RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 KIAA1551Q9HCM1 1747 aa26.6■■□□□ 1.85
CCHCR1-206ENST00000448141 SERPINB2P05120 415 aa26.6■■□□□ 1.85
CCHCR1-206ENST00000448141 CLEC4GQ6UXB4 293 aa26.6■■□□□ 1.85
CCHCR1-206ENST00000448141 DDX21Q9NR30 783 aaKnown RBP eCLIP26.6■■□□□ 1.85
CCHCR1-206ENST00000448141 N4BP2Q86UW6 1770 aaPredicted RBP26.6■■□□□ 1.85
CCHCR1-206ENST00000448141 FANCIQ9NVI1 1328 aa26.6■■□□□ 1.85
CCHCR1-206ENST00000448141 HLFQ16534 295 aa26.59■■□□□ 1.85
CCHCR1-206ENST00000448141 MAP3K15Q6ZN16 1313 aa26.59■■□□□ 1.85
CCHCR1-206ENST00000448141 CARMIL3Q8ND23 1372 aa26.58■■□□□ 1.85
CCHCR1-206ENST00000448141 TSPYL6Q8N831 410 aa26.58■■□□□ 1.85
CCHCR1-206ENST00000448141 SETDB2Q96T68 719 aa26.58■■□□□ 1.85
CCHCR1-206ENST00000448141 ZBTB3Q9H5J0 574 aa26.58■■□□□ 1.85
CCHCR1-206ENST00000448141 SPINK5Q9NQ38 1064 aaPredicted RBP26.58■■□□□ 1.85
CCHCR1-206ENST00000448141 ZNF521Q96K83 1311 aa26.58■■□□□ 1.85
CCHCR1-206ENST00000448141 DCAF8L1A6NGE4 600 aa26.57■■□□□ 1.84
CCHCR1-206ENST00000448141 ERVV-1B6SEH8 477 aa26.57■■□□□ 1.84
CCHCR1-206ENST00000448141 RGL2O15211 777 aa26.57■■□□□ 1.84
CCHCR1-206ENST00000448141 DBF4Q9UBU7 674 aaPredicted RBP26.57■■□□□ 1.84
CCHCR1-206ENST00000448141 XAGE3Q8WTP9 111 aa26.56■■□□□ 1.84
CCHCR1-206ENST00000448141 PXDNLA1KZ92 1463 aa26.55■■□□□ 1.84
CCHCR1-206ENST00000448141 AIMP1Q12904 312 aaKnown RBP26.55■■□□□ 1.84
CCHCR1-206ENST00000448141 COPS6Q7L5N1 327 aa26.55■■□□□ 1.84
CCHCR1-206ENST00000448141 PELP1Q8IZL8 1130 aaKnown RBP26.55■■□□□ 1.84
CCHCR1-206ENST00000448141 NIP7Q9Y221 180 aaKnown RBP eCLIP26.54■■□□□ 1.84
CCHCR1-206ENST00000448141 TGFB2P61812 414 aa26.53■■□□□ 1.84
CCHCR1-206ENST00000448141 GOLGA2Q08379 1002 aa26.53■■□□□ 1.84
CCHCR1-206ENST00000448141 TWISTNBQ3B726 338 aaPredicted RBP26.53■■□□□ 1.84
CCHCR1-206ENST00000448141 MYH16Q9H6N6 1097 aa26.53■■□□□ 1.84
CCHCR1-206ENST00000448141 A0A0G2JLW4 131 aa26.52■■□□□ 1.84
CCHCR1-206ENST00000448141 GPR162Q16538 588 aa26.52■■□□□ 1.84
CCHCR1-206ENST00000448141 HYPKQ9NX55 129 aa26.52■■□□□ 1.84
CCHCR1-206ENST00000448141 ANKRD31Q8N7Z5 1873 aa26.51■■□□□ 1.83
CCHCR1-206ENST00000448141 ANKRD36CQ5JPF3 1778 aa26.51■■□□□ 1.83
CCHCR1-206ENST00000448141 CCDC30Q5VVM6 783 aa26.51■■□□□ 1.83
CCHCR1-206ENST00000448141 PRR5LQ6MZQ0 368 aa26.51■■□□□ 1.83
CCHCR1-206ENST00000448141 WWC3Q9ULE0 1092 aa26.51■■□□□ 1.83
CCHCR1-206ENST00000448141 ATP10DQ9P241 1426 aa26.5■■□□□ 1.83
CCHCR1-206ENST00000448141 DPEP1P16444 411 aa26.5■■□□□ 1.83
CCHCR1-206ENST00000448141 EXOSC9Q06265 439 aaKnown RBP26.5■■□□□ 1.83
CCHCR1-206ENST00000448141 GIGYF2Q6Y7W6 1299 aaKnown RBP26.5■■□□□ 1.83
CCHCR1-206ENST00000448141 CNBD1Q8NA66 436 aa26.5■■□□□ 1.83
CCHCR1-206ENST00000448141 CHMP4AQ9BY43 222 aa26.5■■□□□ 1.83
CCHCR1-206ENST00000448141 BRCA1P38398 1863 aaKnown RBP26.49■■□□□ 1.83
CCHCR1-206ENST00000448141 NPHP1O15259 732 aa26.49■■□□□ 1.83
CCHCR1-206ENST00000448141 NBPF5PQ86XG9 351 aaPredicted RBP26.49■■□□□ 1.83
CCHCR1-206ENST00000448141 CCDC24Q8N4L8 307 aa26.49■■□□□ 1.83
CCHCR1-206ENST00000448141 FAM177BA6PVY3 158 aa26.48■■□□□ 1.83
CCHCR1-206ENST00000448141 GPTP24298 496 aa26.48■■□□□ 1.83
CCHCR1-206ENST00000448141 TCERG1O14776 1098 aaKnown RBP26.47■■□□□ 1.83
CCHCR1-206ENST00000448141 YBX3P16989 372 aaKnown RBP eCLIP26.47■■□□□ 1.83
CCHCR1-206ENST00000448141 ARFGEF2Q9Y6D5 1785 aa26.47■■□□□ 1.83
CCHCR1-206ENST00000448141 CHRNA5P30532 468 aa26.46■■□□□ 1.83
CCHCR1-206ENST00000448141 ZNF34Q8IZ26 560 aa26.46■■□□□ 1.83
CCHCR1-206ENST00000448141 PHAXQ9H814 394 aaKnown RBP26.46■■□□□ 1.83
CCHCR1-206ENST00000448141 DLEC1Q9Y238 1755 aa26.46■■□□□ 1.83
CCHCR1-206ENST00000448141 UBN2Q6ZU65 1347 aa26.45■■□□□ 1.83
CCHCR1-206ENST00000448141 KCNA3P22001 575 aa26.45■■□□□ 1.82
CCHCR1-206ENST00000448141 ST5P78524 1137 aa26.45■■□□□ 1.82
CCHCR1-206ENST00000448141 STK31Q9BXU1 1019 aa26.45■■□□□ 1.82
CCHCR1-206ENST00000448141 E9PSI1 815 aa26.44■■□□□ 1.82
CCHCR1-206ENST00000448141 VAMP4O75379 141 aa26.44■■□□□ 1.82
CCHCR1-206ENST00000448141 TPTE2Q6XPS3 522 aa26.44■■□□□ 1.82
CCHCR1-206ENST00000448141 ANKRD13DQ6ZTN6 518 aa26.44■■□□□ 1.82
CCHCR1-206ENST00000448141 PLBD2Q8NHP8 589 aa26.44■■□□□ 1.82
CCHCR1-206ENST00000448141 BRIP1Q9BX63 1249 aa26.44■■□□□ 1.82
CCHCR1-206ENST00000448141 COL11A2P13942 1736 aaPredicted RBP26.43■■□□□ 1.82
CCHCR1-206ENST00000448141 HSP90AB3PQ58FF7 597 aa26.42■■□□□ 1.82
CCHCR1-206ENST00000448141 C2CD5Q86YS7 1000 aa26.42■■□□□ 1.82
CCHCR1-206ENST00000448141 NYXQ9GZU5 481 aa26.42■■□□□ 1.82
CCHCR1-206ENST00000448141 GOLGB1Q14789 3259 aaKnown RBP26.42■■□□□ 1.82
CCHCR1-206ENST00000448141 GTF2E1P29083 439 aaPredicted RBP26.41■■□□□ 1.82
CCHCR1-206ENST00000448141 PDE6BP35913 854 aa26.41■■□□□ 1.82
CCHCR1-206ENST00000448141 SLFN5Q08AF3 891 aa26.41■■□□□ 1.82
CCHCR1-206ENST00000448141 SUSD4Q5VX71 490 aa26.41■■□□□ 1.82
CCHCR1-206ENST00000448141 CDCA7LQ96GN5 454 aa26.41■■□□□ 1.82
CCHCR1-206ENST00000448141 CACNA1FO60840 1977 aa26.4■■□□□ 1.82
CCHCR1-206ENST00000448141 H0YIN7 160 aa26.4■■□□□ 1.82
CCHCR1-206ENST00000448141 TCIRG1Q13488 830 aa26.4■■□□□ 1.82
CCHCR1-206ENST00000448141 PIM2Q9P1W9 311 aa26.4■■□□□ 1.82
CCHCR1-206ENST00000448141 BCS1LQ9Y276 419 aa26.4■■□□□ 1.82
CCHCR1-206ENST00000448141 IBTKQ9P2D0 1353 aaPredicted RBP26.39■■□□□ 1.82
CCHCR1-206ENST00000448141 SLC4A2P04920 1241 aa26.39■■□□□ 1.82
CCHCR1-206ENST00000448141 PARP10Q53GL7 1025 aa26.39■■□□□ 1.82
CCHCR1-206ENST00000448141 NUTM1Q86Y26 1132 aa26.39■■□□□ 1.82
CCHCR1-206ENST00000448141 ARFGEF1Q9Y6D6 1849 aa26.39■■□□□ 1.81
CCHCR1-206ENST00000448141 TNRC6CQ9HCJ0 1690 aaKnown RBP26.38■■□□□ 1.81
CCHCR1-206ENST00000448141 GRIN3BO60391 1043 aa26.38■■□□□ 1.81
CCHCR1-206ENST00000448141 PPP1R42Q7Z4L9 355 aa26.38■■□□□ 1.81
CCHCR1-206ENST00000448141 RIC3Q7Z5B4 369 aa26.38■■□□□ 1.81
CCHCR1-206ENST00000448141 ABCC12Q96J65 1359 aa26.37■■□□□ 1.81
CCHCR1-206ENST00000448141 NTSR2O95665 410 aa26.37■■□□□ 1.81
CCHCR1-206ENST00000448141 HNRNPUQ00839 825 aaKnown RBP eCLIP26.37■■□□□ 1.81
CCHCR1-206ENST00000448141 ERFEQ4G0M1 354 aa26.37■■□□□ 1.81
CCHCR1-206ENST00000448141 G2E3Q7L622 706 aa26.37■■□□□ 1.81
CCHCR1-206ENST00000448141 NLRP10Q86W26 655 aa26.37■■□□□ 1.81
CCHCR1-206ENST00000448141 CHD4Q14839 1912 aa26.37■■□□□ 1.81
CCHCR1-206ENST00000448141 DDX58O95786 925 aaKnown RBP26.36■■□□□ 1.81
CCHCR1-206ENST00000448141 DALRD3Q5D0E6 543 aaKnown RBP26.36■■□□□ 1.81
CCHCR1-206ENST00000448141 PDZRN3Q9UPQ7 1066 aa26.36■■□□□ 1.81
CCHCR1-206ENST00000448141 CACNA1SQ13698 1873 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms