RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 KLRG2A4D1S0 409 aaPredicted RBP19.53■□□□□ 0.72
DNMT3A-207ENST00000461228 ERFEQ4G0M1 354 aa19.53■□□□□ 0.72
DNMT3A-207ENST00000461228 PRPF40BQ6NWY9 871 aaKnown RBP19.53■□□□□ 0.72
DNMT3A-207ENST00000461228 MASTLQ96GX5 879 aa19.53■□□□□ 0.72
DNMT3A-207ENST00000461228 CFAP53Q96M91 514 aa19.53■□□□□ 0.72
DNMT3A-207ENST00000461228 THSD7BQ9C0I4 1608 aa19.53■□□□□ 0.72
DNMT3A-207ENST00000461228 IBTKQ9P2D0 1353 aaPredicted RBP19.53■□□□□ 0.72
DNMT3A-207ENST00000461228 U2SURPO15042 1029 aaKnown RBP19.52■□□□□ 0.72
DNMT3A-207ENST00000461228 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
DNMT3A-207ENST00000461228 NUP98P52948 1817 aa19.52■□□□□ 0.72
DNMT3A-207ENST00000461228 IQCA1LA6NCM1 817 aa19.51■□□□□ 0.71
DNMT3A-207ENST00000461228 BTBD11A6QL63 1104 aa19.51■□□□□ 0.71
DNMT3A-207ENST00000461228 HTATSF1O43719 755 aaKnown RBP19.51■□□□□ 0.71
DNMT3A-207ENST00000461228 BICDL1Q6ZP65 573 aa19.51■□□□□ 0.71
DNMT3A-207ENST00000461228 DZIP3Q86Y13 1208 aaKnown RBP19.51■□□□□ 0.71
DNMT3A-207ENST00000461228 C21orf2O43822 256 aa19.5■□□□□ 0.71
DNMT3A-207ENST00000461228 PRKAR2BP31323 418 aa19.5■□□□□ 0.71
DNMT3A-207ENST00000461228 COL13A1Q5TAT6 717 aaPredicted RBP19.5■□□□□ 0.71
DNMT3A-207ENST00000461228 ZNF622Q969S3 477 aaKnown RBP eCLIP19.5■□□□□ 0.71
DNMT3A-207ENST00000461228 TBC1D2BQ9UPU7 963 aa19.5■□□□□ 0.71
DNMT3A-207ENST00000461228 SNRPA1P09661 255 aaKnown RBP19.49■□□□□ 0.71
DNMT3A-207ENST00000461228 CCDC93Q567U6 631 aa19.49■□□□□ 0.71
DNMT3A-207ENST00000461228 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
DNMT3A-207ENST00000461228 C7orf43Q8WVR3 580 aa19.49■□□□□ 0.71
DNMT3A-207ENST00000461228 A1BGP04217 495 aa19.48■□□□□ 0.71
DNMT3A-207ENST00000461228 NUDCQ9Y266 331 aa19.48■□□□□ 0.71
DNMT3A-207ENST00000461228 NPR1P16066 1061 aa19.47■□□□□ 0.71
DNMT3A-207ENST00000461228 PASKQ96RG2 1323 aa19.47■□□□□ 0.71
DNMT3A-207ENST00000461228 HSPA1AP0DMV8 641 aaKnown RBP19.46■□□□□ 0.71
DNMT3A-207ENST00000461228 HSPA1BP0DMV9 641 aaKnown RBP19.46■□□□□ 0.71
DNMT3A-207ENST00000461228 LDHDQ86WU2 507 aa19.46■□□□□ 0.71
DNMT3A-207ENST00000461228 PHACTR3Q96KR7 559 aa19.46■□□□□ 0.71
DNMT3A-207ENST00000461228 ZNF330Q9Y3S2 320 aaPredicted RBP19.46■□□□□ 0.71
DNMT3A-207ENST00000461228 CNTNAP1P78357 1384 aa19.45■□□□□ 0.7
DNMT3A-207ENST00000461228 NPHP1O15259 732 aa19.45■□□□□ 0.7
DNMT3A-207ENST00000461228 NBPF5PQ86XG9 351 aaPredicted RBP19.45■□□□□ 0.7
DNMT3A-207ENST00000461228 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
DNMT3A-207ENST00000461228 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
DNMT3A-207ENST00000461228 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
DNMT3A-207ENST00000461228 FKBP4Q02790 459 aaKnown RBP eCLIP19.44■□□□□ 0.7
DNMT3A-207ENST00000461228 CRY2Q49AN0 593 aa19.43■□□□□ 0.7
DNMT3A-207ENST00000461228 TPTE2Q6XPS3 522 aa19.43■□□□□ 0.7
DNMT3A-207ENST00000461228 RTKN2Q8IZC4 609 aa19.43■□□□□ 0.7
DNMT3A-207ENST00000461228 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
DNMT3A-207ENST00000461228 GRIPAP1Q4V328 841 aa19.42■□□□□ 0.7
DNMT3A-207ENST00000461228 KCNQ3O43525 872 aa19.41■□□□□ 0.7
DNMT3A-207ENST00000461228 PSMD1Q99460 953 aa19.41■□□□□ 0.7
DNMT3A-207ENST00000461228 TRPM7Q96QT4 1865 aa19.4■□□□□ 0.7
DNMT3A-207ENST00000461228 DDNO94850 711 aaPredicted RBP19.4■□□□□ 0.7
DNMT3A-207ENST00000461228 CC2D2BQ6DHV5 1058 aa19.4■□□□□ 0.7
DNMT3A-207ENST00000461228 TAF1DQ9H5J8 278 aaPredicted RBP19.4■□□□□ 0.7
DNMT3A-207ENST00000461228 NBPF26B4DH59 902 aa19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 ERVV-1B6SEH8 477 aa19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 PPP2R1AP30153 589 aa19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 ALDH1B1P30837 517 aa19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 NBPF10Q6P3W6 841 aaKnown RBP19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 NBPF15Q8N660 670 aa19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 PNISRQ8TF01 805 aaKnown RBP19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 NYXQ9GZU5 481 aa19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 NIP7Q9Y221 180 aaKnown RBP eCLIP19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 ERBB4Q15303 1308 aa19.39■□□□□ 0.69
DNMT3A-207ENST00000461228 FZD9O00144 591 aa19.38■□□□□ 0.69
DNMT3A-207ENST00000461228 U2AF1L5P0DN76 240 aaPredicted RBP19.38■□□□□ 0.69
DNMT3A-207ENST00000461228 U2AF1Q01081 240 aaKnown RBP eCLIP19.38■□□□□ 0.69
DNMT3A-207ENST00000461228 LTBP1Q14766 1721 aa19.38■□□□□ 0.69
DNMT3A-207ENST00000461228 PNMA8AQ86V59 439 aaPredicted RBP19.38■□□□□ 0.69
DNMT3A-207ENST00000461228 CCDC24Q8N4L8 307 aa19.38■□□□□ 0.69
DNMT3A-207ENST00000461228 ABCC12Q96J65 1359 aa19.38■□□□□ 0.69
DNMT3A-207ENST00000461228 ZNF541Q9H0D2 1346 aa19.37■□□□□ 0.69
DNMT3A-207ENST00000461228 MCM10Q7L590 875 aa19.37■□□□□ 0.69
DNMT3A-207ENST00000461228 GPC2Q8N158 579 aa19.37■□□□□ 0.69
DNMT3A-207ENST00000461228 HACL1Q9UJ83 578 aa19.37■□□□□ 0.69
DNMT3A-207ENST00000461228 LAMB2P55268 1798 aa19.37■□□□□ 0.69
DNMT3A-207ENST00000461228 PRAMEF22A3QJZ6 481 aa19.36■□□□□ 0.69
DNMT3A-207ENST00000461228 POTEIP0CG38 1075 aa19.36■□□□□ 0.69
DNMT3A-207ENST00000461228 POTEJP0CG39 1038 aa19.36■□□□□ 0.69
DNMT3A-207ENST00000461228 TAF7Q15545 349 aaPredicted RBP19.36■□□□□ 0.69
DNMT3A-207ENST00000461228 PRDM10Q9NQV6 1147 aa19.36■□□□□ 0.69
DNMT3A-207ENST00000461228 ZNF219Q9P2Y4 722 aaPredicted RBP19.36■□□□□ 0.69
DNMT3A-207ENST00000461228 LRRC37AA6NMS7 1700 aa19.36■□□□□ 0.69
DNMT3A-207ENST00000461228 COL4A5P29400 1685 aa19.36■□□□□ 0.69
DNMT3A-207ENST00000461228 RNF123Q5XPI4 1314 aa19.35■□□□□ 0.69
DNMT3A-207ENST00000461228 IARSP41252 1262 aaKnown RBP19.35■□□□□ 0.69
DNMT3A-207ENST00000461228 MAP3K15Q6ZN16 1313 aa19.34■□□□□ 0.69
DNMT3A-207ENST00000461228 TMEM88BA6NKF7 163 aa19.34■□□□□ 0.69
DNMT3A-207ENST00000461228 ITGBL1O95965 494 aaPredicted RBP19.34■□□□□ 0.69
DNMT3A-207ENST00000461228 HOXA10P31260 410 aaPredicted RBP19.34■□□□□ 0.69
DNMT3A-207ENST00000461228 RASSF10A6NK89 507 aa19.33■□□□□ 0.68
DNMT3A-207ENST00000461228 EPHX2P34913 555 aa19.32■□□□□ 0.68
DNMT3A-207ENST00000461228 PIP4K2AP48426 406 aaPredicted RBP19.32■□□□□ 0.68
DNMT3A-207ENST00000461228 ZNF277Q9NRM2 450 aaPredicted RBP19.32■□□□□ 0.68
DNMT3A-207ENST00000461228 NEFMP07197 916 aa19.31■□□□□ 0.68
DNMT3A-207ENST00000461228 MKRN1Q9UHC7 482 aaKnown RBP19.31■□□□□ 0.68
DNMT3A-207ENST00000461228 DDX60Q8IY21 1712 aaKnown RBP19.31■□□□□ 0.68
DNMT3A-207ENST00000461228 HLFQ16534 295 aa19.3■□□□□ 0.68
DNMT3A-207ENST00000461228 KIF6Q6ZMV9 814 aa19.3■□□□□ 0.68
DNMT3A-207ENST00000461228 VPS33BQ9H267 617 aa19.3■□□□□ 0.68
DNMT3A-207ENST00000461228 UBN2Q6ZU65 1347 aa19.29■□□□□ 0.68
DNMT3A-207ENST00000461228 CDHR2Q9BYE9 1310 aa19.29■□□□□ 0.68
DNMT3A-207ENST00000461228 CTCFP49711 727 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms