RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 ECHDC1Q9NTX5 307 aa25.7■■□□□ 1.7
PUF60-203ENST00000453551 OS9Q13438 667 aaPredicted RBP25.69■■□□□ 1.7
PUF60-203ENST00000453551 MEGF6O75095 1541 aa25.68■■□□□ 1.7
PUF60-203ENST00000453551 LARP1Q6PKG0 1096 aaKnown RBP25.68■■□□□ 1.7
PUF60-203ENST00000453551 RUFY2Q8WXA3 655 aa25.68■■□□□ 1.7
PUF60-203ENST00000453551 TNS3Q68CZ2 1445 aa25.68■■□□□ 1.7
PUF60-203ENST00000453551 PRAMEF22A3QJZ6 481 aa25.67■■□□□ 1.7
PUF60-203ENST00000453551 ATF3P18847 181 aa25.67■■□□□ 1.7
PUF60-203ENST00000453551 TMEM94Q12767 1356 aa25.67■■□□□ 1.7
PUF60-203ENST00000453551 PARP4Q9UKK3 1724 aaKnown RBP25.66■■□□□ 1.7
PUF60-203ENST00000453551 CWF19L2Q2TBE0 894 aaKnown RBP25.66■■□□□ 1.7
PUF60-203ENST00000453551 KAZALD1Q96I82 304 aa25.66■■□□□ 1.7
PUF60-203ENST00000453551 SUCLG2Q96I99 432 aa25.66■■□□□ 1.7
PUF60-203ENST00000453551 COL15A1P39059 1388 aa25.66■■□□□ 1.7
PUF60-203ENST00000453551 CPDO75976 1380 aa25.65■■□□□ 1.7
PUF60-203ENST00000453551 ZC3H6P61129 1189 aaKnown RBP25.65■■□□□ 1.7
PUF60-203ENST00000453551 IFNL2Q8IZJ0 200 aa25.65■■□□□ 1.7
PUF60-203ENST00000453551 KCNB2Q92953 911 aa25.65■■□□□ 1.7
PUF60-203ENST00000453551 SNX14Q9Y5W7 946 aa25.65■■□□□ 1.7
PUF60-203ENST00000453551 KIAA1211Q6ZU35 1233 aa25.65■■□□□ 1.7
PUF60-203ENST00000453551 TTC14Q96N46 770 aa25.65■■□□□ 1.7
PUF60-203ENST00000453551 ARXQ96QS3 562 aa25.65■■□□□ 1.7
PUF60-203ENST00000453551 STRCP1A6NGW2 1772 aa25.64■■□□□ 1.7
PUF60-203ENST00000453551 EVI5LQ96CN4 794 aa25.64■■□□□ 1.7
PUF60-203ENST00000453551 NLRP2Q9NX02 1062 aa25.64■■□□□ 1.7
PUF60-203ENST00000453551 IFIT2P09913 472 aaKnown RBP25.63■■□□□ 1.69
PUF60-203ENST00000453551 MAP4K4O95819 1239 aaPredicted RBP25.63■■□□□ 1.69
PUF60-203ENST00000453551 IGKV5-2P06315 115 aa25.63■■□□□ 1.69
PUF60-203ENST00000453551 DCAF5Q96JK2 942 aa25.63■■□□□ 1.69
PUF60-203ENST00000453551 SNRKQ9NRH2 765 aa25.63■■□□□ 1.69
PUF60-203ENST00000453551 HIP1O00291 1037 aa25.62■■□□□ 1.69
PUF60-203ENST00000453551 METTL22Q9BUU2 404 aaPredicted RBP25.62■■□□□ 1.69
PUF60-203ENST00000453551 RRAGDQ9NQL2 400 aaPredicted RBP25.62■■□□□ 1.69
PUF60-203ENST00000453551 DIAPH3Q9NSV4 1193 aa25.62■■□□□ 1.69
PUF60-203ENST00000453551 NEURL1BA8MQ27 555 aa25.61■■□□□ 1.69
PUF60-203ENST00000453551 MBD3O95983 291 aa25.61■■□□□ 1.69
PUF60-203ENST00000453551 NEXNQ0ZGT2 675 aa25.61■■□□□ 1.69
PUF60-203ENST00000453551 LRP10Q7Z4F1 713 aa25.61■■□□□ 1.69
PUF60-203ENST00000453551 UPF3BQ9BZI7 483 aaKnown RBP25.61■■□□□ 1.69
PUF60-203ENST00000453551 BICC1Q9H694 974 aaKnown RBP25.61■■□□□ 1.69
PUF60-203ENST00000453551 RIC3Q7Z5B4 369 aa25.6■■□□□ 1.69
PUF60-203ENST00000453551 PA2G4Q9UQ80 394 aaKnown RBP25.6■■□□□ 1.69
PUF60-203ENST00000453551 LAMB4A4D0S4 1761 aa25.6■■□□□ 1.69
PUF60-203ENST00000453551 SASH1O94885 1247 aa25.6■■□□□ 1.69
PUF60-203ENST00000453551 G3BP1Q13283 466 aaKnown RBP eCLIP25.6■■□□□ 1.691e-6■■■□□ 15.3
PUF60-203ENST00000453551 CADPS2Q86UW7 1296 aa25.6■■□□□ 1.69
PUF60-203ENST00000453551 TM6SF1Q9BZW5 370 aa25.6■■□□□ 1.69
PUF60-203ENST00000453551 GLI3P10071 1580 aa25.59■■□□□ 1.69
PUF60-203ENST00000453551 PRPF40AO75400 957 aaKnown RBP25.59■■□□□ 1.69
PUF60-203ENST00000453551 SNRPA1P09661 255 aaKnown RBP25.59■■□□□ 1.69
PUF60-203ENST00000453551 ZSCAN23Q3MJ62 389 aa25.59■■□□□ 1.69
PUF60-203ENST00000453551 GCKRQ14397 625 aa25.58■■□□□ 1.69
PUF60-203ENST00000453551 AACSQ86V21 672 aa25.58■■□□□ 1.69
PUF60-203ENST00000453551 GPT2Q8TD30 523 aa25.58■■□□□ 1.69
PUF60-203ENST00000453551 PPP1R9BQ96SB3 815 aa25.58■■□□□ 1.69
PUF60-203ENST00000453551 WDR33Q9C0J8 1336 aaKnown RBP25.58■■□□□ 1.69
PUF60-203ENST00000453551 SLC39A6Q13433 755 aa25.58■■□□□ 1.68
PUF60-203ENST00000453551 CWC27Q6UX04 472 aaKnown RBP25.58■■□□□ 1.68
PUF60-203ENST00000453551 NFATC2IPQ8NCF5 419 aa25.58■■□□□ 1.68
PUF60-203ENST00000453551 XAGE3Q8WTP9 111 aa25.58■■□□□ 1.68
PUF60-203ENST00000453551 SPATA31A3Q5VYP0 1347 aa25.57■■□□□ 1.68
PUF60-203ENST00000453551 CCDC173Q0VFZ6 552 aa25.57■■□□□ 1.68
PUF60-203ENST00000453551 CAVIN1Q6NZI2 390 aaKnown RBP25.57■■□□□ 1.68
PUF60-203ENST00000453551 RASEFQ8IZ41 740 aa25.56■■□□□ 1.68
PUF60-203ENST00000453551 ZNF496Q96IT1 587 aaPredicted RBP25.56■■□□□ 1.68
PUF60-203ENST00000453551 AIMP1Q12904 312 aaKnown RBP25.56■■□□□ 1.68
PUF60-203ENST00000453551 FMNL2Q96PY5 1086 aa25.56■■□□□ 1.68
PUF60-203ENST00000453551 LIMCH1Q9UPQ0 1083 aa25.56■■□□□ 1.68
PUF60-203ENST00000453551 ERBB4Q15303 1308 aa25.55■■□□□ 1.68
PUF60-203ENST00000453551 CLCN1P35523 988 aa25.55■■□□□ 1.68
PUF60-203ENST00000453551 NASPP49321 788 aaPredicted RBP25.55■■□□□ 1.68
PUF60-203ENST00000453551 COPS6Q7L5N1 327 aa25.55■■□□□ 1.68
PUF60-203ENST00000453551 EAF2Q96CJ1 260 aaPredicted RBP25.55■■□□□ 1.68
PUF60-203ENST00000453551 CYP27B1O15528 508 aa25.54■■□□□ 1.68
PUF60-203ENST00000453551 COPRSQ9NQ92 184 aa25.54■■□□□ 1.68
PUF60-203ENST00000453551 CSB-PGBD3P0DP91 1061 aa25.53■■□□□ 1.68
PUF60-203ENST00000453551 TTC5Q8N0Z6 440 aa25.53■■□□□ 1.68
PUF60-203ENST00000453551 RPAP1Q9BWH6 1393 aaPredicted RBP25.53■■□□□ 1.68
PUF60-203ENST00000453551 AK2P54819 239 aa25.53■■□□□ 1.68
PUF60-203ENST00000453551 RABL6Q3YEC7 729 aaPredicted RBP25.53■■□□□ 1.68
PUF60-203ENST00000453551 VPS53Q5VIR6 699 aa25.53■■□□□ 1.68
PUF60-203ENST00000453551 ANKRD13DQ6ZTN6 518 aa25.53■■□□□ 1.68
PUF60-203ENST00000453551 ZSWIM6Q9HCJ5 1215 aa25.53■■□□□ 1.68
PUF60-203ENST00000453551 CCDC171Q6TFL3 1326 aa25.53■■□□□ 1.68
PUF60-203ENST00000453551 ARFGEF2Q9Y6D5 1785 aa25.52■■□□□ 1.68
PUF60-203ENST00000453551 TMEM87AQ8NBN3 555 aa25.52■■□□□ 1.68
PUF60-203ENST00000453551 MYD88Q99836 296 aa25.52■■□□□ 1.68
PUF60-203ENST00000453551 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.52■■□□□ 1.68
PUF60-203ENST00000453551 RFX7Q2KHR2 1363 aa25.52■■□□□ 1.68
PUF60-203ENST00000453551 NCLP19338 710 aaKnown RBP25.51■■□□□ 1.67
PUF60-203ENST00000453551 NECTIN1Q15223 517 aa25.51■■□□□ 1.67
PUF60-203ENST00000453551 RUFY3Q7L099 469 aa25.51■■□□□ 1.67
PUF60-203ENST00000453551 ZSCAN31Q96LW9 406 aaPredicted RBP25.51■■□□□ 1.67
PUF60-203ENST00000453551 JCADQ9P266 1359 aa25.51■■□□□ 1.67
PUF60-203ENST00000453551 PTH1RQ03431 593 aa25.51■■□□□ 1.67
PUF60-203ENST00000453551 NOL8Q76FK4 1167 aaKnown RBP25.51■■□□□ 1.67
PUF60-203ENST00000453551 MYL6BP14649 208 aa25.5■■□□□ 1.67
PUF60-203ENST00000453551 RFX5P48382 616 aaPredicted RBP25.5■■□□□ 1.67
PUF60-203ENST00000453551 SH2B1Q9NRF2 756 aaPredicted RBP25.5■■□□□ 1.67
PUF60-203ENST00000453551 ANP32BQ92688 251 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms