RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 KSR2Q6VAB6 950 aa13.74□□□□□ -0.21
COPS7B-217ENST00000461350 PIGBQ92521 554 aa13.74□□□□□ -0.21
COPS7B-217ENST00000461350 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
COPS7B-217ENST00000461350 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
COPS7B-217ENST00000461350 K7ELQ4 463 aaPredicted RBP13.73□□□□□ -0.21
COPS7B-217ENST00000461350 DCTPP1Q9H773 170 aa13.73□□□□□ -0.21
COPS7B-217ENST00000461350 PTMSP20962 102 aa13.73□□□□□ -0.21
COPS7B-217ENST00000461350 PXDNLA1KZ92 1463 aa13.73□□□□□ -0.21
COPS7B-217ENST00000461350 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-217ENST00000461350 CERKQ8TCT0 537 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 NGLY1Q96IV0 654 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 GLI3P10071 1580 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 NRAPQ86VF7 1730 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 TBC1D9Q6ZT07 1266 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 A1BGP04217 495 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 SSFA2P28290 1259 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 C16orf71Q8IYS4 520 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-217ENST00000461350 KIF2CQ99661 725 aa13.72□□□□□ -0.21
COPS7B-217ENST00000461350 ANP32BQ92688 251 aaKnown RBP13.71□□□□□ -0.21
COPS7B-217ENST00000461350 EXOC6BQ9Y2D4 811 aa13.71□□□□□ -0.21
COPS7B-217ENST00000461350 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.21
COPS7B-217ENST00000461350 NBPF26B4DH59 902 aa13.71□□□□□ -0.22
COPS7B-217ENST00000461350 NBPF14Q5TI25 921 aa13.71□□□□□ -0.22
COPS7B-217ENST00000461350 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.22
COPS7B-217ENST00000461350 LRP10Q7Z4F1 713 aa13.71□□□□□ -0.22
COPS7B-217ENST00000461350 NBPF15Q8N660 670 aa13.71□□□□□ -0.22
COPS7B-217ENST00000461350 KCPQ6ZWJ8 1503 aa13.71□□□□□ -0.22
COPS7B-217ENST00000461350 DDX58O95786 925 aaKnown RBP13.7□□□□□ -0.22
COPS7B-217ENST00000461350 DDB1Q16531 1140 aa13.7□□□□□ -0.22
COPS7B-217ENST00000461350 DDX49Q9Y6V7 483 aaKnown RBP13.7□□□□□ -0.22
COPS7B-217ENST00000461350 ITGB4P16144 1822 aa13.7□□□□□ -0.22
COPS7B-217ENST00000461350 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
COPS7B-217ENST00000461350 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
COPS7B-217ENST00000461350 JCADQ9P266 1359 aa13.7□□□□□ -0.22
COPS7B-217ENST00000461350 RRP9O43818 475 aaKnown RBP13.7□□□□□ -0.22
COPS7B-217ENST00000461350 OTUD7AQ8TE49 926 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-217ENST00000461350 ATG3Q9NT62 314 aa13.7□□□□□ -0.22
COPS7B-217ENST00000461350 SLIT2O94813 1529 aa13.69□□□□□ -0.22
COPS7B-217ENST00000461350 HMMRO75330 724 aa13.69□□□□□ -0.22
COPS7B-217ENST00000461350 PRIM1P49642 420 aaKnown RBP13.69□□□□□ -0.22
COPS7B-217ENST00000461350 ACSBG1Q96GR2 724 aa13.69□□□□□ -0.22
COPS7B-217ENST00000461350 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-217ENST00000461350 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
COPS7B-217ENST00000461350 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-217ENST00000461350 ATP8B2P98198 1209 aa13.69□□□□□ -0.22
COPS7B-217ENST00000461350 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
COPS7B-217ENST00000461350 ANKRD13DQ6ZTN6 518 aa13.69□□□□□ -0.22
COPS7B-217ENST00000461350 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
COPS7B-217ENST00000461350 ZNF330Q9Y3S2 320 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-217ENST00000461350 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
COPS7B-217ENST00000461350 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-217ENST00000461350 MYD88Q99836 296 aa13.68□□□□□ -0.22
COPS7B-217ENST00000461350 WNK3Q9BYP7 1800 aa13.68□□□□□ -0.22
COPS7B-217ENST00000461350 TNS2Q63HR2 1409 aa13.68□□□□□ -0.22
COPS7B-217ENST00000461350 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
COPS7B-217ENST00000461350 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
COPS7B-217ENST00000461350 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
COPS7B-217ENST00000461350 PPP1R42Q7Z4L9 355 aa13.68□□□□□ -0.22
COPS7B-217ENST00000461350 DNAJC10Q8IXB1 793 aa13.68□□□□□ -0.22
COPS7B-217ENST00000461350 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
COPS7B-217ENST00000461350 CDC45O75419 566 aa13.67□□□□□ -0.22
COPS7B-217ENST00000461350 HSPA1LP34931 641 aa13.67□□□□□ -0.22
COPS7B-217ENST00000461350 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
COPS7B-217ENST00000461350 MARCH10Q8NA82 808 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-217ENST00000461350 LINS1Q8NG48 757 aa13.67□□□□□ -0.22
COPS7B-217ENST00000461350 THRAP3Q9Y2W1 955 aaKnown RBP13.67□□□□□ -0.22
COPS7B-217ENST00000461350 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
COPS7B-217ENST00000461350 CCDC173Q0VFZ6 552 aa13.66□□□□□ -0.22
COPS7B-217ENST00000461350 SRGAP3O43295 1099 aa13.66□□□□□ -0.22
COPS7B-217ENST00000461350 ALDH1L1O75891 902 aa13.66□□□□□ -0.22
COPS7B-217ENST00000461350 LRP6O75581 1613 aa13.66□□□□□ -0.22
COPS7B-217ENST00000461350 NWD2Q9ULI1 1742 aa13.66□□□□□ -0.22
COPS7B-217ENST00000461350 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
COPS7B-217ENST00000461350 BCL9O00512 1426 aa13.65□□□□□ -0.22
COPS7B-217ENST00000461350 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
COPS7B-217ENST00000461350 NEXNQ0ZGT2 675 aa13.65□□□□□ -0.22
COPS7B-217ENST00000461350 SLC4A9Q96Q91 983 aa13.65□□□□□ -0.22
COPS7B-217ENST00000461350 METTL22Q9BUU2 404 aaPredicted RBP13.65□□□□□ -0.22
COPS7B-217ENST00000461350 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
COPS7B-217ENST00000461350 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
COPS7B-217ENST00000461350 GRM8O00222 908 aa13.65□□□□□ -0.22
COPS7B-217ENST00000461350 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
COPS7B-217ENST00000461350 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
COPS7B-217ENST00000461350 KLHL40Q2TBA0 621 aa13.65□□□□□ -0.23
COPS7B-217ENST00000461350 MCTP1Q6DN14 999 aa13.65□□□□□ -0.23
COPS7B-217ENST00000461350 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.23
COPS7B-217ENST00000461350 SUCLG2Q96I99 432 aa13.64□□□□□ -0.23
COPS7B-217ENST00000461350 MSNP26038 577 aaKnown RBP13.64□□□□□ -0.23
COPS7B-217ENST00000461350 SSH3Q8TE77 659 aa13.64□□□□□ -0.23
COPS7B-217ENST00000461350 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
COPS7B-217ENST00000461350 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 USP21Q9UK80 565 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 GCKRQ14397 625 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 TSHZ3Q63HK5 1081 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 KCNQ2O43526 872 aa13.63□□□□□ -0.23
COPS7B-217ENST00000461350 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
COPS7B-217ENST00000461350 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
COPS7B-217ENST00000461350 KIAA1211Q6ZU35 1233 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms