RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 EIF4A1P60842 406 aaKnown RBP23.52■■□□□ 1.36
CNEP1R1-203ENST00000458059 POLA2Q14181 598 aa23.52■■□□□ 1.36
CNEP1R1-203ENST00000458059 RAB11FIP3O75154 756 aa23.52■■□□□ 1.36
CNEP1R1-203ENST00000458059 ADCY5O95622 1261 aa23.52■■□□□ 1.36
CNEP1R1-203ENST00000458059 CCDC8Q9H0W5 538 aaPredicted RBP23.52■■□□□ 1.36
CNEP1R1-203ENST00000458059 BTBD11A6QL63 1104 aa23.52■■□□□ 1.36
CNEP1R1-203ENST00000458059 HTATSF1O43719 755 aaKnown RBP23.52■■□□□ 1.36
CNEP1R1-203ENST00000458059 TTC14Q96N46 770 aa23.52■■□□□ 1.36
CNEP1R1-203ENST00000458059 PLEKHG1Q9ULL1 1385 aa23.51■■□□□ 1.35
CNEP1R1-203ENST00000458059 FMN2Q9NZ56 1722 aa23.51■■□□□ 1.35
CNEP1R1-203ENST00000458059 MAP3K2Q9Y2U5 619 aa23.51■■□□□ 1.35
CNEP1R1-203ENST00000458059 XRN1Q8IZH2 1706 aaKnown RBP23.51■■□□□ 1.35
CNEP1R1-203ENST00000458059 ZNF530Q6P9A1 599 aaPredicted RBP23.51■■□□□ 1.35
CNEP1R1-203ENST00000458059 AACSQ86V21 672 aa23.51■■□□□ 1.35
CNEP1R1-203ENST00000458059 KLHDC4Q8TBB5 520 aa23.51■■□□□ 1.35
CNEP1R1-203ENST00000458059 PHF14O94880 888 aa23.5■■□□□ 1.35
CNEP1R1-203ENST00000458059 F13A1P00488 732 aa23.5■■□□□ 1.35
CNEP1R1-203ENST00000458059 CLASRPQ8N2M8 674 aaKnown RBP23.5■■□□□ 1.35
CNEP1R1-203ENST00000458059 FAM227BQ96M60 508 aa23.5■■□□□ 1.35
CNEP1R1-203ENST00000458059 PDRG1Q9NUG6 133 aa23.5■■□□□ 1.35
CNEP1R1-203ENST00000458059 NALCNQ8IZF0 1738 aa23.5■■□□□ 1.35
CNEP1R1-203ENST00000458059 IFIT2P09913 472 aaKnown RBP23.5■■□□□ 1.35
CNEP1R1-203ENST00000458059 FAM208AQ9UK61 1670 aaKnown RBP23.49■■□□□ 1.35
CNEP1R1-203ENST00000458059 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.49■■□□□ 1.35
CNEP1R1-203ENST00000458059 SPC24Q8NBT2 197 aa23.49■■□□□ 1.35
CNEP1R1-203ENST00000458059 UBR1Q8IWV7 1749 aa23.49■■□□□ 1.35
CNEP1R1-203ENST00000458059 CCDC183Q5T5S1 534 aa23.49■■□□□ 1.35
CNEP1R1-203ENST00000458059 PDCL3Q9H2J4 239 aa23.49■■□□□ 1.35
CNEP1R1-203ENST00000458059 CCDC9Q9Y3X0 531 aaKnown RBP23.49■■□□□ 1.35
CNEP1R1-203ENST00000458059 KIAA2012Q0VF49 1180 aa23.49■■□□□ 1.35
CNEP1R1-203ENST00000458059 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
CNEP1R1-203ENST00000458059 STK3Q13188 491 aa23.48■■□□□ 1.35
CNEP1R1-203ENST00000458059 CAMK4Q16566 473 aa23.48■■□□□ 1.35
CNEP1R1-203ENST00000458059 HYPKQ9NX55 129 aa23.48■■□□□ 1.35
CNEP1R1-203ENST00000458059 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.48■■□□□ 1.35
CNEP1R1-203ENST00000458059 BOLA2Q9H3K6 86 aa23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 TLR7Q9NYK1 1049 aaKnown RBP23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 TAF6LQ9Y6J9 622 aa23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 PIK3C2AO00443 1686 aa23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 TUBGCP6Q96RT7 1819 aa23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 GLRX3O76003 335 aaKnown RBP23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 NDUFB9Q9Y6M9 179 aa23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 AOX1Q06278 1338 aa23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 ME3Q16798 604 aa23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 EDC3Q96F86 508 aaKnown RBP23.46■■□□□ 1.35
CNEP1R1-203ENST00000458059 PIP4K2AP48426 406 aaPredicted RBP23.45■■□□□ 1.34
CNEP1R1-203ENST00000458059 ECHDC1Q9NTX5 307 aa23.45■■□□□ 1.34
CNEP1R1-203ENST00000458059 ADCY9O60503 1353 aa23.45■■□□□ 1.34
CNEP1R1-203ENST00000458059 UBE2HP62256 183 aa23.44■■□□□ 1.34
CNEP1R1-203ENST00000458059 CSPP1Q1MSJ5 1256 aa23.44■■□□□ 1.34
CNEP1R1-203ENST00000458059 CYP46A1Q9Y6A2 500 aa23.44■■□□□ 1.34
CNEP1R1-203ENST00000458059 MTMR6Q9Y217 621 aa23.44■■□□□ 1.34
CNEP1R1-203ENST00000458059 ST3GAL1Q11201 340 aa23.43■■□□□ 1.34
CNEP1R1-203ENST00000458059 RBM8AQ9Y5S9 174 aaKnown RBP23.43■■□□□ 1.34
CNEP1R1-203ENST00000458059 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
CNEP1R1-203ENST00000458059 NMIQ13287 307 aaPredicted RBP23.43■■□□□ 1.34
CNEP1R1-203ENST00000458059 TFIP11Q9UBB9 837 aaKnown RBP23.43■■□□□ 1.34
CNEP1R1-203ENST00000458059 AP5Z1O43299 807 aa23.42■■□□□ 1.34
CNEP1R1-203ENST00000458059 CHGBP05060 677 aa23.42■■□□□ 1.34
CNEP1R1-203ENST00000458059 ESCO1Q5FWF5 840 aa23.42■■□□□ 1.34
CNEP1R1-203ENST00000458059 TPCN1Q9ULQ1 816 aa23.42■■□□□ 1.34
CNEP1R1-203ENST00000458059 PPFIA3O75145 1194 aa23.41■■□□□ 1.34
CNEP1R1-203ENST00000458059 FOSBP53539 338 aa23.41■■□□□ 1.34
CNEP1R1-203ENST00000458059 SASS6Q6UVJ0 657 aa23.41■■□□□ 1.34
CNEP1R1-203ENST00000458059 TBX22Q9Y458 520 aa23.41■■□□□ 1.34
CNEP1R1-203ENST00000458059 MYL6BP14649 208 aa23.41■■□□□ 1.34
CNEP1R1-203ENST00000458059 LARP1BQ659C4 914 aaKnown RBP23.41■■□□□ 1.34
CNEP1R1-203ENST00000458059 CDC37L1Q7L3B6 337 aa23.41■■□□□ 1.34
CNEP1R1-203ENST00000458059 CKAP2LQ8IYA6 745 aa23.41■■□□□ 1.34
CNEP1R1-203ENST00000458059 PSME1Q06323 249 aa23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 RUFY2Q8WXA3 655 aa23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 EAF2Q96CJ1 260 aaPredicted RBP23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 BCL11BQ9C0K0 894 aaPredicted RBP23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 PHF8Q9UPP1 1060 aa23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 NWD1Q149M9 1564 aa23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 SUCLG2Q96I99 432 aa23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 MCM5P33992 734 aa23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 HSP90AB4PQ58FF6 505 aa23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 FSD1Q9BTV5 496 aa23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 BICC1Q9H694 974 aaKnown RBP23.4■■□□□ 1.34
CNEP1R1-203ENST00000458059 A0A0D9SFI3 127 aa23.39■■□□□ 1.34
CNEP1R1-203ENST00000458059 ZKSCAN1P17029 563 aaPredicted RBP23.39■■□□□ 1.34
CNEP1R1-203ENST00000458059 SLC39A6Q13433 755 aa23.39■■□□□ 1.34
CNEP1R1-203ENST00000458059 CREB3L3Q68CJ9 461 aa23.39■■□□□ 1.34
CNEP1R1-203ENST00000458059 NOLC1Q14978 699 aaKnown RBP eCLIP23.39■■□□□ 1.33
CNEP1R1-203ENST00000458059 PKNOX2Q96KN3 472 aa23.38■■□□□ 1.33
CNEP1R1-203ENST00000458059 DBF4Q9UBU7 674 aaPredicted RBP23.38■■□□□ 1.33
CNEP1R1-203ENST00000458059 CCDC171Q6TFL3 1326 aa23.38■■□□□ 1.33
CNEP1R1-203ENST00000458059 C1orf141Q5JVX7 400 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 IP6K1Q92551 441 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 GPATCH3Q96I76 525 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 SASH1O94885 1247 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 G3BP1Q13283 466 aaKnown RBP eCLIP23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 ATP6V1DQ9Y5K8 247 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 KDM4AO75164 1064 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 LIG1P18858 919 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 TTC6Q86TZ1 520 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 FAM184AQ8NB25 1140 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 PRDM10Q9NQV6 1147 aa23.37■■□□□ 1.33
CNEP1R1-203ENST00000458059 TMEM87AQ8NBN3 555 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms