RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ZKSCAN3Q9BRR0 538 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 ESPNB1AK53 854 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 EIF5P55010 431 aaKnown RBP9.35□□□□□ -0.91
RIF1-205ENST00000444746 CCDC112Q8NEF3 446 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 TMX3Q96JJ7 454 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 SLC5A1P13866 664 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 C8orf34Q49A92 452 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 ANKRD13DQ6ZTN6 518 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 AK7Q96M32 723 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 DHX29Q7Z478 1369 aaKnown RBP9.35□□□□□ -0.91
RIF1-205ENST00000444746 FAM135AQ9P2D6 1515 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
RIF1-205ENST00000444746 GPIHBP1Q8IV16 184 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 CWC25Q9NXE8 425 aaPredicted RBP9.35□□□□□ -0.91
RIF1-205ENST00000444746 GPATCH8Q9UKJ3 1502 aaKnown RBP9.34□□□□□ -0.91
RIF1-205ENST00000444746 SYCP1Q15431 976 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 RPGRQ92834 1020 aaKnown RBP9.34□□□□□ -0.91
RIF1-205ENST00000444746 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 LIMCH1Q9UPQ0 1083 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 RPRD2Q5VT52 1461 aaKnown RBP9.34□□□□□ -0.91
RIF1-205ENST00000444746 NUCB1Q02818 461 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 TMEM67Q5HYA8 995 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 ZNF444Q8N0Y2 327 aaPredicted RBP9.34□□□□□ -0.91
RIF1-205ENST00000444746 EYA1Q99502 592 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 AMOTQ4VCS5 1084 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 HSP90B2PQ58FF3 399 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 CCDC181Q5TID7 509 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 JMYQ8N9B5 988 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 PLIN2Q99541 437 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 HYPKQ9NX55 129 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 AKAP2Q9Y2D5 859 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 BICRAQ9NZM4 1560 aa9.34□□□□□ -0.91
RIF1-205ENST00000444746 BAG4O95429 457 aaKnown RBP9.34□□□□□ -0.91
RIF1-205ENST00000444746 SSRP1Q08945 709 aaKnown RBP9.34□□□□□ -0.91
RIF1-205ENST00000444746 U3KPZ7 1027 aaPredicted RBP9.34□□□□□ -0.91
RIF1-205ENST00000444746 MARCKSP29966 332 aaPredicted RBP9.33□□□□□ -0.92
RIF1-205ENST00000444746 TFCP2Q12800 502 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 MAP3K12Q12852 859 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 LGR6Q9HBX8 967 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 HMGXB3Q12766 1538 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 TERF1P54274 439 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 NEK1Q96PY6 1258 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 PAF1Q8N7H5 531 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 CFAP45Q9UL16 551 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 KIF14Q15058 1648 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 KLF18A0A0U1RQI7 1052 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 AFMP43652 599 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 SETQ01105 290 aaPredicted RBP9.33□□□□□ -0.92
RIF1-205ENST00000444746 ORC3Q9UBD5 711 aaPredicted RBP9.33□□□□□ -0.92
RIF1-205ENST00000444746 CLIP2Q9UDT6 1046 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 PDE1AP54750 535 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 GRM1Q13255 1194 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 KRT32Q14532 448 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 RBM26Q5T8P6 1007 aaKnown RBP9.33□□□□□ -0.92
RIF1-205ENST00000444746 TAX1BP1Q86VP1 789 aa9.33□□□□□ -0.92
RIF1-205ENST00000444746 ZNF594Q96JF6 807 aaPredicted RBP9.33□□□□□ -0.92
RIF1-205ENST00000444746 C16orf45Q96MC5 204 aaPredicted RBP9.33□□□□□ -0.92
RIF1-205ENST00000444746 RBM8AQ9Y5S9 174 aaKnown RBP9.33□□□□□ -0.92
RIF1-205ENST00000444746 POGZQ7Z3K3 1410 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 ANKRD62A6NC57 917 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 STX6O43752 255 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 ZNHIT6Q9NWK9 470 aaKnown RBP9.32□□□□□ -0.92
RIF1-205ENST00000444746 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
RIF1-205ENST00000444746 EVI5LQ96CN4 794 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 RNF216Q9NWF9 866 aaPredicted RBP9.32□□□□□ -0.92
RIF1-205ENST00000444746 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
RIF1-205ENST00000444746 Q6ZUG5 572 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 TMC6Q7Z403 805 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 TBC1D32Q96NH3 1257 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 ATP10BO94823 1461 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 MAP3K1Q13233 1512 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 KCNA6P17658 529 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 TTLL12Q14166 644 aaPredicted RBP9.32□□□□□ -0.92
RIF1-205ENST00000444746 KIAA1328Q86T90 577 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 CDKL5O76039 1030 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 DENND4BO75064 1496 aaPredicted RBP9.32□□□□□ -0.92
RIF1-205ENST00000444746 URI1O94763 535 aaPredicted RBP9.32□□□□□ -0.92
RIF1-205ENST00000444746 APOBRQ0VD83 1088 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 TESK2Q96S53 571 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 ORAI2Q96SN7 254 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 SLC4A4Q9Y6R1 1079 aa9.32□□□□□ -0.92
RIF1-205ENST00000444746 TSPY2A6NKD2 308 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
RIF1-205ENST00000444746 CYP7A1P22680 504 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 CNNM3Q8NE01 707 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 PLCD4Q9BRC7 762 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 ZSCAN23Q3MJ62 389 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 VAMP4O75379 141 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 USP48Q86UV5 1035 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 ADCY5O95622 1261 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 DNM1Q05193 864 aaKnown RBP9.31□□□□□ -0.92
RIF1-205ENST00000444746 PAXIP1Q6ZW49 1069 aaPredicted RBP9.31□□□□□ -0.92
RIF1-205ENST00000444746 SEC63Q9UGP8 760 aaKnown RBP9.31□□□□□ -0.92
RIF1-205ENST00000444746 TNRQ92752 1358 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 IDEP14735 1019 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 RFC4P35249 363 aa9.31□□□□□ -0.92
RIF1-205ENST00000444746 CCDC183Q5T5S1 534 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms