RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 MTFR1LQ9H019 292 aa15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 ZNF330Q9Y3S2 320 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 MAP3K15Q6ZN16 1313 aa15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 AFDNP55196 1824 aaKnown RBP15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 RARSP54136 660 aaKnown RBP15.09■□□□□ 0.01
TRAPPC12-212ENST00000457845 USPL1Q5W0Q7 1092 aa15.09■□□□□ 0.01
TRAPPC12-212ENST00000457845 CLEC4GQ6UXB4 293 aa15.09■□□□□ 0.01
TRAPPC12-212ENST00000457845 G2E3Q7L622 706 aa15.09■□□□□ 0.01
TRAPPC12-212ENST00000457845 NLGN1Q8N2Q7 840 aa15.09■□□□□ 0.01
TRAPPC12-212ENST00000457845 MRPL50Q8N5N7 158 aaKnown RBP15.09■□□□□ 0.01
TRAPPC12-212ENST00000457845 NRXN2Q9P2S2 1712 aa15.09■□□□□ 0.01
TRAPPC12-212ENST00000457845 MSH5O43196 834 aa15.08■□□□□ 0
TRAPPC12-212ENST00000457845 ANKRD13DQ6ZTN6 518 aa15.08■□□□□ 0
TRAPPC12-212ENST00000457845 TM4SF1P30408 202 aa15.07■□□□□ 0
TRAPPC12-212ENST00000457845 AIMP1Q12904 312 aaKnown RBP15.07■□□□□ 0
TRAPPC12-212ENST00000457845 FLIIQ13045 1269 aa15.07■□□□□ 0
TRAPPC12-212ENST00000457845 FKBP8Q14318 412 aa15.07■□□□□ 0
TRAPPC12-212ENST00000457845 HLFQ16534 295 aa15.07■□□□□ 0
TRAPPC12-212ENST00000457845 GIGYF2Q6Y7W6 1299 aaKnown RBP15.07■□□□□ 0
TRAPPC12-212ENST00000457845 KIF6Q6ZMV9 814 aa15.07■□□□□ 0
TRAPPC12-212ENST00000457845 PLBD2Q8NHP8 589 aa15.07■□□□□ 0
TRAPPC12-212ENST00000457845 SGIP1Q9BQI5 828 aa15.07■□□□□ 0
TRAPPC12-212ENST00000457845 N4BP2Q86UW6 1770 aaPredicted RBP15.06■□□□□ 0
TRAPPC12-212ENST00000457845 ZBTB7AO95365 584 aa15.06■□□□□ 0
TRAPPC12-212ENST00000457845 ATP10DQ9P241 1426 aa15.06■□□□□ 0
TRAPPC12-212ENST00000457845 LRP5O75197 1615 aa15.06■□□□□ 0
TRAPPC12-212ENST00000457845 DDX58O95786 925 aaKnown RBP15.05■□□□□ -0
TRAPPC12-212ENST00000457845 KSR2Q6VAB6 950 aa15.05■□□□□ -0
TRAPPC12-212ENST00000457845 ARXQ96QS3 562 aa15.05■□□□□ -0
TRAPPC12-212ENST00000457845 ZBTB3Q9H5J0 574 aa15.05■□□□□ -0
TRAPPC12-212ENST00000457845 ZNF652Q9Y2D9 606 aa15.05■□□□□ -0
TRAPPC12-212ENST00000457845 KIF13BQ9NQT8 1826 aa15.05■□□□□ -0
TRAPPC12-212ENST00000457845 ADCY9O60503 1353 aa15.04■□□□□ -0
TRAPPC12-212ENST00000457845 PTGER2P43116 358 aa15.04■□□□□ -0
TRAPPC12-212ENST00000457845 NFIXQ14938 502 aa15.04■□□□□ -0
TRAPPC12-212ENST00000457845 ZNF34Q8IZ26 560 aa15.04■□□□□ -0
TRAPPC12-212ENST00000457845 SPON1Q9HCB6 807 aa15.04■□□□□ -0
TRAPPC12-212ENST00000457845 SMC4Q9NTJ3 1288 aa15.04■□□□□ -0
TRAPPC12-212ENST00000457845 PTPRCP08575 1304 aa15.03■□□□□ -0
TRAPPC12-212ENST00000457845 PI4KAP2A4QPH2 592 aa15.03■□□□□ -0
TRAPPC12-212ENST00000457845 TCIRG1Q13488 830 aa15.03■□□□□ -0
TRAPPC12-212ENST00000457845 HSP90AB3PQ58FF7 597 aa15.03■□□□□ -0
TRAPPC12-212ENST00000457845 TBC1D9BQ66K14 1250 aa15.03■□□□□ -0
TRAPPC12-212ENST00000457845 MSL1Q68DK7 614 aa15.03■□□□□ -0
TRAPPC12-212ENST00000457845 PI4KAP1Q8N8J0 262 aa15.03■□□□□ -0
TRAPPC12-212ENST00000457845 BCL2L13Q9BXK5 485 aa15.03■□□□□ -0
TRAPPC12-212ENST00000457845 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
TRAPPC12-212ENST00000457845 BCAR3O75815 825 aa15.02■□□□□ -0
TRAPPC12-212ENST00000457845 TRIM28Q13263 835 aaKnown RBP15.02■□□□□ -0
TRAPPC12-212ENST00000457845 FKBP5Q13451 457 aaPredicted RBP15.02■□□□□ -0
TRAPPC12-212ENST00000457845 RIC3Q7Z5B4 369 aa15.02■□□□□ -0
TRAPPC12-212ENST00000457845 ARHGAP45Q92619 1136 aa15.02■□□□□ -0
TRAPPC12-212ENST00000457845 ISCA1Q9BUE6 129 aa15.02■□□□□ -0
TRAPPC12-212ENST00000457845 METTL22Q9BUU2 404 aaPredicted RBP15.02■□□□□ -0
TRAPPC12-212ENST00000457845 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
TRAPPC12-212ENST00000457845 POLRMTO00411 1230 aaKnown RBP15.01□□□□□ -0.01
TRAPPC12-212ENST00000457845 MMP10P09238 476 aa15.01□□□□□ -0.01
TRAPPC12-212ENST00000457845 DDR1Q08345 913 aa15.01□□□□□ -0.01
TRAPPC12-212ENST00000457845 MAP3K2Q9Y2U5 619 aa15.01□□□□□ -0.01
TRAPPC12-212ENST00000457845 ANKRD31Q8N7Z5 1873 aa15.01□□□□□ -0.01
TRAPPC12-212ENST00000457845 UBN2Q6ZU65 1347 aa15□□□□□ -0.01
TRAPPC12-212ENST00000457845 POLD1P28340 1107 aa15□□□□□ -0.01
TRAPPC12-212ENST00000457845 DNAAF4Q8WXU2 420 aa15□□□□□ -0.01
TRAPPC12-212ENST00000457845 SETDB2Q96T68 719 aa15□□□□□ -0.01
TRAPPC12-212ENST00000457845 RCAN3Q9UKA8 241 aa15□□□□□ -0.01
TRAPPC12-212ENST00000457845 NIP7Q9Y221 180 aaKnown RBP eCLIP15□□□□□ -0.01
TRAPPC12-212ENST00000457845 CARMIL3Q8ND23 1372 aa14.99□□□□□ -0.01
TRAPPC12-212ENST00000457845 IBTKQ9P2D0 1353 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-212ENST00000457845 PARP10Q53GL7 1025 aa14.99□□□□□ -0.01
TRAPPC12-212ENST00000457845 NOB1Q9ULX3 412 aaKnown RBP14.99□□□□□ -0.01
TRAPPC12-212ENST00000457845 PARP3Q9Y6F1 533 aa14.99□□□□□ -0.01
TRAPPC12-212ENST00000457845 PXDNLA1KZ92 1463 aa14.99□□□□□ -0.01
TRAPPC12-212ENST00000457845 F6X3S4 739 aa14.98□□□□□ -0.01
TRAPPC12-212ENST00000457845 SERPINB2P05120 415 aa14.98□□□□□ -0.01
TRAPPC12-212ENST00000457845 IGKV5-2P06315 115 aa14.98□□□□□ -0.01
TRAPPC12-212ENST00000457845 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
TRAPPC12-212ENST00000457845 NLRP10Q86W26 655 aa14.98□□□□□ -0.01
TRAPPC12-212ENST00000457845 LAMB2P55268 1798 aa14.98□□□□□ -0.01
TRAPPC12-212ENST00000457845 KIAA1551Q9HCM1 1747 aa14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 IPO8O15397 1037 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 GPTP24298 496 aa14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 BEND3Q5T5X7 828 aa14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 SUSD4Q5VX71 490 aa14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 CCDC191Q8NCU4 936 aa14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 LINS1Q8NG48 757 aa14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 MYD88Q99836 296 aa14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 MYH3P11055 1940 aa14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 DDX60Q8IY21 1712 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-212ENST00000457845 ATP5J2-PTCD1G3V325 749 aa14.96□□□□□ -0.01
TRAPPC12-212ENST00000457845 NEXNQ0ZGT2 675 aa14.96□□□□□ -0.01
TRAPPC12-212ENST00000457845 RNF123Q5XPI4 1314 aa14.95□□□□□ -0.02
TRAPPC12-212ENST00000457845 C10orf71Q711Q0 1435 aa14.95□□□□□ -0.02
TRAPPC12-212ENST00000457845 NEURL1BA8MQ27 555 aa14.95□□□□□ -0.02
TRAPPC12-212ENST00000457845 NTSR2O95665 410 aa14.95□□□□□ -0.02
TRAPPC12-212ENST00000457845 TRIM27P14373 513 aa14.95□□□□□ -0.02
TRAPPC12-212ENST00000457845 ZKSCAN2Q63HK3 967 aa14.95□□□□□ -0.02
TRAPPC12-212ENST00000457845 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
TRAPPC12-212ENST00000457845 ATF7IPQ6VMQ6 1270 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms