RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 CHPF2Q9P2E5 772 aa25.76■■□□□ 1.71
PMPCB-205ENST00000453466 CD2APQ9Y5K6 639 aa25.76■■□□□ 1.71
PMPCB-205ENST00000453466 ANXA1P04083 346 aa25.75■■□□□ 1.71
PMPCB-205ENST00000453466 PROSER3Q2NL68 480 aa25.75■■□□□ 1.71
PMPCB-205ENST00000453466 BICDL1Q6ZP65 573 aa25.75■■□□□ 1.71
PMPCB-205ENST00000453466 TSPYL6Q8N831 410 aa25.75■■□□□ 1.71
PMPCB-205ENST00000453466 ERVV-1B6SEH8 477 aa25.74■■□□□ 1.71
PMPCB-205ENST00000453466 DDR1Q08345 913 aa25.74■■□□□ 1.71
PMPCB-205ENST00000453466 TWISTNBQ3B726 338 aaPredicted RBP25.74■■□□□ 1.71
PMPCB-205ENST00000453466 CCDC30Q5VVM6 783 aa25.74■■□□□ 1.71
PMPCB-205ENST00000453466 TBC1D9BQ66K14 1250 aa25.74■■□□□ 1.71
PMPCB-205ENST00000453466 TTLL7Q6ZT98 887 aa25.74■■□□□ 1.71
PMPCB-205ENST00000453466 LRP10Q7Z4F1 713 aa25.74■■□□□ 1.71
PMPCB-205ENST00000453466 POLRMTO00411 1230 aaKnown RBP25.73■■□□□ 1.71
PMPCB-205ENST00000453466 SETDB2Q96T68 719 aa25.73■■□□□ 1.71
PMPCB-205ENST00000453466 HYPKQ9NX55 129 aa25.73■■□□□ 1.71
PMPCB-205ENST00000453466 MAP3K15Q6ZN16 1313 aa25.73■■□□□ 1.71
PMPCB-205ENST00000453466 COPS6Q7L5N1 327 aa25.72■■□□□ 1.71
PMPCB-205ENST00000453466 SERPINB2P05120 415 aa25.71■■□□□ 1.71
PMPCB-205ENST00000453466 EXOSC9Q06265 439 aaKnown RBP25.71■■□□□ 1.71
PMPCB-205ENST00000453466 AIMP1Q12904 312 aaKnown RBP25.71■■□□□ 1.71
PMPCB-205ENST00000453466 XAGE3Q8WTP9 111 aa25.71■■□□□ 1.71
PMPCB-205ENST00000453466 HLFQ16534 295 aa25.7■■□□□ 1.7
PMPCB-205ENST00000453466 ZBTB3Q9H5J0 574 aa25.7■■□□□ 1.7
PMPCB-205ENST00000453466 STK31Q9BXU1 1019 aa25.68■■□□□ 1.7
PMPCB-205ENST00000453466 NIP7Q9Y221 180 aaKnown RBP eCLIP25.68■■□□□ 1.7
PMPCB-205ENST00000453466 CARMIL3Q8ND23 1372 aa25.67■■□□□ 1.7
PMPCB-205ENST00000453466 DCAF8L1A6NGE4 600 aa25.67■■□□□ 1.7
PMPCB-205ENST00000453466 GIGYF2Q6Y7W6 1299 aaKnown RBP25.67■■□□□ 1.7
PMPCB-205ENST00000453466 NLGN2Q8NFZ4 835 aa25.67■■□□□ 1.7
PMPCB-205ENST00000453466 VAMP4O75379 141 aa25.66■■□□□ 1.7
PMPCB-205ENST00000453466 SCN7AQ01118 1682 aa25.65■■□□□ 1.7
PMPCB-205ENST00000453466 NPHP1O15259 732 aa25.65■■□□□ 1.7
PMPCB-205ENST00000453466 TGFB2P61812 414 aa25.65■■□□□ 1.7
PMPCB-205ENST00000453466 SUPT16HQ9Y5B9 1047 aaKnown RBP25.65■■□□□ 1.7
PMPCB-205ENST00000453466 ANKRD13DQ6ZTN6 518 aa25.64■■□□□ 1.7
PMPCB-205ENST00000453466 NBPF5PQ86XG9 351 aaPredicted RBP25.63■■□□□ 1.69
PMPCB-205ENST00000453466 PLBD2Q8NHP8 589 aa25.63■■□□□ 1.69
PMPCB-205ENST00000453466 RCAN3Q9UKA8 241 aa25.63■■□□□ 1.69
PMPCB-205ENST00000453466 RNF123Q5XPI4 1314 aa25.63■■□□□ 1.69
PMPCB-205ENST00000453466 HSP90AB3PQ58FF7 597 aa25.63■■□□□ 1.69
PMPCB-205ENST00000453466 TPTE2Q6XPS3 522 aa25.63■■□□□ 1.69
PMPCB-205ENST00000453466 PHAXQ9H814 394 aaKnown RBP25.63■■□□□ 1.69
PMPCB-205ENST00000453466 C10orf71Q711Q0 1435 aa25.62■■□□□ 1.69
PMPCB-205ENST00000453466 TCERG1O14776 1098 aaKnown RBP25.62■■□□□ 1.69
PMPCB-205ENST00000453466 SLC4A2P04920 1241 aa25.62■■□□□ 1.69
PMPCB-205ENST00000453466 CNBD1Q8NA66 436 aa25.62■■□□□ 1.69
PMPCB-205ENST00000453466 ZNF34Q8IZ26 560 aa25.61■■□□□ 1.69
PMPCB-205ENST00000453466 BCORQ6W2J9 1755 aa25.61■■□□□ 1.69
PMPCB-205ENST00000453466 PRR5LQ6MZQ0 368 aa25.6■■□□□ 1.69
PMPCB-205ENST00000453466 DDX58O95786 925 aaKnown RBP25.59■■□□□ 1.69
PMPCB-205ENST00000453466 GPTP24298 496 aa25.59■■□□□ 1.69
PMPCB-205ENST00000453466 ST5P78524 1137 aa25.59■■□□□ 1.69
PMPCB-205ENST00000453466 RIC3Q7Z5B4 369 aa25.59■■□□□ 1.69
PMPCB-205ENST00000453466 GTF3C3Q9Y5Q9 886 aa25.59■■□□□ 1.69
PMPCB-205ENST00000453466 ATP10DQ9P241 1426 aa25.59■■□□□ 1.69
PMPCB-205ENST00000453466 A0A0G2JLW4 131 aa25.58■■□□□ 1.69
PMPCB-205ENST00000453466 FAM177BA6PVY3 158 aa25.58■■□□□ 1.69
PMPCB-205ENST00000453466 GTF2E1P29083 439 aaPredicted RBP25.58■■□□□ 1.69
PMPCB-205ENST00000453466 TCIRG1Q13488 830 aa25.58■■□□□ 1.69
PMPCB-205ENST00000453466 PARP10Q53GL7 1025 aa25.58■■□□□ 1.69
PMPCB-205ENST00000453466 NYXQ9GZU5 481 aa25.58■■□□□ 1.69
PMPCB-205ENST00000453466 CT47B1P0C2W7 299 aaPredicted RBP25.58■■□□□ 1.68
PMPCB-205ENST00000453466 BRIP1Q9BX63 1249 aa25.58■■□□□ 1.68
PMPCB-205ENST00000453466 DPEP1P16444 411 aa25.57■■□□□ 1.68
PMPCB-205ENST00000453466 GPR162Q16538 588 aa25.57■■□□□ 1.68
PMPCB-205ENST00000453466 PPP1R42Q7Z4L9 355 aa25.56■■□□□ 1.68
PMPCB-205ENST00000453466 PELP1Q8IZL8 1130 aaKnown RBP25.56■■□□□ 1.68
PMPCB-205ENST00000453466 PDE6BP35913 854 aa25.55■■□□□ 1.68
PMPCB-205ENST00000453466 CCDC24Q8N4L8 307 aa25.55■■□□□ 1.68
PMPCB-205ENST00000453466 PDZRN3Q9UPQ7 1066 aa25.55■■□□□ 1.68
PMPCB-205ENST00000453466 UBN2Q6ZU65 1347 aa25.54■■□□□ 1.68
PMPCB-205ENST00000453466 SUSD4Q5VX71 490 aa25.54■■□□□ 1.68
PMPCB-205ENST00000453466 ZNF428Q96B54 188 aa25.53■■□□□ 1.68
PMPCB-205ENST00000453466 PXDNLA1KZ92 1463 aa25.53■■□□□ 1.68
PMPCB-205ENST00000453466 H0YIN7 160 aa25.53■■□□□ 1.68
PMPCB-205ENST00000453466 NEFLP07196 543 aa25.53■■□□□ 1.68
PMPCB-205ENST00000453466 KSR2Q6VAB6 950 aa25.53■■□□□ 1.68
PMPCB-205ENST00000453466 G2E3Q7L622 706 aa25.53■■□□□ 1.68
PMPCB-205ENST00000453466 UTP14AQ9BVJ6 771 aaKnown RBP25.53■■□□□ 1.68
PMPCB-205ENST00000453466 NRXN2Q9P2S2 1712 aa25.52■■□□□ 1.68
PMPCB-205ENST00000453466 CHRNA5P30532 468 aa25.52■■□□□ 1.68
PMPCB-205ENST00000453466 FLIIQ13045 1269 aa25.52■■□□□ 1.68
PMPCB-205ENST00000453466 NLRP10Q86W26 655 aa25.52■■□□□ 1.68
PMPCB-205ENST00000453466 C2CD5Q86YS7 1000 aa25.52■■□□□ 1.68
PMPCB-205ENST00000453466 PIM2Q9P1W9 311 aa25.52■■□□□ 1.68
PMPCB-205ENST00000453466 NUP98P52948 1817 aa25.51■■□□□ 1.67
PMPCB-205ENST00000453466 PI4KAP2A4QPH2 592 aa25.51■■□□□ 1.67
PMPCB-205ENST00000453466 KCNA3P22001 575 aa25.51■■□□□ 1.67
PMPCB-205ENST00000453466 PI4KAP1Q8N8J0 262 aa25.51■■□□□ 1.67
PMPCB-205ENST00000453466 AFDNP55196 1824 aaKnown RBP25.51■■□□□ 1.67
PMPCB-205ENST00000453466 IBTKQ9P2D0 1353 aaPredicted RBP25.51■■□□□ 1.67
PMPCB-205ENST00000453466 KIF13BQ9NQT8 1826 aa25.5■■□□□ 1.67
PMPCB-205ENST00000453466 ISCA1Q9BUE6 129 aa25.5■■□□□ 1.67
PMPCB-205ENST00000453466 MAP3K2Q9Y2U5 619 aa25.5■■□□□ 1.67
PMPCB-205ENST00000453466 ATP5J2-PTCD1G3V325 749 aa25.49■■□□□ 1.67
PMPCB-205ENST00000453466 NTSR2O95665 410 aa25.49■■□□□ 1.67
PMPCB-205ENST00000453466 TRIM28Q13263 835 aaKnown RBP25.49■■□□□ 1.67
PMPCB-205ENST00000453466 FKBP5Q13451 457 aaPredicted RBP25.49■■□□□ 1.67
PMPCB-205ENST00000453466 NUTM1Q86Y26 1132 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms