RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 EIF1AYO14602 144 aaKnown RBP7.61□□□□□ -1.19
TM9SF3-202ENST00000443638 RAB11FIP3O75154 756 aa7.61□□□□□ -1.19
TM9SF3-202ENST00000443638 BRD2P25440 801 aaKnown RBP7.61□□□□□ -1.19
TM9SF3-202ENST00000443638 HIRAP54198 1017 aaPredicted RBP7.61□□□□□ -1.19
TM9SF3-202ENST00000443638 MARCH6O60337 910 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 ATF4P18848 351 aaPredicted RBP7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 SMTNP53814 917 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 ORC1Q13415 861 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 SERINC3Q13530 473 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 KCNB2Q92953 911 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 BRINP2Q9C0B6 783 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 SLC6A16Q9GZN6 736 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 DNAJC25Q9H1X3 360 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 USP3Q9Y6I4 520 aa7.6□□□□□ -1.19
TM9SF3-202ENST00000443638 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 EML1O00423 815 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 OPLAHO14841 1288 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 STK10O94804 968 aaKnown RBP7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 GNRH1P01148 92 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 EIF4BP23588 611 aaKnown RBP7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 HSD3B2P26439 372 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 PTPROQ16827 1216 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 HS2ST1Q7LGA3 356 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 MICAL1Q8TDZ2 1067 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 EDEM1Q92611 657 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 DMGDHQ9UI17 866 aaKnown RBP7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 SPG7Q9UQ90 795 aa7.59□□□□□ -1.19
TM9SF3-202ENST00000443638 LILRA1O75019 489 aa7.58□□□□□ -1.2
TM9SF3-202ENST00000443638 DNM1Q05193 864 aaKnown RBP7.58□□□□□ -1.2
TM9SF3-202ENST00000443638 BMS1Q14692 1282 aaKnown RBP7.58□□□□□ -1.2
TM9SF3-202ENST00000443638 ERMP1Q7Z2K6 904 aa7.58□□□□□ -1.2
TM9SF3-202ENST00000443638 VPS37DQ86XT2 251 aa7.58□□□□□ -1.2
TM9SF3-202ENST00000443638 ZNF295-AS1Q8N0V1 137 aa7.58□□□□□ -1.2
TM9SF3-202ENST00000443638 ESF1Q9H501 851 aaKnown RBP7.58□□□□□ -1.2
TM9SF3-202ENST00000443638 CDK2AP1O14519 115 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 XRCC5P13010 732 aaKnown RBP7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 ZAP70P43403 619 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 NBPF6Q5VWK0 638 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 VASH1Q7L8A9 365 aaPredicted RBP7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 RASGRP4Q8TDF6 673 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 NBPF4Q96M43 638 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.57□□□□□ -1.29e-7■□□□□ 9.9
TM9SF3-202ENST00000443638 POLR3GLQ9BT43 218 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 TMPRSS4Q9NRS4 437 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 GGT7Q9UJ14 662 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 HRH3Q9Y5N1 445 aa7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 MRPL42Q9Y6G3 142 aaKnown RBP7.57□□□□□ -1.2
TM9SF3-202ENST00000443638 GIPC1O14908 333 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 ST13P50502 369 aaKnown RBP7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 KCNC4Q03721 635 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 PAK2Q13177 524 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 RTN1Q16799 776 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 ESCO1Q5FWF5 840 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 CYP2U1Q7Z449 544 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 ZNF784Q8NCA9 323 aaPredicted RBP7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 ZDHHC1Q8WTX9 485 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 GPRASP2Q96D09 838 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 XAGE2Q96GT9 111 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 OSBPL7Q9BZF2 842 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 C12orf49Q9H741 205 aa7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 FCF1Q9Y324 198 aaKnown RBP7.56□□□□□ -1.2
TM9SF3-202ENST00000443638 ENPP3O14638 875 aa7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 VARSP26640 1264 aaKnown RBP7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 WNT7BP56706 349 aa7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 TEAD4Q15561 434 aa7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.55□□□□□ -1.22e-8■□□□□ 9.4
TM9SF3-202ENST00000443638 SH3PXD2AQ5TCZ1 1133 aa7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 MKL1Q969V6 931 aa7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 TRIM52Q96A61 297 aa7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 MTRQ99707 1265 aa7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 GGNBP2Q9H3C7 697 aa7.55□□□□□ -1.2
TM9SF3-202ENST00000443638 hCG_2014768A0A024R1R8 64 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 POTECB2RU33 542 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 IL2RAP01589 272 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 IGBP1P78318 339 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 DGKZQ13574 1117 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 MEI1Q5TIA1 1274 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 NOL8Q76FK4 1167 aaKnown RBP7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 ALDH16A1Q8IZ83 802 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 IFT43Q96FT9 208 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 CDK15Q96Q40 435 aa7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 METTL14Q9HCE5 456 aaKnown RBP7.54□□□□□ -1.2
TM9SF3-202ENST00000443638 SERTM1A2A2V5 107 aa7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 K7ELQ4 463 aaPredicted RBP7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 NEFLP07196 543 aa7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 GRM5P41594 1212 aa7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 DHX9Q08211 1270 aaKnown RBP7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 TAF1CQ15572 869 aaPredicted RBP7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 NKX2-3Q8TAU0 364 aa7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 MRFAP1L1Q96HT8 127 aa7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 KLK14Q9P0G3 267 aa7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 NOP58Q9Y2X3 529 aaKnown RBP7.53□□□□□ -1.2
TM9SF3-202ENST00000443638 CPNE3O75131 537 aaKnown RBP7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 S1PR4O95977 384 aa7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 SKOR1P84550 965 aa7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 TJAP1Q5JTD0 557 aa7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 PI16Q6UXB8 463 aa7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 NUDT16Q96DE0 195 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms