RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 SFSWAPQ12872 951 aaKnown RBP6.24□□□□□ -1.41
HMGB3P22-202ENST00000451823 HDGFL1Q5TGJ6 251 aa6.24□□□□□ -1.41
HMGB3P22-202ENST00000451823 C7orf43Q8WVR3 580 aa6.24□□□□□ -1.41
HMGB3P22-202ENST00000451823 PLVAPQ9BX97 442 aa6.24□□□□□ -1.41
HMGB3P22-202ENST00000451823 AVENQ9NQS1 362 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P22-202ENST00000451823 HCN4Q9Y3Q4 1203 aa6.24□□□□□ -1.41
HMGB3P22-202ENST00000451823 EIF4G1Q04637 1599 aaKnown RBP6.23□□□□□ -1.41
HMGB3P22-202ENST00000451823 RAD21O60216 631 aa6.23□□□□□ -1.41
HMGB3P22-202ENST00000451823 FAM157BP0CG42 384 aa6.23□□□□□ -1.41
HMGB3P22-202ENST00000451823 ZNF468Q5VIY5 522 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P22-202ENST00000451823 NFATC2IPQ8NCF5 419 aa6.23□□□□□ -1.41
HMGB3P22-202ENST00000451823 NOP53Q9NZM5 478 aaKnown RBP6.23□□□□□ -1.41
HMGB3P22-202ENST00000451823 SERTM1A2A2V5 107 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 POM121CA8CG34 1229 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 EML1O00423 815 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 CHRNA4P43681 627 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 LAMC2Q13753 1193 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 SH3PXD2AQ5TCZ1 1133 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 SAMD5Q5TGI4 173 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 DIEXFQ68CQ4 756 aaKnown RBP6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 SYT9Q86SS6 491 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 SLC9A9Q8IVB4 645 aa6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 TTBK1Q5TCY1 1321 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P22-202ENST00000451823 ELOA3CA0A087WX78 387 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 ELOA3DA6NLF2 546 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 USP17L5A8MUK1 530 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 EFSO43281 561 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 EPHA4P54764 986 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 DOC2BQ14184 412 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 ELOA3BQ3SY89 546 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 XP32Q5T750 250 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 CCDC102BQ68D86 513 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 ELOA3Q8NG57 546 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 TRIM11Q96F44 468 aa6.21□□□□□ -1.42
HMGB3P22-202ENST00000451823 SFI1A8K8P3 1242 aa6.2□□□□□ -1.42
HMGB3P22-202ENST00000451823 TRIM50Q86XT4 487 aa6.2□□□□□ -1.42
HMGB3P22-202ENST00000451823 TPCN2Q8NHX9 752 aa6.2□□□□□ -1.42
HMGB3P22-202ENST00000451823 SLC30A3Q99726 388 aa6.2□□□□□ -1.42
HMGB3P22-202ENST00000451823 CLDN10P78369 228 aa6.19□□□□□ -1.42
HMGB3P22-202ENST00000451823 RHPN1Q8TCX5 695 aa6.19□□□□□ -1.42
HMGB3P22-202ENST00000451823 ADAMTS19Q8TE59 1207 aa6.19□□□□□ -1.42
HMGB3P22-202ENST00000451823 TSPAN10Q9H1Z9 355 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P22-202ENST00000451823 SEMA6BQ9H3T3 888 aa6.19□□□□□ -1.42
HMGB3P22-202ENST00000451823 MKRN1Q9UHC7 482 aaKnown RBP6.19□□□□□ -1.42
HMGB3P22-202ENST00000451823 KIAA1024Q9UPX6 916 aa6.19□□□□□ -1.42
HMGB3P22-202ENST00000451823 UBTFP17480 764 aaKnown RBP6.18□□□□□ -1.42
HMGB3P22-202ENST00000451823 ATP1A2P50993 1020 aa6.18□□□□□ -1.42
HMGB3P22-202ENST00000451823 C8orf86Q6ZUL3 223 aa6.18□□□□□ -1.42
HMGB3P22-202ENST00000451823 OGFOD1Q8N543 542 aa6.18□□□□□ -1.42
HMGB3P22-202ENST00000451823 CEP63Q96MT8 703 aa6.18□□□□□ -1.42
HMGB3P22-202ENST00000451823 ANKIB1Q9P2G1 1089 aa6.18□□□□□ -1.42
HMGB3P22-202ENST00000451823 SIN3BO75182 1162 aa6.17□□□□□ -1.42
HMGB3P22-202ENST00000451823 GATA4P43694 442 aa6.17□□□□□ -1.42
HMGB3P22-202ENST00000451823 C1orf53Q5VUE5 145 aa6.17□□□□□ -1.42
HMGB3P22-202ENST00000451823 RAB44Q7Z6P3 723 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P22-202ENST00000451823 ZNF280CQ8ND82 737 aa6.17□□□□□ -1.42
HMGB3P22-202ENST00000451823 STARD13Q9Y3M8 1113 aa6.17□□□□□ -1.42
HMGB3P22-202ENST00000451823 USP17L3A6NCW0 530 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 USP17L4A6NCW7 530 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 PALM3A6NDB9 673 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 ADARB2-AS1A8MUL3 147 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 M0R082 166 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 SPEM2Q0P670 501 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 FLIIQ13045 1269 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 USP17L2Q6R6M4 530 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 USP17L1Q7RTZ2 530 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 PLEKHM2Q8IWE5 1019 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 MICALL1Q8N3F8 863 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 LARGE2Q8N3Y3 721 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 TSEN2Q8NCE0 465 aaKnown RBP6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 ZNF417Q8TAU3 575 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 CCER1Q8TC90 406 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 HSH2DQ96JZ2 352 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 SUSD3Q96L08 255 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 ZNF587Q96SQ5 575 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 PHACTR1Q9C0D0 580 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 IGFLR1Q9H665 355 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 CHMP3Q9Y3E7 222 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 ATAD2Q6PL18 1390 aa6.16□□□□□ -1.42
HMGB3P22-202ENST00000451823 FAM229AH3BQW9 127 aa6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 ATP9BO43861 1147 aa6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 SPATA31C1P0DKV0 1188 aa6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 PSMA6P60900 246 aaKnown RBP6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 COL9A3Q14050 684 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 Q8N3U1 123 aa6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 CHMP7Q8WUX9 453 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 UCN2Q96RP3 112 aa6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 MDFIQ99750 246 aa6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 BRD7Q9NPI1 651 aa6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 TFIP11Q9UBB9 837 aaKnown RBP6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 KCNH4Q9UQ05 1017 aa6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 RBM19Q9Y4C8 960 aaKnown RBP6.15□□□□□ -1.42
HMGB3P22-202ENST00000451823 SPDYE3A6NKU9 549 aa6.14□□□□□ -1.43
HMGB3P22-202ENST00000451823 C21orf2O43822 256 aa6.14□□□□□ -1.43
HMGB3P22-202ENST00000451823 PPP1R12BO60237 982 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P22-202ENST00000451823 PRRT3Q5FWE3 981 aa6.14□□□□□ -1.43
HMGB3P22-202ENST00000451823 TNFRSF25Q93038 417 aa6.14□□□□□ -1.43
HMGB3P22-202ENST00000451823 ZNF594Q96JF6 807 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P22-202ENST00000451823 GPC6Q9Y625 555 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms