RNA–Protein interactions for RNA: ENST00000443980.6

NECAP2-202, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2 BASIC

Gene NECAP2, Length 1,929 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-202ENST00000443980 TOM1L2Q6ZVM7 507 aa16.69■□□□□ 0.26
NECAP2-202ENST00000443980 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
NECAP2-202ENST00000443980 RBM27Q9P2N5 1060 aaKnown RBP16.69■□□□□ 0.26
NECAP2-202ENST00000443980 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
NECAP2-202ENST00000443980 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
NECAP2-202ENST00000443980 IFNL2Q8IZJ0 200 aa16.68■□□□□ 0.26
NECAP2-202ENST00000443980 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
NECAP2-202ENST00000443980 CARD10Q9BWT7 1032 aa16.68■□□□□ 0.26
NECAP2-202ENST00000443980 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
NECAP2-202ENST00000443980 COL22A1Q8NFW1 1626 aaPredicted RBP16.67■□□□□ 0.26
NECAP2-202ENST00000443980 PHF14O94880 888 aa16.67■□□□□ 0.26
NECAP2-202ENST00000443980 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
NECAP2-202ENST00000443980 CCDC39Q9UFE4 941 aa16.67■□□□□ 0.26
NECAP2-202ENST00000443980 N4BP2Q86UW6 1770 aaPredicted RBP16.67■□□□□ 0.26
NECAP2-202ENST00000443980 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
NECAP2-202ENST00000443980 SYCE3A1L190 88 aa16.66■□□□□ 0.26
NECAP2-202ENST00000443980 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
NECAP2-202ENST00000443980 PALD1Q9ULE6 856 aa16.66■□□□□ 0.26
NECAP2-202ENST00000443980 LRRFIP2Q9Y608 721 aaKnown RBP16.66■□□□□ 0.26
NECAP2-202ENST00000443980 EVA1CP58658 441 aa16.66■□□□□ 0.26
NECAP2-202ENST00000443980 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
NECAP2-202ENST00000443980 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
NECAP2-202ENST00000443980 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
NECAP2-202ENST00000443980 HSPA4P34932 840 aa16.65■□□□□ 0.26
NECAP2-202ENST00000443980 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
NECAP2-202ENST00000443980 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
NECAP2-202ENST00000443980 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
NECAP2-202ENST00000443980 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
NECAP2-202ENST00000443980 TOM1O60784 492 aa16.64■□□□□ 0.26
NECAP2-202ENST00000443980 TSPY26PQ9H489 355 aa16.64■□□□□ 0.26
NECAP2-202ENST00000443980 ZKSCAN5Q9Y2L8 839 aa16.64■□□□□ 0.26
NECAP2-202ENST00000443980 CYP27B1O15528 508 aa16.64■□□□□ 0.25
NECAP2-202ENST00000443980 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
NECAP2-202ENST00000443980 FOXD4L4Q8WXT5 416 aaPredicted RBP16.64■□□□□ 0.25
NECAP2-202ENST00000443980 SLC52A2Q9HAB3 445 aa16.64■□□□□ 0.25
NECAP2-202ENST00000443980 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
NECAP2-202ENST00000443980 POLA2Q14181 598 aa16.63■□□□□ 0.25
NECAP2-202ENST00000443980 KLHL34Q8N239 644 aa16.63■□□□□ 0.25
NECAP2-202ENST00000443980 STRN4Q9NRL3 753 aa16.63■□□□□ 0.25
NECAP2-202ENST00000443980 NSFL1CQ9UNZ2 370 aaKnown RBP16.63■□□□□ 0.25
NECAP2-202ENST00000443980 PCDH11XQ9BZA7 1347 aa16.63■□□□□ 0.25
NECAP2-202ENST00000443980 PCDH11YQ9BZA8 1340 aa16.63■□□□□ 0.25
NECAP2-202ENST00000443980 MRC1P22897 1456 aa16.63■□□□□ 0.25
NECAP2-202ENST00000443980 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
NECAP2-202ENST00000443980 KCNQ3O43525 872 aa16.62■□□□□ 0.25
NECAP2-202ENST00000443980 IL2RBP14784 551 aa16.62■□□□□ 0.25
NECAP2-202ENST00000443980 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
NECAP2-202ENST00000443980 ZCRB1Q8TBF4 217 aaKnown RBP16.62■□□□□ 0.25
NECAP2-202ENST00000443980 SCN11AQ9UI33 1791 aa16.62■□□□□ 0.25
NECAP2-202ENST00000443980 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
NECAP2-202ENST00000443980 HSP90AB4PQ58FF6 505 aa16.62■□□□□ 0.25
NECAP2-202ENST00000443980 LETM1O95202 739 aaPredicted RBP16.61■□□□□ 0.25
NECAP2-202ENST00000443980 UVSSAQ2YD98 709 aa16.61■□□□□ 0.25
NECAP2-202ENST00000443980 UNC5CLQ8IV45 518 aa16.61■□□□□ 0.25
NECAP2-202ENST00000443980 FAM184AQ8NB25 1140 aa16.61■□□□□ 0.25
NECAP2-202ENST00000443980 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
NECAP2-202ENST00000443980 PDCL3Q9H2J4 239 aa16.61■□□□□ 0.25
NECAP2-202ENST00000443980 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
NECAP2-202ENST00000443980 SURF6O75683 361 aaKnown RBP16.6■□□□□ 0.25
NECAP2-202ENST00000443980 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 TMEM87AQ8NBN3 555 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 COL16A1Q07092 1604 aaPredicted RBP16.6■□□□□ 0.25
NECAP2-202ENST00000443980 SGSM2O43147 1006 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
NECAP2-202ENST00000443980 PPP1R42Q7Z4L9 355 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 PHLPP1O60346 1717 aa16.6■□□□□ 0.25
NECAP2-202ENST00000443980 ZNF790Q6PG37 636 aa16.59■□□□□ 0.25
NECAP2-202ENST00000443980 USP48Q86UV5 1035 aa16.59■□□□□ 0.25
NECAP2-202ENST00000443980 NFATC2IPQ8NCF5 419 aa16.59■□□□□ 0.25
NECAP2-202ENST00000443980 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
NECAP2-202ENST00000443980 IL1RAPL2Q9NP60 686 aa16.59■□□□□ 0.25
NECAP2-202ENST00000443980 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
NECAP2-202ENST00000443980 RAD50Q92878 1312 aa16.59■□□□□ 0.25
NECAP2-202ENST00000443980 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.25
NECAP2-202ENST00000443980 NOL8Q76FK4 1167 aaKnown RBP16.58■□□□□ 0.25
NECAP2-202ENST00000443980 NUTM1Q86Y26 1132 aa16.58■□□□□ 0.25
NECAP2-202ENST00000443980 PI4K2BQ8TCG2 481 aa16.58■□□□□ 0.25
NECAP2-202ENST00000443980 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
NECAP2-202ENST00000443980 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.24
NECAP2-202ENST00000443980 CABP4P57796 275 aa16.57■□□□□ 0.24
NECAP2-202ENST00000443980 DBF4Q9UBU7 674 aaPredicted RBP16.57■□□□□ 0.24
NECAP2-202ENST00000443980 LIMCH1Q9UPQ0 1083 aa16.57■□□□□ 0.24
NECAP2-202ENST00000443980 SNX14Q9Y5W7 946 aa16.57■□□□□ 0.24
NECAP2-202ENST00000443980 USP42Q9H9J4 1324 aaKnown RBP16.57■□□□□ 0.24
NECAP2-202ENST00000443980 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
NECAP2-202ENST00000443980 TTC14Q96N46 770 aa16.57■□□□□ 0.24
NECAP2-202ENST00000443980 MAP7D2Q96T17 732 aa16.57■□□□□ 0.24
NECAP2-202ENST00000443980 CHPF2Q9P2E5 772 aa16.57■□□□□ 0.24
NECAP2-202ENST00000443980 R3HCC1Q9Y3T6 440 aaKnown RBP16.57■□□□□ 0.24
NECAP2-202ENST00000443980 TTC41PQ6P2S7 1318 aa16.56■□□□□ 0.24
NECAP2-202ENST00000443980 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
NECAP2-202ENST00000443980 ZSCAN22P10073 491 aaPredicted RBP16.56■□□□□ 0.24
NECAP2-202ENST00000443980 CCDC183Q5T5S1 534 aa16.56■□□□□ 0.24
NECAP2-202ENST00000443980 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
NECAP2-202ENST00000443980 PHAXQ9H814 394 aaKnown RBP16.56■□□□□ 0.24
NECAP2-202ENST00000443980 HDAC5Q9UQL6 1122 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms