RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 CAMTA2O94983 1202 aa13.81□□□□□ -0.2
DDX39B-211ENST00000449757 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
DDX39B-211ENST00000449757 PRPF40BQ6NWY9 871 aaKnown RBP13.81□□□□□ -0.2
DDX39B-211ENST00000449757 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
DDX39B-211ENST00000449757 LAMB4A4D0S4 1761 aa13.81□□□□□ -0.2
DDX39B-211ENST00000449757 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
DDX39B-211ENST00000449757 CFAP53Q96M91 514 aa13.8□□□□□ -0.2
DDX39B-211ENST00000449757 SCN4AP35499 1836 aa13.8□□□□□ -0.2
DDX39B-211ENST00000449757 CEMIPQ8WUJ3 1361 aa13.8□□□□□ -0.2
DDX39B-211ENST00000449757 POTECB2RU33 542 aa13.79□□□□□ -0.2
DDX39B-211ENST00000449757 SOGA3Q5TF21 947 aa13.79□□□□□ -0.2
DDX39B-211ENST00000449757 STYK1Q6J9G0 422 aa13.79□□□□□ -0.2
DDX39B-211ENST00000449757 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
DDX39B-211ENST00000449757 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
DDX39B-211ENST00000449757 ZNF652Q9Y2D9 606 aa13.79□□□□□ -0.2
DDX39B-211ENST00000449757 NPC1L1Q9UHC9 1359 aa13.79□□□□□ -0.2
DDX39B-211ENST00000449757 FAM177BA6PVY3 158 aa13.78□□□□□ -0.2
DDX39B-211ENST00000449757 DDNO94850 711 aaPredicted RBP13.78□□□□□ -0.2
DDX39B-211ENST00000449757 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
DDX39B-211ENST00000449757 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
DDX39B-211ENST00000449757 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
DDX39B-211ENST00000449757 LTBP3Q9NS15 1303 aa13.78□□□□□ -0.2
DDX39B-211ENST00000449757 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
DDX39B-211ENST00000449757 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
DDX39B-211ENST00000449757 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
DDX39B-211ENST00000449757 SRGNP10124 158 aa13.77□□□□□ -0.21
DDX39B-211ENST00000449757 CCDC93Q567U6 631 aa13.77□□□□□ -0.21
DDX39B-211ENST00000449757 DLG5Q8TDM6 1919 aa13.77□□□□□ -0.21
DDX39B-211ENST00000449757 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
DDX39B-211ENST00000449757 NUDCQ9Y266 331 aa13.77□□□□□ -0.21
DDX39B-211ENST00000449757 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-211ENST00000449757 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.214e-14■□□□□ 8.9
DDX39B-211ENST00000449757 MCM10Q7L590 875 aa13.76□□□□□ -0.21
DDX39B-211ENST00000449757 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
DDX39B-211ENST00000449757 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
DDX39B-211ENST00000449757 IQCA1LA6NCM1 817 aa13.75□□□□□ -0.21
DDX39B-211ENST00000449757 SNRPA1P09661 255 aaKnown RBP13.75□□□□□ -0.21
DDX39B-211ENST00000449757 EAPPQ56P03 285 aaPredicted RBP13.75□□□□□ -0.21
DDX39B-211ENST00000449757 ZNF277Q9NRM2 450 aaPredicted RBP13.75□□□□□ -0.21
DDX39B-211ENST00000449757 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX39B-211ENST00000449757 NUP98P52948 1817 aa13.75□□□□□ -0.21
DDX39B-211ENST00000449757 NPR1P16066 1061 aa13.74□□□□□ -0.21
DDX39B-211ENST00000449757 GTF2E1P29083 439 aaPredicted RBP13.74□□□□□ -0.21
DDX39B-211ENST00000449757 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
DDX39B-211ENST00000449757 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
DDX39B-211ENST00000449757 ZNF541Q9H0D2 1346 aa13.73□□□□□ -0.21
DDX39B-211ENST00000449757 FKBP4Q02790 459 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX39B-211ENST00000449757 CLEC4GQ6UXB4 293 aa13.73□□□□□ -0.21
DDX39B-211ENST00000449757 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
DDX39B-211ENST00000449757 CLEC11AQ9Y240 323 aa13.73□□□□□ -0.21
DDX39B-211ENST00000449757 OLFM4Q6UX06 510 aa13.72□□□□□ -0.21
DDX39B-211ENST00000449757 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
DDX39B-211ENST00000449757 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-211ENST00000449757 CNTNAP1P78357 1384 aa13.71□□□□□ -0.21
DDX39B-211ENST00000449757 NGEFQ8N5V2 710 aa13.71□□□□□ -0.21
DDX39B-211ENST00000449757 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
DDX39B-211ENST00000449757 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.21
DDX39B-211ENST00000449757 HACL1Q9UJ83 578 aa13.71□□□□□ -0.21
DDX39B-211ENST00000449757 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
DDX39B-211ENST00000449757 NBPF10Q6P3W6 841 aaKnown RBP13.7□□□□□ -0.22
DDX39B-211ENST00000449757 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
DDX39B-211ENST00000449757 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
DDX39B-211ENST00000449757 ADAMTSL1Q8N6G6 1762 aa13.7□□□□□ -0.22
DDX39B-211ENST00000449757 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
DDX39B-211ENST00000449757 PASKQ96RG2 1323 aa13.69□□□□□ -0.22
DDX39B-211ENST00000449757 NEFMP07197 916 aa13.69□□□□□ -0.22
DDX39B-211ENST00000449757 PPP2R1AP30153 589 aa13.69□□□□□ -0.22
DDX39B-211ENST00000449757 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
DDX39B-211ENST00000449757 HLFQ16534 295 aa13.69□□□□□ -0.22
DDX39B-211ENST00000449757 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
DDX39B-211ENST00000449757 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
DDX39B-211ENST00000449757 ABCC12Q96J65 1359 aa13.69□□□□□ -0.22
DDX39B-211ENST00000449757 TMEM88BA6NKF7 163 aa13.68□□□□□ -0.22
DDX39B-211ENST00000449757 FOXN1O15353 648 aa13.68□□□□□ -0.22
DDX39B-211ENST00000449757 ALDH1B1P30837 517 aa13.68□□□□□ -0.22
DDX39B-211ENST00000449757 EPHX2P34913 555 aa13.68□□□□□ -0.22
DDX39B-211ENST00000449757 KIF6Q6ZMV9 814 aa13.68□□□□□ -0.22
DDX39B-211ENST00000449757 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
DDX39B-211ENST00000449757 SYNE4Q8N205 404 aa13.68□□□□□ -0.22
DDX39B-211ENST00000449757 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
DDX39B-211ENST00000449757 JDP2Q8WYK2 163 aa13.67□□□□□ -0.22
DDX39B-211ENST00000449757 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
DDX39B-211ENST00000449757 NYXQ9GZU5 481 aa13.67□□□□□ -0.22
DDX39B-211ENST00000449757 GJA3Q9Y6H8 435 aa13.67□□□□□ -0.22
DDX39B-211ENST00000449757 TRPM7Q96QT4 1865 aa13.67□□□□□ -0.22
DDX39B-211ENST00000449757 KLRG2A4D1S0 409 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-211ENST00000449757 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
DDX39B-211ENST00000449757 GPTP24298 496 aa13.66□□□□□ -0.22
DDX39B-211ENST00000449757 VEGFBP49765 207 aa13.66□□□□□ -0.22
DDX39B-211ENST00000449757 MAP1SQ66K74 1059 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-211ENST00000449757 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
DDX39B-211ENST00000449757 LTBP1Q14766 1721 aa13.65□□□□□ -0.22
DDX39B-211ENST00000449757 TCERG1O14776 1098 aaKnown RBP13.65□□□□□ -0.22
DDX39B-211ENST00000449757 RGL2O15211 777 aa13.65□□□□□ -0.22
DDX39B-211ENST00000449757 MYL6BP14649 208 aa13.65□□□□□ -0.22
DDX39B-211ENST00000449757 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-211ENST00000449757 EIF6P56537 245 aaKnown RBP13.65□□□□□ -0.22
DDX39B-211ENST00000449757 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-211ENST00000449757 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-211ENST00000449757 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms