RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 PAPPAQ13219 1627 aa11.54□□□□□ -0.56
CCNDBP1-202ENST00000444658 COL15A1P39059 1388 aa11.54□□□□□ -0.56
CCNDBP1-202ENST00000444658 VIRMAQ69YN4 1812 aaKnown RBP11.54□□□□□ -0.56
CCNDBP1-202ENST00000444658 A1BGP04217 495 aa11.54□□□□□ -0.56
CCNDBP1-202ENST00000444658 SLC4A9Q96Q91 983 aa11.54□□□□□ -0.56
CCNDBP1-202ENST00000444658 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
CCNDBP1-202ENST00000444658 RGL2O15211 777 aa11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 IL6STP40189 918 aaPredicted RBP11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 AIMP1Q12904 312 aaKnown RBP11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 ZNF772Q68DY9 489 aaPredicted RBP11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 CHD1LQ86WJ1 897 aa11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 SSH3Q8TE77 659 aa11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 SYTL4Q96C24 671 aaPredicted RBP11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 GLI3P10071 1580 aa11.53□□□□□ -0.56
CCNDBP1-202ENST00000444658 NEURL1BA8MQ27 555 aa11.52□□□□□ -0.56
CCNDBP1-202ENST00000444658 ERVV-1B6SEH8 477 aa11.52□□□□□ -0.56
CCNDBP1-202ENST00000444658 GRM8O00222 908 aa11.52□□□□□ -0.56
CCNDBP1-202ENST00000444658 GCKRQ14397 625 aa11.52□□□□□ -0.56
CCNDBP1-202ENST00000444658 C1orf115Q9H7X2 142 aa11.52□□□□□ -0.56
CCNDBP1-202ENST00000444658 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.56
CCNDBP1-202ENST00000444658 WNK3Q9BYP7 1800 aa11.52□□□□□ -0.56
CCNDBP1-202ENST00000444658 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 SIK1P57059 783 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 CCDC191Q8NCU4 936 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 TOGARAM1Q9Y4F4 1720 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 RAB11FIP3O75154 756 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 TCIRG1Q13488 830 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 HSP90AB4PQ58FF6 505 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 SEPT12Q8IYM1 358 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 LRRFIP2Q9Y608 721 aaKnown RBP11.51□□□□□ -0.57
CCNDBP1-202ENST00000444658 H7C1W4 665 aa11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 ATP6V1AP38606 617 aa11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 EIF5P55010 431 aaKnown RBP11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 CWF19L2Q2TBE0 894 aaKnown RBP11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 ANKRD45Q5TZF3 282 aa11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 ACSBG1Q96GR2 724 aa11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 MYD88Q99836 296 aa11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 ISCA1Q9BUE6 129 aa11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
CCNDBP1-202ENST00000444658 THSD7AQ9UPZ6 1657 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 KCNQ2O43526 872 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 PDE4AP27815 886 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 RBM6P78332 1123 aaKnown RBP11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 INTS5Q6P9B9 1019 aaKnown RBP11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 GIGYF2Q6Y7W6 1299 aaKnown RBP11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 KIF6Q6ZMV9 814 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 FAM196AQ6ZSG2 479 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 TTLL7Q6ZT98 887 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 MAP3K15Q6ZN16 1313 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
CCNDBP1-202ENST00000444658 CASP7P55210 303 aa11.48□□□□□ -0.57
CCNDBP1-202ENST00000444658 RABL6Q3YEC7 729 aaPredicted RBP11.48□□□□□ -0.57
CCNDBP1-202ENST00000444658 PPP1R42Q7Z4L9 355 aa11.48□□□□□ -0.57
CCNDBP1-202ENST00000444658 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
CCNDBP1-202ENST00000444658 CCDC87Q9NVE4 849 aa11.48□□□□□ -0.57
CCNDBP1-202ENST00000444658 CWC25Q9NXE8 425 aaPredicted RBP11.48□□□□□ -0.57
CCNDBP1-202ENST00000444658 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
CCNDBP1-202ENST00000444658 PNMA6EA0A0J9YXQ4 647 aa11.47□□□□□ -0.57
CCNDBP1-202ENST00000444658 RGS3P49796 1198 aa11.47□□□□□ -0.57
CCNDBP1-202ENST00000444658 FBXO41Q8TF61 875 aa11.47□□□□□ -0.57
CCNDBP1-202ENST00000444658 KAZALD1Q96I82 304 aa11.47□□□□□ -0.57
CCNDBP1-202ENST00000444658 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
CCNDBP1-202ENST00000444658 C5P01031 1676 aa11.47□□□□□ -0.57
CCNDBP1-202ENST00000444658 LAMB4A4D0S4 1761 aa11.47□□□□□ -0.57
CCNDBP1-202ENST00000444658 N4BP2Q86UW6 1770 aaPredicted RBP11.47□□□□□ -0.57
CCNDBP1-202ENST00000444658 A0A087WZG4 1122 aa11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 A0A0G2JS52 829 aa11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 SRGAP3O43295 1099 aa11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 ITGB4P16144 1822 aa11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 PIP4K2AP48426 406 aaPredicted RBP11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 ZNF831Q5JPB2 1677 aa11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 CLEC4GQ6UXB4 293 aa11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 LRRCC1Q9C099 1032 aa11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 ZBTB1Q9Y2K1 713 aa11.46□□□□□ -0.57
CCNDBP1-202ENST00000444658 CICQ96RK0 1608 aaPredicted RBP11.46□□□□□ -0.58
CCNDBP1-202ENST00000444658 CNTNAP4Q9C0A0 1308 aa11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 EIF5BO60841 1220 aaKnown RBP11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 CRKLP46109 303 aaKnown RBP11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 ITPK1Q13572 414 aa11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 KRT27Q7Z3Y8 459 aa11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 ERC1Q8IUD2 1116 aa11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 PLA2G12BQ9BX93 195 aa11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 LNPKQ9C0E8 428 aa11.45□□□□□ -0.58
CCNDBP1-202ENST00000444658 PCCAP05165 728 aaPredicted RBP11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 BMP2KLQ5H9B9 411 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 AK7Q96M32 723 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 ATP5J2-PTCD1G3V325 749 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms