RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 PPP1R1BQ9UD71 204 aaPredicted RBP24.83■■□□□ 1.57
NCL-205ENST00000453992 CT47B1P0C2W7 299 aaPredicted RBP24.82■■□□□ 1.56
NCL-205ENST00000453992 ZNF428Q96B54 188 aa24.82■■□□□ 1.56
NCL-205ENST00000453992 BCL2L12Q9HB09 334 aa24.82■■□□□ 1.56
NCL-205ENST00000453992 ZNF652Q9Y2D9 606 aa24.82■■□□□ 1.56
NCL-205ENST00000453992 ANKRD36CQ5JPF3 1778 aa24.82■■□□□ 1.56
NCL-205ENST00000453992 MAP3K15Q6ZN16 1313 aa24.82■■□□□ 1.56
NCL-205ENST00000453992 ERVV-1B6SEH8 477 aa24.81■■□□□ 1.56
NCL-205ENST00000453992 FKBP8Q14318 412 aa24.81■■□□□ 1.56
NCL-205ENST00000453992 CLEC4GQ6UXB4 293 aa24.81■■□□□ 1.56
NCL-205ENST00000453992 ARXQ96QS3 562 aa24.81■■□□□ 1.56
NCL-205ENST00000453992 ARFGEF2Q9Y6D5 1785 aa24.8■■□□□ 1.56
NCL-205ENST00000453992 TTLL7Q6ZT98 887 aa24.8■■□□□ 1.56
NCL-205ENST00000453992 XAGE3Q8WTP9 111 aa24.8■■□□□ 1.56
NCL-205ENST00000453992 COPS6Q7L5N1 327 aa24.79■■□□□ 1.56
NCL-205ENST00000453992 NRXN2Q9P2S2 1712 aa24.78■■□□□ 1.56
NCL-205ENST00000453992 ATP10DQ9P241 1426 aa24.78■■□□□ 1.56
NCL-205ENST00000453992 AFDNP55196 1824 aaKnown RBP24.77■■□□□ 1.56
NCL-205ENST00000453992 MMP10P09238 476 aa24.77■■□□□ 1.56
NCL-205ENST00000453992 SLC4A2P04920 1241 aa24.75■■□□□ 1.55
NCL-205ENST00000453992 TM4SF1P30408 202 aa24.75■■□□□ 1.55
NCL-205ENST00000453992 AIMP1Q12904 312 aaKnown RBP24.75■■□□□ 1.55
NCL-205ENST00000453992 ZBTB3Q9H5J0 574 aa24.75■■□□□ 1.55
NCL-205ENST00000453992 KIF13BQ9NQT8 1826 aa24.75■■□□□ 1.55
NCL-205ENST00000453992 NFIXQ14938 502 aa24.74■■□□□ 1.55
NCL-205ENST00000453992 HLFQ16534 295 aa24.74■■□□□ 1.55
NCL-205ENST00000453992 GIGYF2Q6Y7W6 1299 aaKnown RBP24.74■■□□□ 1.55
NCL-205ENST00000453992 PLBD2Q8NHP8 589 aa24.74■■□□□ 1.55
NCL-205ENST00000453992 PHAXQ9H814 394 aaKnown RBP24.74■■□□□ 1.55
NCL-205ENST00000453992 CARMIL3Q8ND23 1372 aa24.74■■□□□ 1.55
NCL-205ENST00000453992 TCERG1O14776 1098 aaKnown RBP24.73■■□□□ 1.55
NCL-205ENST00000453992 DDX58O95786 925 aaKnown RBP24.73■■□□□ 1.55
NCL-205ENST00000453992 ALDH1L2Q3SY69 923 aa24.73■■□□□ 1.55
NCL-205ENST00000453992 TBC1D9BQ66K14 1250 aa24.73■■□□□ 1.55
NCL-205ENST00000453992 PARP3Q9Y6F1 533 aa24.73■■□□□ 1.55
NCL-205ENST00000453992 POLRMTO00411 1230 aaKnown RBP24.72■■□□□ 1.55
NCL-205ENST00000453992 DDR1Q08345 913 aa24.72■■□□□ 1.55
NCL-205ENST00000453992 HSP90AB3PQ58FF7 597 aa24.72■■□□□ 1.55
NCL-205ENST00000453992 ANKRD13DQ6ZTN6 518 aa24.72■■□□□ 1.55
NCL-205ENST00000453992 FHDC1Q9C0D6 1143 aaPredicted RBP24.72■■□□□ 1.55
NCL-205ENST00000453992 FLIIQ13045 1269 aa24.71■■□□□ 1.55
NCL-205ENST00000453992 SETDB2Q96T68 719 aa24.71■■□□□ 1.55
NCL-205ENST00000453992 SYT17Q9BSW7 474 aa24.69■■□□□ 1.54
NCL-205ENST00000453992 NIP7Q9Y221 180 aaKnown RBP eCLIP24.69■■□□□ 1.54
NCL-205ENST00000453992 C10orf71Q711Q0 1435 aa24.69■■□□□ 1.54
NCL-205ENST00000453992 IBTKQ9P2D0 1353 aaPredicted RBP24.68■■□□□ 1.54
NCL-205ENST00000453992 BICDL1Q6ZP65 573 aa24.68■■□□□ 1.54
NCL-205ENST00000453992 G2E3Q7L622 706 aa24.68■■□□□ 1.54
NCL-205ENST00000453992 SSH1Q8WYL5 1049 aa24.68■■□□□ 1.54
NCL-205ENST00000453992 KSR2Q6VAB6 950 aa24.67■■□□□ 1.54
NCL-205ENST00000453992 RIC3Q7Z5B4 369 aa24.67■■□□□ 1.54
NCL-205ENST00000453992 ZNF34Q8IZ26 560 aa24.67■■□□□ 1.54
NCL-205ENST00000453992 MRPL50Q8N5N7 158 aaKnown RBP24.67■■□□□ 1.54
NCL-205ENST00000453992 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
NCL-205ENST00000453992 ADCY9O60503 1353 aa24.67■■□□□ 1.54
NCL-205ENST00000453992 SERPINB2P05120 415 aa24.66■■□□□ 1.54
NCL-205ENST00000453992 TCIRG1Q13488 830 aa24.66■■□□□ 1.54
NCL-205ENST00000453992 PARP10Q53GL7 1025 aa24.66■■□□□ 1.54
NCL-205ENST00000453992 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
NCL-205ENST00000453992 SMC4Q9NTJ3 1288 aa24.65■■□□□ 1.54
NCL-205ENST00000453992 UBN2Q6ZU65 1347 aa24.64■■□□□ 1.54
NCL-205ENST00000453992 PI4KAP2A4QPH2 592 aa24.64■■□□□ 1.54
NCL-205ENST00000453992 RARSP54136 660 aaKnown RBP24.64■■□□□ 1.54
NCL-205ENST00000453992 BRPF1P55201 1214 aaPredicted RBP24.64■■□□□ 1.54
NCL-205ENST00000453992 PI4KAP1Q8N8J0 262 aa24.64■■□□□ 1.54
NCL-205ENST00000453992 CD2APQ9Y5K6 639 aa24.64■■□□□ 1.54
NCL-205ENST00000453992 PTPRCP08575 1304 aa24.63■■□□□ 1.53
NCL-205ENST00000453992 GPTP24298 496 aa24.63■■□□□ 1.53
NCL-205ENST00000453992 METTL22Q9BUU2 404 aaPredicted RBP24.63■■□□□ 1.53
NCL-205ENST00000453992 MAP3K2Q9Y2U5 619 aa24.63■■□□□ 1.53
NCL-205ENST00000453992 ANKRD31Q8N7Z5 1873 aa24.63■■□□□ 1.53
NCL-205ENST00000453992 KIAA1551Q9HCM1 1747 aa24.63■■□□□ 1.53
NCL-205ENST00000453992 TRIM28Q13263 835 aaKnown RBP24.62■■□□□ 1.53
NCL-205ENST00000453992 NBPF5PQ86XG9 351 aaPredicted RBP24.62■■□□□ 1.53
NCL-205ENST00000453992 CNBD1Q8NA66 436 aa24.62■■□□□ 1.53
NCL-205ENST00000453992 ISCA1Q9BUE6 129 aa24.62■■□□□ 1.53
NCL-205ENST00000453992 BCL2L13Q9BXK5 485 aa24.62■■□□□ 1.53
NCL-205ENST00000453992 NYXQ9GZU5 481 aa24.62■■□□□ 1.53
NCL-205ENST00000453992 N4BP2Q86UW6 1770 aaPredicted RBP24.62■■□□□ 1.53
NCL-205ENST00000453992 RNF123Q5XPI4 1314 aa24.61■■□□□ 1.53
NCL-205ENST00000453992 KLHL34Q8N239 644 aa24.61■■□□□ 1.53
NCL-205ENST00000453992 KIF16BQ96L93 1317 aa24.61■■□□□ 1.53
NCL-205ENST00000453992 PRR5LQ6MZQ0 368 aa24.6■■□□□ 1.53
NCL-205ENST00000453992 TPTE2Q6XPS3 522 aa24.6■■□□□ 1.53
NCL-205ENST00000453992 PPP1R42Q7Z4L9 355 aa24.6■■□□□ 1.53
NCL-205ENST00000453992 NLRP10Q86W26 655 aa24.6■■□□□ 1.53
NCL-205ENST00000453992 DNAAF4Q8WXU2 420 aa24.6■■□□□ 1.53
NCL-205ENST00000453992 RIC1Q4ADV7 1423 aa24.6■■□□□ 1.53
NCL-205ENST00000453992 DLEC1Q9Y238 1755 aa24.59■■□□□ 1.53
NCL-205ENST00000453992 ST5P78524 1137 aa24.59■■□□□ 1.53
NCL-205ENST00000453992 NEXNQ0ZGT2 675 aa24.59■■□□□ 1.53
NCL-205ENST00000453992 MYD88Q99836 296 aa24.59■■□□□ 1.53
NCL-205ENST00000453992 PXDNLA1KZ92 1463 aa24.58■■□□□ 1.53
NCL-205ENST00000453992 LAMB2P55268 1798 aa24.58■■□□□ 1.53
NCL-205ENST00000453992 NPHP1O15259 732 aa24.58■■□□□ 1.53
NCL-205ENST00000453992 NTSR2O95665 410 aa24.58■■□□□ 1.53
NCL-205ENST00000453992 SUSD4Q5VX71 490 aa24.58■■□□□ 1.53
NCL-205ENST00000453992 CCDC191Q8NCU4 936 aa24.57■■□□□ 1.52
NCL-205ENST00000453992 NLGN2Q8NFZ4 835 aa24.57■■□□□ 1.52
NCL-205ENST00000453992 UTP14AQ9BVJ6 771 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms