UW6 1770 aaPredicted RBP14.35□□□□□ -0.11
SSBP1-202ENST00000461433 NEURL1BA8MQ27 555 aa14.34□□□□□ -0.11
SSBP1-202ENST00000461433 NTSR2O95665 410 aa14.34□□□□□ -0.11
SSBP1-202ENST00000461433 TRIM27P14373 513 aa14.34□□□□□ -0.11
SSBP1-202ENST00000461433 CWF19L2Q2TBE0 894 aaKnown RBP14.34□□□□□ -0.11
SSBP1-202ENST00000461433 PRR5LQ6MZQ0 368 aa14.34□□□□□ -0.11
SSBP1-202ENST00000461433 FRAT1Q92837 279 aaPredicted RBP14.34□□□□□ -0.11
SSBP1-202ENST00000461433 ANKRD31Q8N7Z5 1873 aa14.34□□□□□ -0.11
SSBP1-202ENST00000461433 IBTKQ9P2D0 1353 aaPredicted RBP14.34□□□□□ -0.11
SSBP1-202ENST00000461433 FAM177BA6PVY3 158 aa14.33□□□□□ -0.11
SSBP1-202ENST00000461433 ATF7IPQ6VMQ6 1270 aa14.33□□□□□ -0.11
SSBP1-202ENST00000461433 NBPF5PQ86XG9 351 aaPredicted RBP14.33□□□□□ -0.11
SSBP1-202ENST00000461433 CCDC191Q8NCU4 936 aa14.33□□□□□ -0.11
SSBP1-202ENST00000461433 LINS1Q8NG48 757 aa14.33□□□□□ -0.11
SSBP1-202ENST00000461433 API5Q9BZZ5 524 aaKnown RBP14.33□□□□□ -0.11
SSBP1-202ENST00000461433 PXDNLA1KZ92 1463 aa14.33□□□□□ -0.12
SSBP1-202ENST00000461433 SRCAPQ6ZRS2 3230 aa14.33□□□□□ -0.12
SSBP1-202ENST00000461433 IPO8O15397 1037 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms