RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 ZPR1O75312 459 aa30.86■■■□□ 2.53
CPSF4-207ENST00000451876 ZBTB7AO95365 584 aa30.86■■■□□ 2.53
CPSF4-207ENST00000451876 BCL2L12Q9HB09 334 aa30.86■■■□□ 2.53
CPSF4-207ENST00000451876 MSL1Q68DK7 614 aa30.85■■■□□ 2.53
CPSF4-207ENST00000451876 SLC16A10Q8TF71 515 aa30.84■■■□□ 2.53
CPSF4-207ENST00000451876 ZBTB3Q9H5J0 574 aa30.84■■■□□ 2.53
CPSF4-207ENST00000451876 KIF6Q6ZMV9 814 aa30.84■■■□□ 2.53
CPSF4-207ENST00000451876 MAP3K15Q6ZN16 1313 aa30.83■■■□□ 2.53
CPSF4-207ENST00000451876 ANKRD36CQ5JPF3 1778 aa30.83■■■□□ 2.53
CPSF4-207ENST00000451876 RARSP54136 660 aaKnown RBP30.83■■■□□ 2.53
CPSF4-207ENST00000451876 ALDH1L2Q3SY69 923 aa30.83■■■□□ 2.53
CPSF4-207ENST00000451876 FKBP8Q14318 412 aa30.82■■■□□ 2.52
CPSF4-207ENST00000451876 HLFQ16534 295 aa30.82■■■□□ 2.52
CPSF4-207ENST00000451876 MRPL50Q8N5N7 158 aaKnown RBP30.82■■■□□ 2.52
CPSF4-207ENST00000451876 SRCAPQ6ZRS2 3230 aa30.82■■■□□ 2.52
CPSF4-207ENST00000451876 FLIIQ13045 1269 aa30.81■■■□□ 2.52
CPSF4-207ENST00000451876 SMC4Q9NTJ3 1288 aa30.81■■■□□ 2.52
CPSF4-207ENST00000451876 MTFR1LQ9H019 292 aa30.8■■■□□ 2.52
CPSF4-207ENST00000451876 ATF5Q9Y2D1 282 aaPredicted RBP30.8■■■□□ 2.52
CPSF4-207ENST00000451876 ERVV-1B6SEH8 477 aa30.78■■■□□ 2.52
CPSF4-207ENST00000451876 ANKRD13DQ6ZTN6 518 aa30.78■■■□□ 2.52
CPSF4-207ENST00000451876 PLBD2Q8NHP8 589 aa30.77■■■□□ 2.52
CPSF4-207ENST00000451876 ADCY9O60503 1353 aa30.76■■■□□ 2.51
CPSF4-207ENST00000451876 BCAR3O75815 825 aa30.76■■■□□ 2.51
CPSF4-207ENST00000451876 TBC1D9BQ66K14 1250 aa30.76■■■□□ 2.51
CPSF4-207ENST00000451876 NLGN1Q8N2Q7 840 aa30.76■■■□□ 2.51
CPSF4-207ENST00000451876 FKBP5Q13451 457 aaPredicted RBP30.75■■■□□ 2.51
CPSF4-207ENST00000451876 CLEC4GQ6UXB4 293 aa30.75■■■□□ 2.51
CPSF4-207ENST00000451876 GIGYF2Q6Y7W6 1299 aaKnown RBP30.75■■■□□ 2.51
CPSF4-207ENST00000451876 ZNF652Q9Y2D9 606 aa30.75■■■□□ 2.51
CPSF4-207ENST00000451876 AFDNP55196 1824 aaKnown RBP30.74■■■□□ 2.51
CPSF4-207ENST00000451876 ATP10DQ9P241 1426 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 PI4KAP2A4QPH2 592 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 RGL2O15211 777 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 NFIXQ14938 502 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 BICDL1Q6ZP65 573 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 PI4KAP1Q8N8J0 262 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 DDX58O95786 925 aaKnown RBP30.73■■■□□ 2.51
CPSF4-207ENST00000451876 RIC3Q7Z5B4 369 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 SGIP1Q9BQI5 828 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 MMP10P09238 476 aa30.72■■■□□ 2.51
CPSF4-207ENST00000451876 PTGER2P43116 358 aa30.72■■■□□ 2.51
CPSF4-207ENST00000451876 BRPF1P55201 1214 aaPredicted RBP30.72■■■□□ 2.51
CPSF4-207ENST00000451876 KSR2Q6VAB6 950 aa30.72■■■□□ 2.51
CPSF4-207ENST00000451876 MAP3K2Q9Y2U5 619 aa30.72■■■□□ 2.51
CPSF4-207ENST00000451876 TM4SF1P30408 202 aa30.71■■■□□ 2.51
CPSF4-207ENST00000451876 DDR1Q08345 913 aa30.71■■■□□ 2.51
CPSF4-207ENST00000451876 SPON1Q9HCB6 807 aa30.7■■■□□ 2.51
CPSF4-207ENST00000451876 NRXN2Q9P2S2 1712 aa30.7■■■□□ 2.5
CPSF4-207ENST00000451876 UBN2Q6ZU65 1347 aa30.69■■■□□ 2.5
CPSF4-207ENST00000451876 F6X3S4 739 aa30.69■■■□□ 2.5
CPSF4-207ENST00000451876 GPTP24298 496 aa30.69■■■□□ 2.5
CPSF4-207ENST00000451876 RCAN3Q9UKA8 241 aa30.69■■■□□ 2.5
CPSF4-207ENST00000451876 NOB1Q9ULX3 412 aaKnown RBP30.69■■■□□ 2.5
CPSF4-207ENST00000451876 NIP7Q9Y221 180 aaKnown RBP eCLIP30.69■■■□□ 2.5
CPSF4-207ENST00000451876 PTPRCP08575 1304 aa30.68■■■□□ 2.5
CPSF4-207ENST00000451876 POLRMTO00411 1230 aaKnown RBP30.67■■■□□ 2.5
CPSF4-207ENST00000451876 TCIRG1Q13488 830 aa30.67■■■□□ 2.5
CPSF4-207ENST00000451876 ZNF34Q8IZ26 560 aa30.67■■■□□ 2.5
CPSF4-207ENST00000451876 LRP5O75197 1615 aa30.67■■■□□ 2.5
CPSF4-207ENST00000451876 KIF16BQ96L93 1317 aa30.67■■■□□ 2.5
CPSF4-207ENST00000451876 CARMIL3Q8ND23 1372 aa30.66■■■□□ 2.5
CPSF4-207ENST00000451876 SETDB2Q96T68 719 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 MYD88Q99836 296 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 METTL22Q9BUU2 404 aaPredicted RBP30.65■■■□□ 2.5
CPSF4-207ENST00000451876 N4BP2Q86UW6 1770 aaPredicted RBP30.65■■■□□ 2.5
CPSF4-207ENST00000451876 ATP5J2-PTCD1G3V325 749 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 POLD1P28340 1107 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 HSP90AB3PQ58FF7 597 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 DNAAF4Q8WXU2 420 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 FRAT1Q92837 279 aaPredicted RBP30.63■■■□□ 2.49
CPSF4-207ENST00000451876 ISCA1Q9BUE6 129 aa30.63■■■□□ 2.49
CPSF4-207ENST00000451876 PARP3Q9Y6F1 533 aa30.62■■■□□ 2.49
CPSF4-207ENST00000451876 FAM177BA6PVY3 158 aa30.61■■■□□ 2.49
CPSF4-207ENST00000451876 SERPINB2P05120 415 aa30.61■■■□□ 2.49
CPSF4-207ENST00000451876 IGKV5-2P06315 115 aa30.61■■■□□ 2.49
CPSF4-207ENST00000451876 NLRP10Q86W26 655 aa30.6■■■□□ 2.49
CPSF4-207ENST00000451876 TNNQ9UQP3 1299 aa30.6■■■□□ 2.49
CPSF4-207ENST00000451876 CWF19L2Q2TBE0 894 aaKnown RBP30.59■■■□□ 2.49
CPSF4-207ENST00000451876 SUSD4Q5VX71 490 aa30.59■■■□□ 2.49
CPSF4-207ENST00000451876 PXDNLA1KZ92 1463 aa30.59■■■□□ 2.49
CPSF4-207ENST00000451876 KIF13BQ9NQT8 1826 aa30.59■■■□□ 2.49
CPSF4-207ENST00000451876 SLC4A10Q6U841 1118 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 ANKRD31Q8N7Z5 1873 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 TRIM27P14373 513 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 NEXNQ0ZGT2 675 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 ARHGAP45Q92619 1136 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 PARP10Q53GL7 1025 aa30.57■■■□□ 2.48
CPSF4-207ENST00000451876 BEND3Q5T5X7 828 aa30.57■■■□□ 2.48
CPSF4-207ENST00000451876 NBPF5PQ86XG9 351 aaPredicted RBP30.57■■■□□ 2.48
CPSF4-207ENST00000451876 NTSR2O95665 410 aa30.56■■■□□ 2.48
CPSF4-207ENST00000451876 TRIM28Q13263 835 aaKnown RBP30.56■■■□□ 2.48
CPSF4-207ENST00000451876 ATF7IPQ6VMQ6 1270 aa30.56■■■□□ 2.48
CPSF4-207ENST00000451876 API5Q9BZZ5 524 aaKnown RBP30.56■■■□□ 2.48
CPSF4-207ENST00000451876 IBTKQ9P2D0 1353 aaPredicted RBP30.56■■■□□ 2.48
CPSF4-207ENST00000451876 NEURL1BA8MQ27 555 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 PRR5LQ6MZQ0 368 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 CCDC24Q8N4L8 307 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 IPO8O15397 1037 aaKnown RBP30.55■■■□□ 2.48
CPSF4-207ENST00000451876 ZKSCAN2Q63HK3 967 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms