RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TSR2Q969E8 191 aaKnown RBP19.29■□□□□ 0.68
HDAC4-204ENST00000446876 DPEP1P16444 411 aa19.28■□□□□ 0.68
HDAC4-204ENST00000446876 CCDC24Q8N4L8 307 aa19.28■□□□□ 0.68
HDAC4-204ENST00000446876 ELL2O00472 640 aaPredicted RBP19.27■□□□□ 0.68
HDAC4-204ENST00000446876 HDGFL1Q5TGJ6 251 aa19.27■□□□□ 0.68
HDAC4-204ENST00000446876 ZBTB3Q9H5J0 574 aa19.27■□□□□ 0.68
HDAC4-204ENST00000446876 CHPF2Q9P2E5 772 aa19.27■□□□□ 0.68
HDAC4-204ENST00000446876 ZNF652Q9Y2D9 606 aa19.27■□□□□ 0.68
HDAC4-204ENST00000446876 CHD4Q14839 1912 aa19.27■□□□□ 0.67
HDAC4-204ENST00000446876 MAP3K15Q6ZN16 1313 aa19.26■□□□□ 0.67
HDAC4-204ENST00000446876 CHRNA5P30532 468 aa19.26■□□□□ 0.67
HDAC4-204ENST00000446876 TGFB2P61812 414 aa19.26■□□□□ 0.67
HDAC4-204ENST00000446876 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
HDAC4-204ENST00000446876 KIF6Q6ZMV9 814 aa19.26■□□□□ 0.67
HDAC4-204ENST00000446876 C8orf58Q8NAV2 365 aa19.26■□□□□ 0.67
HDAC4-204ENST00000446876 SETDB2Q96T68 719 aa19.26■□□□□ 0.67
HDAC4-204ENST00000446876 COL11A2P13942 1736 aaPredicted RBP19.25■□□□□ 0.67
HDAC4-204ENST00000446876 GOLGB1Q14789 3259 aaKnown RBP19.25■□□□□ 0.67
HDAC4-204ENST00000446876 DLEC1Q9Y238 1755 aa19.25■□□□□ 0.67
HDAC4-204ENST00000446876 HOXB7P09629 217 aa19.25■□□□□ 0.67
HDAC4-204ENST00000446876 PRR5LQ6MZQ0 368 aa19.25■□□□□ 0.67
HDAC4-204ENST00000446876 CLEC4GQ6UXB4 293 aa19.25■□□□□ 0.67
HDAC4-204ENST00000446876 FAM177BA6PVY3 158 aa19.24■□□□□ 0.67
HDAC4-204ENST00000446876 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
HDAC4-204ENST00000446876 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
HDAC4-204ENST00000446876 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
HDAC4-204ENST00000446876 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
HDAC4-204ENST00000446876 XAGE3Q8WTP9 111 aa19.24■□□□□ 0.67
HDAC4-204ENST00000446876 NIP7Q9Y221 180 aaKnown RBP eCLIP19.24■□□□□ 0.67
HDAC4-204ENST00000446876 UTRNP46939 3433 aa19.24■□□□□ 0.67
HDAC4-204ENST00000446876 ANKRD36CQ5JPF3 1778 aa19.24■□□□□ 0.67
HDAC4-204ENST00000446876 ERVV-1B6SEH8 477 aa19.23■□□□□ 0.67
HDAC4-204ENST00000446876 KCNA3P22001 575 aa19.23■□□□□ 0.67
HDAC4-204ENST00000446876 DDX21Q9NR30 783 aaKnown RBP eCLIP19.23■□□□□ 0.67
HDAC4-204ENST00000446876 IL16Q14005 1332 aa19.23■□□□□ 0.67
HDAC4-204ENST00000446876 COPS6Q7L5N1 327 aa19.22■□□□□ 0.67
HDAC4-204ENST00000446876 MIER1Q8N108 512 aa19.22■□□□□ 0.67
HDAC4-204ENST00000446876 CNBD1Q8NA66 436 aa19.22■□□□□ 0.67
HDAC4-204ENST00000446876 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
HDAC4-204ENST00000446876 ARFGEF1Q9Y6D6 1849 aa19.21■□□□□ 0.67
HDAC4-204ENST00000446876 RGL2O15211 777 aa19.21■□□□□ 0.67
HDAC4-204ENST00000446876 NPHP1O15259 732 aa19.21■□□□□ 0.67
HDAC4-204ENST00000446876 GPTP24298 496 aa19.21■□□□□ 0.67
HDAC4-204ENST00000446876 NBPF5PQ86XG9 351 aaPredicted RBP19.21■□□□□ 0.67
HDAC4-204ENST00000446876 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
HDAC4-204ENST00000446876 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
HDAC4-204ENST00000446876 BCS1LQ9Y276 419 aa19.21■□□□□ 0.67
HDAC4-204ENST00000446876 CACNA1SQ13698 1873 aa19.2■□□□□ 0.66
HDAC4-204ENST00000446876 WDR63Q8IWG1 891 aa19.2■□□□□ 0.66
HDAC4-204ENST00000446876 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
HDAC4-204ENST00000446876 UBN2Q6ZU65 1347 aa19.2■□□□□ 0.66
HDAC4-204ENST00000446876 ARFGEF2Q9Y6D5 1785 aa19.19■□□□□ 0.66
HDAC4-204ENST00000446876 YY1P25490 414 aa19.19■□□□□ 0.66
HDAC4-204ENST00000446876 GIGYF2Q6Y7W6 1299 aaKnown RBP19.19■□□□□ 0.66
HDAC4-204ENST00000446876 C2CD5Q86YS7 1000 aa19.19■□□□□ 0.66
HDAC4-204ENST00000446876 DBF4Q9UBU7 674 aaPredicted RBP19.19■□□□□ 0.66
HDAC4-204ENST00000446876 TCERG1O14776 1098 aaKnown RBP19.18■□□□□ 0.66
HDAC4-204ENST00000446876 GRIN3BO60391 1043 aa19.18■□□□□ 0.66
HDAC4-204ENST00000446876 ST5P78524 1137 aa19.18■□□□□ 0.66
HDAC4-204ENST00000446876 PIM2Q9P1W9 311 aa19.18■□□□□ 0.66
HDAC4-204ENST00000446876 ZNF34Q8IZ26 560 aa19.17■□□□□ 0.66
HDAC4-204ENST00000446876 BRIP1Q9BX63 1249 aa19.17■□□□□ 0.66
HDAC4-204ENST00000446876 ZNF521Q96K83 1311 aa19.17■□□□□ 0.66
HDAC4-204ENST00000446876 ABCC12Q96J65 1359 aa19.17■□□□□ 0.66
HDAC4-204ENST00000446876 TWISTNBQ3B726 338 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-204ENST00000446876 NUTM1Q86Y26 1132 aa19.16■□□□□ 0.66
HDAC4-204ENST00000446876 PHAXQ9H814 394 aaKnown RBP19.16■□□□□ 0.66
HDAC4-204ENST00000446876 HYPKQ9NX55 129 aa19.16■□□□□ 0.66
HDAC4-204ENST00000446876 H0YIN7 160 aa19.15■□□□□ 0.66
HDAC4-204ENST00000446876 DALRD3Q5D0E6 543 aaKnown RBP19.15■□□□□ 0.66
HDAC4-204ENST00000446876 SUSD4Q5VX71 490 aa19.15■□□□□ 0.66
HDAC4-204ENST00000446876 TPTE2Q6XPS3 522 aa19.15■□□□□ 0.66
HDAC4-204ENST00000446876 ZNF428Q96B54 188 aa19.15■□□□□ 0.66
HDAC4-204ENST00000446876 PDE6BP35913 854 aa19.14■□□□□ 0.65
HDAC4-204ENST00000446876 EXOSC9Q06265 439 aaKnown RBP19.14■□□□□ 0.65
HDAC4-204ENST00000446876 CCDC30Q5VVM6 783 aa19.14■□□□□ 0.65
HDAC4-204ENST00000446876 GTF2E1P29083 439 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-204ENST00000446876 ERFEQ4G0M1 354 aa19.13■□□□□ 0.65
HDAC4-204ENST00000446876 PLBD2Q8NHP8 589 aa19.13■□□□□ 0.65
HDAC4-204ENST00000446876 ZNF622Q969S3 477 aaKnown RBP eCLIP19.13■□□□□ 0.65
HDAC4-204ENST00000446876 SLX4Q8IY92 1834 aa19.12■□□□□ 0.65
HDAC4-204ENST00000446876 IBTKQ9P2D0 1353 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-204ENST00000446876 NTSR2O95665 410 aa19.12■□□□□ 0.65
HDAC4-204ENST00000446876 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
HDAC4-204ENST00000446876 ANKRD13DQ6ZTN6 518 aa19.12■□□□□ 0.65
HDAC4-204ENST00000446876 NYXQ9GZU5 481 aa19.12■□□□□ 0.65
HDAC4-204ENST00000446876 TCIRG1Q13488 830 aa19.11■□□□□ 0.65
HDAC4-204ENST00000446876 HSP90AB3PQ58FF7 597 aa19.11■□□□□ 0.65
HDAC4-204ENST00000446876 ARHGAP27Q6ZUM4 889 aa19.11■□□□□ 0.65
HDAC4-204ENST00000446876 MYH16Q9H6N6 1097 aa19.11■□□□□ 0.65
HDAC4-204ENST00000446876 ATP5J2-PTCD1G3V325 749 aa19.1■□□□□ 0.65
HDAC4-204ENST00000446876 SRGNP10124 158 aa19.1■□□□□ 0.65
HDAC4-204ENST00000446876 PARP10Q53GL7 1025 aa19.1■□□□□ 0.65
HDAC4-204ENST00000446876 NLRP10Q86W26 655 aa19.1■□□□□ 0.65
HDAC4-204ENST00000446876 TTLL6Q8N841 843 aa19.1■□□□□ 0.65
HDAC4-204ENST00000446876 LAMB2P55268 1798 aa19.1■□□□□ 0.65
HDAC4-204ENST00000446876 VAMP4O75379 141 aa19.09■□□□□ 0.65
HDAC4-204ENST00000446876 G2E3Q7L622 706 aa19.09■□□□□ 0.65
HDAC4-204ENST00000446876 PPP1R42Q7Z4L9 355 aa19.09■□□□□ 0.65
HDAC4-204ENST00000446876 RIC3Q7Z5B4 369 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms