RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 TSHZ3Q63HK5 1081 aa19.82■□□□□ 0.76
AP000253.1-201ENST00000449339 HSCBQ8IWL3 235 aa19.82■□□□□ 0.76
AP000253.1-201ENST00000449339 SUCLG2Q96I99 432 aa19.82■□□□□ 0.76
AP000253.1-201ENST00000449339 KIF2CQ99661 725 aa19.82■□□□□ 0.76
AP000253.1-201ENST00000449339 SALL3Q9BXA9 1300 aa19.81■□□□□ 0.76
AP000253.1-201ENST00000449339 ARFGEF2Q9Y6D5 1785 aa19.81■□□□□ 0.76
AP000253.1-201ENST00000449339 DEKP35659 375 aaKnown RBP19.81■□□□□ 0.76
AP000253.1-201ENST00000449339 NEXNQ0ZGT2 675 aa19.81■□□□□ 0.76
AP000253.1-201ENST00000449339 CASC1Q6TDU7 716 aa19.81■□□□□ 0.76
AP000253.1-201ENST00000449339 KAZALD1Q96I82 304 aa19.8■□□□□ 0.76
AP000253.1-201ENST00000449339 IL1RAPL2Q9NP60 686 aa19.8■□□□□ 0.76
AP000253.1-201ENST00000449339 SPATA31A1Q5TZJ5 1347 aa19.8■□□□□ 0.76
AP000253.1-201ENST00000449339 JARID2Q92833 1246 aaPredicted RBP19.8■□□□□ 0.76
AP000253.1-201ENST00000449339 AFDNP55196 1824 aaKnown RBP19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 MX1P20591 662 aa19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 TTLL7Q6ZT98 887 aa19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 SNX21Q969T3 373 aa19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 ATP5J2-PTCD1G3V325 749 aa19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 FRAT2O75474 233 aaPredicted RBP19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 GCKRQ14397 625 aa19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 SPRYD3Q8NCJ5 442 aa19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 ATG3Q9NT62 314 aa19.79■□□□□ 0.76
AP000253.1-201ENST00000449339 UTYO14607 1347 aa19.78■□□□□ 0.76
AP000253.1-201ENST00000449339 SYTL4Q96C24 671 aaPredicted RBP19.78■□□□□ 0.76
AP000253.1-201ENST00000449339 BICC1Q9H694 974 aaKnown RBP19.78■□□□□ 0.76
AP000253.1-201ENST00000449339 ERBB4Q15303 1308 aa19.77■□□□□ 0.76
AP000253.1-201ENST00000449339 RAB11FIP3O75154 756 aa19.77■□□□□ 0.76
AP000253.1-201ENST00000449339 MTX1Q13505 466 aa19.77■□□□□ 0.76
AP000253.1-201ENST00000449339 PLBD2Q8NHP8 589 aa19.77■□□□□ 0.76
AP000253.1-201ENST00000449339 RBM42Q9BTD8 480 aaKnown RBP19.77■□□□□ 0.76
AP000253.1-201ENST00000449339 PA2G4Q9UQ80 394 aaKnown RBP19.77■□□□□ 0.76
AP000253.1-201ENST00000449339 DNAJC10Q8IXB1 793 aa19.76■□□□□ 0.75
AP000253.1-201ENST00000449339 CCDC9Q9Y3X0 531 aaKnown RBP19.76■□□□□ 0.75
AP000253.1-201ENST00000449339 RHPN1Q8TCX5 695 aa19.76■□□□□ 0.75
AP000253.1-201ENST00000449339 EPHA10Q5JZY3 1008 aa19.75■□□□□ 0.75
AP000253.1-201ENST00000449339 NUTM1Q86Y26 1132 aa19.75■□□□□ 0.75
AP000253.1-201ENST00000449339 USP26Q9BXU7 913 aa19.75■□□□□ 0.75
AP000253.1-201ENST00000449339 STAP2Q9UGK3 403 aa19.75■□□□□ 0.75
AP000253.1-201ENST00000449339 BCL9O00512 1426 aa19.75■□□□□ 0.75
AP000253.1-201ENST00000449339 DOT1LQ8TEK3 1739 aa19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 PRIM1P49642 420 aaKnown RBP19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 SPATA31A5Q5VU36 1347 aa19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 SPATA31A7Q8IWB4 1347 aa19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 SLIT2O94813 1529 aa19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 NUP188Q5SRE5 1749 aa19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 DDB1Q16531 1140 aa19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 ZBTB3Q9H5J0 574 aa19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 ZNF330Q9Y3S2 320 aaPredicted RBP19.74■□□□□ 0.75
AP000253.1-201ENST00000449339 OS9Q13438 667 aaPredicted RBP19.73■□□□□ 0.75
AP000253.1-201ENST00000449339 SLC4A9Q96Q91 983 aa19.73■□□□□ 0.75
AP000253.1-201ENST00000449339 HDAC5Q9UQL6 1122 aa19.73■□□□□ 0.75
AP000253.1-201ENST00000449339 LRP6O75581 1613 aa19.73■□□□□ 0.75
AP000253.1-201ENST00000449339 NWD2Q9ULI1 1742 aa19.73■□□□□ 0.75
AP000253.1-201ENST00000449339 TUBGCP6Q96RT7 1819 aa19.72■□□□□ 0.75
AP000253.1-201ENST00000449339 REC8O95072 547 aa19.72■□□□□ 0.75
AP000253.1-201ENST00000449339 UBE3BQ7Z3V4 1068 aa19.72■□□□□ 0.75
AP000253.1-201ENST00000449339 KIF1BPQ96EK5 621 aa19.72■□□□□ 0.75
AP000253.1-201ENST00000449339 THRAP3Q9Y2W1 955 aaKnown RBP19.72■□□□□ 0.75
AP000253.1-201ENST00000449339 A0A0G2JS52 829 aa19.72■□□□□ 0.75
AP000253.1-201ENST00000449339 ERC2O15083 957 aa19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 HSP90AB4PQ58FF6 505 aa19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 C8orf37Q96NL8 207 aa19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 CDCA7Q9BWT1 371 aaPredicted RBP19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 AOX1Q06278 1338 aa19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 A0A087WZG4 1122 aa19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 CD2BP2O95400 341 aaKnown RBP19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 MARCH10Q8NA82 808 aaPredicted RBP19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 ACSBG1Q96GR2 724 aa19.71■□□□□ 0.75
AP000253.1-201ENST00000449339 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.7■□□□□ 0.74
AP000253.1-201ENST00000449339 VSIG10Q8N0Z9 540 aa19.7■□□□□ 0.74
AP000253.1-201ENST00000449339 KLHDC4Q8TBB5 520 aa19.7■□□□□ 0.74
AP000253.1-201ENST00000449339 TRIM6-TRIM34B2RNG4 842 aa19.7■□□□□ 0.74
AP000253.1-201ENST00000449339 CHMP5Q9NZZ3 219 aa19.7■□□□□ 0.74
AP000253.1-201ENST00000449339 RILPL2Q969X0 211 aa19.69■□□□□ 0.74
AP000253.1-201ENST00000449339 RABEP1Q15276 862 aa19.68■□□□□ 0.74
AP000253.1-201ENST00000449339 NGLY1Q96IV0 654 aa19.68■□□□□ 0.74
AP000253.1-201ENST00000449339 SIL1Q9H173 461 aa19.68■□□□□ 0.74
AP000253.1-201ENST00000449339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.68■□□□□ 0.74
AP000253.1-201ENST00000449339 CASP7P55210 303 aa19.68■□□□□ 0.74
AP000253.1-201ENST00000449339 TEX13AQ9BXU3 409 aaPredicted RBP19.68■□□□□ 0.74
AP000253.1-201ENST00000449339 K7ELQ4 463 aaPredicted RBP19.67■□□□□ 0.74
AP000253.1-201ENST00000449339 STARD3NLO95772 234 aa19.67■□□□□ 0.74
AP000253.1-201ENST00000449339 UNC5CLQ8IV45 518 aa19.67■□□□□ 0.74
AP000253.1-201ENST00000449339 JCADQ9P266 1359 aa19.67■□□□□ 0.74
AP000253.1-201ENST00000449339 TJP1Q07157 1748 aa19.67■□□□□ 0.74
AP000253.1-201ENST00000449339 MAP4K4O95819 1239 aaPredicted RBP19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 FAM98CQ17RN3 349 aaKnown RBP19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 BARGINQ6ZT62 677 aa19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 ARXQ96QS3 562 aa19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 SASH1O94885 1247 aa19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 CYP19A1P11511 503 aaPredicted RBP19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 CHMLP26374 656 aa19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 DDIT3P35638 169 aa19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 ESYT1Q9BSJ8 1104 aa19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 CWC25Q9NXE8 425 aaPredicted RBP19.66■□□□□ 0.74
AP000253.1-201ENST00000449339 BCL9LQ86UU0 1499 aa19.65■□□□□ 0.74
AP000253.1-201ENST00000449339 H7C1W4 665 aa19.65■□□□□ 0.74
AP000253.1-201ENST00000449339 PI4K2BQ8TCG2 481 aa19.65■□□□□ 0.74
AP000253.1-201ENST00000449339 G3BP1Q13283 466 aaKnown RBP eCLIP19.64■□□□□ 0.74
AP000253.1-201ENST00000449339 HSP90AA1P07900 732 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms