RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TNNT2P45379 298 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 CDCA8Q53HL2 280 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 NUDT18Q6ZVK8 323 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 RBM46Q8TBY0 533 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 RAPGEF4Q8WZA2 1011 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 TMUB1Q9BVT8 246 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 TFCP2L1Q9NZI6 479 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 PNMA3Q9UL41 463 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 KIF20BQ96Q89 1820 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 PNPLA7Q6ZV29 1317 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 ITGB4P16144 1822 aa6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 TUBGCP6Q96RT7 1819 aa6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 ST18O60284 1047 aa6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 SSTR3P32745 418 aaPredicted RBP6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 SLC27A3Q5K4L6 730 aa6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 MPRIPQ6WCQ1 1025 aa6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 SMIM5Q71RC9 77 aa6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 ARXQ96QS3 562 aa6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 CCNL1Q9UK58 526 aaPredicted RBP6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 DOT1LQ8TEK3 1739 aa6.49□□□□□ -1.37
GTF3C3-208ENST00000455546 CHD4Q14839 1912 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 NSD2O96028 1365 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 INSRP06213 1382 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 RCCD1A6NED2 376 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 TRIM6-TRIM34B2RNG4 842 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 CYP27B1O15528 508 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 EMP3P54852 163 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 POTEEQ6S8J3 1075 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 COL23A1Q86Y22 540 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 EYA1Q99502 592 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 FAM217BQ9NTX9 383 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 NSD3Q9BZ95 1437 aa6.48□□□□□ -1.37
GTF3C3-208ENST00000455546 LY75O60449 1722 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 PAPPAQ13219 1627 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 FAM205CA6NFA0 338 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 NBPF26B4DH59 902 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 HSPA5P11021 654 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 MSL1Q68DK7 614 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 CCER1Q8TC90 406 aaPredicted RBP6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 TATDN2Q93075 761 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 BEGAINQ9BUH8 593 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 PANK3Q9H999 370 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 POLKQ9UBT6 870 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 CGNL1Q0VF96 1302 aa6.47□□□□□ -1.37
GTF3C3-208ENST00000455546 RTL1A6NKG5 1358 aa6.46□□□□□ -1.37
GTF3C3-208ENST00000455546 FLT4P35916 1363 aa6.46□□□□□ -1.37
GTF3C3-208ENST00000455546 TAF1LQ8IZX4 1826 aa6.46□□□□□ -1.37
GTF3C3-208ENST00000455546 POLD1P28340 1107 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 GPR162Q16538 588 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 DMRTA1Q5VZB9 504 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 SMG6Q86US8 1419 aaKnown RBP6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 AMIGO3Q86WK7 504 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 NLGN2Q8NFZ4 835 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 SLC16A10Q8TF71 515 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 PIGBQ92521 554 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 FAM163AQ96GL9 167 aaPredicted RBP6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 DAXXQ9UER7 740 aaPredicted RBP6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 WASHC2AQ641Q2 1341 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 PCDH11XQ9BZA7 1347 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 PCDH11YQ9BZA8 1340 aa6.46□□□□□ -1.38
GTF3C3-208ENST00000455546 EIF4G2P78344 907 aaKnown RBP eCLIP6.45□□□□□ -1.38
GTF3C3-208ENST00000455546 EIF4A2Q14240 407 aaKnown RBP6.45□□□□□ -1.38
GTF3C3-208ENST00000455546 ZNF784Q8NCA9 323 aaPredicted RBP6.45□□□□□ -1.38
GTF3C3-208ENST00000455546 ZBED2Q9BTP6 218 aa6.45□□□□□ -1.38
GTF3C3-208ENST00000455546 SEPT9Q9UHD8 586 aaPredicted RBP6.45□□□□□ -1.38
GTF3C3-208ENST00000455546 ASAP1Q9ULH1 1129 aa6.45□□□□□ -1.38
GTF3C3-208ENST00000455546 QSER1Q2KHR3 1735 aa6.45□□□□□ -1.38
GTF3C3-208ENST00000455546 UTRNP46939 3433 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 DDX11L8A8MPP1 907 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 PACS2Q86VP3 889 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 KIAA1468Q9P260 1216 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 WWC3Q9ULE0 1092 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 SPG7Q9UQ90 795 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 TOGARAM1Q9Y4F4 1720 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 KIF24Q5T7B8 1368 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 PALLDQ8WX93 1383 aa6.44□□□□□ -1.38
GTF3C3-208ENST00000455546 C5P01031 1676 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 COL24A1Q17RW2 1714 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 PHKG2P15735 406 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 YBX3P16989 372 aaKnown RBP eCLIP6.43□□□□□ -1.385e-8■□□□□ 8.5
GTF3C3-208ENST00000455546 DNAJB2P25686 324 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 ATP6V1AP38606 617 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 ITPK1Q13572 414 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 IFNL2Q8IZJ0 200 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 LINC00116Q8NCU8 138 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 POLR3EQ9NVU0 708 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 CLSPNQ9HAW4 1339 aa6.43□□□□□ -1.38
GTF3C3-208ENST00000455546 PKD1L3Q7Z443 1732 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 LOC102724428A0A0B4J2F2 783 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 POTEB3A0JP26 581 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 ARHGAP33O14559 1287 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 SIK1P57059 783 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 CNGB1Q14028 1251 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 POTEBQ6S5H4 581 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 MORC1Q86VD1 984 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 AEBP1Q8IUX7 1158 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 PROCA1Q8NCQ7 364 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 SMARCC1Q92922 1105 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 PCMTD1Q96MG8 357 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms