RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 CALD1Q05682 793 aaKnown RBP20.64■□□□□ 0.89
BCRP3-201ENST00000447261 LMOD3Q0VAK6 560 aa20.64■□□□□ 0.89
BCRP3-201ENST00000447261 DALRD3Q5D0E6 543 aaKnown RBP20.64■□□□□ 0.89
BCRP3-201ENST00000447261 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
BCRP3-201ENST00000447261 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
BCRP3-201ENST00000447261 USP16Q9Y5T5 823 aa20.62■□□□□ 0.89
BCRP3-201ENST00000447261 ARFGEF1Q9Y6D6 1849 aa20.62■□□□□ 0.89
BCRP3-201ENST00000447261 PRAMEF22A3QJZ6 481 aa20.62■□□□□ 0.89
BCRP3-201ENST00000447261 PIP4K2AP48426 406 aaPredicted RBP20.62■□□□□ 0.89
BCRP3-201ENST00000447261 TBC1D9BQ66K14 1250 aa20.62■□□□□ 0.89
BCRP3-201ENST00000447261 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
BCRP3-201ENST00000447261 NRXN2Q9P2S2 1712 aa20.6■□□□□ 0.89
BCRP3-201ENST00000447261 DLG5Q8TDM6 1919 aa20.6■□□□□ 0.89
BCRP3-201ENST00000447261 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
BCRP3-201ENST00000447261 MIS18AQ9NYP9 233 aa20.6■□□□□ 0.89
BCRP3-201ENST00000447261 SCN7AQ01118 1682 aa20.59■□□□□ 0.89
BCRP3-201ENST00000447261 DZIP3Q86Y13 1208 aaKnown RBP20.58■□□□□ 0.89
BCRP3-201ENST00000447261 CARMIL3Q8ND23 1372 aa20.58■□□□□ 0.88
BCRP3-201ENST00000447261 CAMTA2O94983 1202 aa20.57■□□□□ 0.88
BCRP3-201ENST00000447261 C2CD5Q86YS7 1000 aa20.57■□□□□ 0.88
BCRP3-201ENST00000447261 NPHP1O15259 732 aa20.56■□□□□ 0.88
BCRP3-201ENST00000447261 C9orf131Q5VYM1 1079 aa20.56■□□□□ 0.88
BCRP3-201ENST00000447261 CCDC24Q8N4L8 307 aa20.56■□□□□ 0.88
BCRP3-201ENST00000447261 H0YIN7 160 aa20.56■□□□□ 0.88
BCRP3-201ENST00000447261 SETDB2Q96T68 719 aa20.56■□□□□ 0.88
BCRP3-201ENST00000447261 THUMPD2Q9BTF0 503 aaKnown RBP20.56■□□□□ 0.88
BCRP3-201ENST00000447261 FANCIQ9NVI1 1328 aa20.55■□□□□ 0.88
BCRP3-201ENST00000447261 PLIN1O60240 522 aa20.55■□□□□ 0.88
BCRP3-201ENST00000447261 CCDC136Q96JN2 1154 aa20.55■□□□□ 0.88
BCRP3-201ENST00000447261 RARSP54136 660 aaKnown RBP20.54■□□□□ 0.88
BCRP3-201ENST00000447261 EXOC6Q8TAG9 804 aa20.54■□□□□ 0.88
BCRP3-201ENST00000447261 GNAI1P63096 354 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 PDE3AQ14432 1141 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 IFT57Q9NWB7 429 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 RNF181Q9P0P0 153 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 BCORQ6W2J9 1755 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 DLEC1Q9Y238 1755 aa20.53■□□□□ 0.88
BCRP3-201ENST00000447261 CNBD1Q8NA66 436 aa20.52■□□□□ 0.88
BCRP3-201ENST00000447261 ZNF622Q969S3 477 aaKnown RBP eCLIP20.52■□□□□ 0.88
BCRP3-201ENST00000447261 ANKRD31Q8N7Z5 1873 aa20.51■□□□□ 0.87
BCRP3-201ENST00000447261 NBPF26B4DH59 902 aa20.51■□□□□ 0.87
BCRP3-201ENST00000447261 BCAR3O75815 825 aa20.51■□□□□ 0.87
BCRP3-201ENST00000447261 PDE6BP35913 854 aa20.51■□□□□ 0.87
BCRP3-201ENST00000447261 RASSF7Q02833 373 aa20.51■□□□□ 0.87
BCRP3-201ENST00000447261 NBPF10Q6P3W6 841 aaKnown RBP20.51■□□□□ 0.87
BCRP3-201ENST00000447261 NBPF15Q8N660 670 aa20.51■□□□□ 0.87
BCRP3-201ENST00000447261 BRIP1Q9BX63 1249 aa20.51■□□□□ 0.87
BCRP3-201ENST00000447261 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
BCRP3-201ENST00000447261 KIF3CO14782 793 aa20.5■□□□□ 0.87
BCRP3-201ENST00000447261 ZNF853P0CG23 659 aa20.5■□□□□ 0.87
BCRP3-201ENST00000447261 ST5P78524 1137 aa20.5■□□□□ 0.87
BCRP3-201ENST00000447261 KDM3BQ7LBC6 1761 aa20.5■□□□□ 0.87
BCRP3-201ENST00000447261 SBF1O95248 1867 aa20.49■□□□□ 0.87
BCRP3-201ENST00000447261 LAMB4A4D0S4 1761 aa20.49■□□□□ 0.87
BCRP3-201ENST00000447261 EXOSC9Q06265 439 aaKnown RBP20.49■□□□□ 0.87
BCRP3-201ENST00000447261 CLEC4GQ6UXB4 293 aa20.49■□□□□ 0.87
BCRP3-201ENST00000447261 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
BCRP3-201ENST00000447261 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
BCRP3-201ENST00000447261 CRBNQ96SW2 442 aa20.49■□□□□ 0.87
BCRP3-201ENST00000447261 EIF4A1P60842 406 aaKnown RBP20.48■□□□□ 0.87
BCRP3-201ENST00000447261 NBPF5PQ86XG9 351 aaPredicted RBP20.48■□□□□ 0.87
BCRP3-201ENST00000447261 NMRK2Q9NPI5 230 aa20.48■□□□□ 0.87
BCRP3-201ENST00000447261 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
BCRP3-201ENST00000447261 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
BCRP3-201ENST00000447261 CEP350Q5VT06 3117 aa20.48■□□□□ 0.87
BCRP3-201ENST00000447261 COL11A2P13942 1736 aaPredicted RBP20.46■□□□□ 0.87
BCRP3-201ENST00000447261 FAM177BA6PVY3 158 aa20.46■□□□□ 0.87
BCRP3-201ENST00000447261 C20orf194Q5TEA3 1177 aa20.46■□□□□ 0.87
BCRP3-201ENST00000447261 TSPYL4Q9UJ04 414 aa20.46■□□□□ 0.87
BCRP3-201ENST00000447261 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
BCRP3-201ENST00000447261 MS4A1P11836 297 aa20.45■□□□□ 0.86
BCRP3-201ENST00000447261 AAMPQ13685 434 aa20.45■□□□□ 0.86
BCRP3-201ENST00000447261 MYL6BP14649 208 aa20.44■□□□□ 0.86
BCRP3-201ENST00000447261 HLFQ16534 295 aa20.44■□□□□ 0.86
BCRP3-201ENST00000447261 ALDH1L2Q3SY69 923 aa20.44■□□□□ 0.86
BCRP3-201ENST00000447261 C21orf2O43822 256 aa20.43■□□□□ 0.86
BCRP3-201ENST00000447261 LMNB1P20700 586 aa20.43■□□□□ 0.86
BCRP3-201ENST00000447261 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
BCRP3-201ENST00000447261 HSPA6P17066 643 aa20.43■□□□□ 0.86
BCRP3-201ENST00000447261 BRPF1P55201 1214 aaPredicted RBP20.43■□□□□ 0.86
BCRP3-201ENST00000447261 CACNA1SQ13698 1873 aa20.43■□□□□ 0.86
BCRP3-201ENST00000447261 CCDC88AQ3V6T2 1871 aa20.43■□□□□ 0.86
BCRP3-201ENST00000447261 NFKBIEO00221 500 aa20.42■□□□□ 0.86
BCRP3-201ENST00000447261 TOMM70O94826 608 aa20.42■□□□□ 0.86
BCRP3-201ENST00000447261 SRGNP10124 158 aa20.42■□□□□ 0.86
BCRP3-201ENST00000447261 TPTE2Q6XPS3 522 aa20.42■□□□□ 0.86
BCRP3-201ENST00000447261 KIF6Q6ZMV9 814 aa20.42■□□□□ 0.86
BCRP3-201ENST00000447261 C16orf71Q8IYS4 520 aaPredicted RBP20.42■□□□□ 0.86
BCRP3-201ENST00000447261 CNKSR1Q969H4 720 aa20.42■□□□□ 0.86
BCRP3-201ENST00000447261 MASTLQ96GX5 879 aa20.42■□□□□ 0.86
BCRP3-201ENST00000447261 RGL2O15211 777 aa20.41■□□□□ 0.86
BCRP3-201ENST00000447261 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
BCRP3-201ENST00000447261 PRELPP51888 382 aa20.41■□□□□ 0.86
BCRP3-201ENST00000447261 STYK1Q6J9G0 422 aa20.41■□□□□ 0.86
BCRP3-201ENST00000447261 MBIPQ9NS73 344 aa20.41■□□□□ 0.86
BCRP3-201ENST00000447261 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms