RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 SMARCC1Q92922 1105 aaPredicted RBP21.14■□□□□ 0.98
NELFCD-201ENST00000460601 METTL22Q9BUU2 404 aaPredicted RBP21.14■□□□□ 0.98
NELFCD-201ENST00000460601 LRRFIP2Q9Y608 721 aaKnown RBP21.14■□□□□ 0.98
NELFCD-201ENST00000460601 CRKLP46109 303 aaKnown RBP21.14■□□□□ 0.97
NELFCD-201ENST00000460601 LINS1Q8NG48 757 aa21.14■□□□□ 0.97
NELFCD-201ENST00000460601 PLBD2Q8NHP8 589 aa21.14■□□□□ 0.97
NELFCD-201ENST00000460601 UBTFL1P0CB47 393 aaPredicted RBP21.13■□□□□ 0.97
NELFCD-201ENST00000460601 POTEAQ6S8J7 498 aa21.13■□□□□ 0.97
NELFCD-201ENST00000460601 INTS5Q6P9B9 1019 aaKnown RBP21.13■□□□□ 0.97
NELFCD-201ENST00000460601 GNAI2P04899 355 aa21.12■□□□□ 0.97
NELFCD-201ENST00000460601 GNAI3P08754 354 aa21.12■□□□□ 0.97
NELFCD-201ENST00000460601 NUP188Q5SRE5 1749 aa21.12■□□□□ 0.97
NELFCD-201ENST00000460601 NEURL1BA8MQ27 555 aa21.11■□□□□ 0.97
NELFCD-201ENST00000460601 RXRBP28702 533 aa21.11■□□□□ 0.97
NELFCD-201ENST00000460601 MYH14Q7Z406 1995 aaKnown RBP21.11■□□□□ 0.97
NELFCD-201ENST00000460601 LINC00116Q8NCU8 138 aa21.11■□□□□ 0.97
NELFCD-201ENST00000460601 NEXNQ0ZGT2 675 aa21.11■□□□□ 0.97
NELFCD-201ENST00000460601 ANKRD44Q8N8A2 993 aa21.11■□□□□ 0.97
NELFCD-201ENST00000460601 JARID2Q92833 1246 aaPredicted RBP21.11■□□□□ 0.97
NELFCD-201ENST00000460601 ALDH1L1O75891 902 aa21.1■□□□□ 0.97
NELFCD-201ENST00000460601 TRIM37O94972 964 aa21.1■□□□□ 0.97
NELFCD-201ENST00000460601 C9orf78Q9NZ63 289 aaPredicted RBP21.1■□□□□ 0.97
NELFCD-201ENST00000460601 PNMA6EA0A0J9YXQ4 647 aa21.1■□□□□ 0.97
NELFCD-201ENST00000460601 RGS3P49796 1198 aa21.1■□□□□ 0.97
NELFCD-201ENST00000460601 CCDC87Q9NVE4 849 aa21.1■□□□□ 0.97
NELFCD-201ENST00000460601 FAM196AQ6ZSG2 479 aa21.09■□□□□ 0.97
NELFCD-201ENST00000460601 SMIM5Q71RC9 77 aa21.09■□□□□ 0.97
NELFCD-201ENST00000460601 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
NELFCD-201ENST00000460601 COL5A3P25940 1745 aaPredicted RBP21.09■□□□□ 0.97
NELFCD-201ENST00000460601 SMC5Q8IY18 1101 aa21.08■□□□□ 0.97
NELFCD-201ENST00000460601 BCL11BQ9C0K0 894 aaPredicted RBP21.08■□□□□ 0.97
NELFCD-201ENST00000460601 TBC1D2BQ9UPU7 963 aa21.08■□□□□ 0.97
NELFCD-201ENST00000460601 CICQ96RK0 1608 aaPredicted RBP21.08■□□□□ 0.97
NELFCD-201ENST00000460601 GRM8O00222 908 aa21.08■□□□□ 0.96
NELFCD-201ENST00000460601 GCKRQ14397 625 aa21.08■□□□□ 0.96
NELFCD-201ENST00000460601 RPAP2Q8IXW5 612 aaPredicted RBP21.08■□□□□ 0.96
NELFCD-201ENST00000460601 AFDNP55196 1824 aaKnown RBP21.07■□□□□ 0.96
NELFCD-201ENST00000460601 HLFQ16534 295 aa21.07■□□□□ 0.96
NELFCD-201ENST00000460601 IL6STP40189 918 aaPredicted RBP21.07■□□□□ 0.96
NELFCD-201ENST00000460601 CCNL1Q9UK58 526 aaPredicted RBP21.07■□□□□ 0.96
NELFCD-201ENST00000460601 RTL5Q5HYW3 569 aaPredicted RBP21.06■□□□□ 0.96
NELFCD-201ENST00000460601 KIF6Q6ZMV9 814 aa21.06■□□□□ 0.96
NELFCD-201ENST00000460601 EIF5P55010 431 aaKnown RBP21.05■□□□□ 0.96
NELFCD-201ENST00000460601 KAZALD1Q96I82 304 aa21.05■□□□□ 0.96
NELFCD-201ENST00000460601 BCL11AQ9H165 835 aa21.05■□□□□ 0.96
NELFCD-201ENST00000460601 MAP3K15Q6ZN16 1313 aa21.05■□□□□ 0.96
NELFCD-201ENST00000460601 DZIP3Q86Y13 1208 aaKnown RBP21.05■□□□□ 0.96
NELFCD-201ENST00000460601 SUCLG2Q96I99 432 aa21.05■□□□□ 0.96
NELFCD-201ENST00000460601 LY75O60449 1722 aa21.04■□□□□ 0.96
NELFCD-201ENST00000460601 ZNF831Q5JPB2 1677 aa21.04■□□□□ 0.96
NELFCD-201ENST00000460601 RREB1Q92766 1687 aa21.04■□□□□ 0.96
NELFCD-201ENST00000460601 APBB1O00213 710 aa21.04■□□□□ 0.96
NELFCD-201ENST00000460601 UBE3BQ7Z3V4 1068 aa21.04■□□□□ 0.96
NELFCD-201ENST00000460601 LRRC4BQ9NT99 713 aa21.04■□□□□ 0.96
NELFCD-201ENST00000460601 UTYO14607 1347 aa21.03■□□□□ 0.96
NELFCD-201ENST00000460601 A0A087WZG4 1122 aa21.02■□□□□ 0.96
NELFCD-201ENST00000460601 PPP1R42Q7Z4L9 355 aa21.02■□□□□ 0.96
NELFCD-201ENST00000460601 NPM2Q86SE8 214 aaKnown RBP21.02■□□□□ 0.96
NELFCD-201ENST00000460601 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
NELFCD-201ENST00000460601 LNPKQ9C0E8 428 aa21.02■□□□□ 0.96
NELFCD-201ENST00000460601 GPTP24298 496 aa21.02■□□□□ 0.96
NELFCD-201ENST00000460601 ATP8B2P98198 1209 aa21.02■□□□□ 0.96
NELFCD-201ENST00000460601 BICC1Q9H694 974 aaKnown RBP21.02■□□□□ 0.96
NELFCD-201ENST00000460601 DCTPP1Q9H773 170 aa21.02■□□□□ 0.96
NELFCD-201ENST00000460601 TCIRG1Q13488 830 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 EPHA10Q5JZY3 1008 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 ANKRD45Q5TZF3 282 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 GIGYF2Q6Y7W6 1299 aaKnown RBP21.01■□□□□ 0.95
NELFCD-201ENST00000460601 GCC1Q96CN9 775 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 COL15A1P39059 1388 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 SRGAP3O43295 1099 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 PDE4AP27815 886 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 NUCB1Q02818 461 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 EXOC6BQ9Y2D4 811 aa21.01■□□□□ 0.95
NELFCD-201ENST00000460601 CWC25Q9NXE8 425 aaPredicted RBP21■□□□□ 0.95
NELFCD-201ENST00000460601 ISCA1Q9BUE6 129 aa20.99■□□□□ 0.95
NELFCD-201ENST00000460601 HMMRO75330 724 aa20.99■□□□□ 0.95
NELFCD-201ENST00000460601 CASP7P55210 303 aa20.99■□□□□ 0.95
NELFCD-201ENST00000460601 CNTNAP4Q9C0A0 1308 aa20.99■□□□□ 0.95
NELFCD-201ENST00000460601 TAF1LQ8IZX4 1826 aa20.98■□□□□ 0.95
NELFCD-201ENST00000460601 GNPATO15228 680 aa20.98■□□□□ 0.95
NELFCD-201ENST00000460601 CHD1LQ86WJ1 897 aa20.98■□□□□ 0.95
NELFCD-201ENST00000460601 SMARCA5O60264 1052 aaPredicted RBP20.98■□□□□ 0.95
NELFCD-201ENST00000460601 CCDC191Q8NCU4 936 aa20.98■□□□□ 0.95
NELFCD-201ENST00000460601 SSH3Q8TE77 659 aa20.98■□□□□ 0.95
NELFCD-201ENST00000460601 NUP98P52948 1817 aa20.98■□□□□ 0.95
NELFCD-201ENST00000460601 CAMTA2O94983 1202 aa20.97■□□□□ 0.95
NELFCD-201ENST00000460601 SYNE4Q8N205 404 aa20.97■□□□□ 0.95
NELFCD-201ENST00000460601 UBN2Q6ZU65 1347 aa20.96■□□□□ 0.95
NELFCD-201ENST00000460601 IBTKQ9P2D0 1353 aaPredicted RBP20.96■□□□□ 0.95
NELFCD-201ENST00000460601 H7C1W4 665 aa20.96■□□□□ 0.95
NELFCD-201ENST00000460601 POLA2Q14181 598 aa20.96■□□□□ 0.95
NELFCD-201ENST00000460601 FAM89AQ96GI7 184 aa20.96■□□□□ 0.95
NELFCD-201ENST00000460601 ERVV-1B6SEH8 477 aa20.95■□□□□ 0.94
NELFCD-201ENST00000460601 PROM2Q8N271 834 aa20.95■□□□□ 0.94
NELFCD-201ENST00000460601 C4BP0C0L5 1744 aa20.95■□□□□ 0.94
NELFCD-201ENST00000460601 MTX1Q13505 466 aa20.95■□□□□ 0.94
NELFCD-201ENST00000460601 NLRP10Q86W26 655 aa20.95■□□□□ 0.94
NELFCD-201ENST00000460601 PA2G4Q9UQ80 394 aaKnown RBP20.95■□□□□ 0.94
NELFCD-201ENST00000460601 PHF14O94880 888 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms