RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 RC3H1Q5TC82 1133 aaKnown RBP3.49□□□□□ -1.85
LINC00393-201ENST00000443621 CLEC4GQ6UXB4 293 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 G2E3Q7L622 706 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 RIC3Q7Z5B4 369 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 CERKQ8TCT0 537 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 MEIS3Q99687 375 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 LRRCC1Q9C099 1032 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 COPRSQ9NQ92 184 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 MIS18AQ9NYP9 233 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 PODXL2Q9NZ53 605 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 C9orf78Q9NZ63 289 aaPredicted RBP3.49□□□□□ -1.85
LINC00393-201ENST00000443621 MAP3K2Q9Y2U5 619 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 RFX7Q2KHR2 1363 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 ABCC12Q96J65 1359 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 TUBGCP6Q96RT7 1819 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 SPEF2Q9C093 1822 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 COL5A3P25940 1745 aaPredicted RBP3.48□□□□□ -1.85
LINC00393-201ENST00000443621 A0A087WZG4 1122 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 UBAP1LF5GYI3 381 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 ERC2O15083 957 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 CIAO1O76071 339 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 REC8O95072 547 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 EIF2S2P20042 333 aaKnown RBP3.48□□□□□ -1.85
LINC00393-201ENST00000443621 ANAPC15P60006 121 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 TCIRG1Q13488 830 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 TTC22Q5TAA0 569 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 ANKRD45Q5TZF3 282 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 GIGYF2Q6Y7W6 1299 aaKnown RBP3.48□□□□□ -1.85
LINC00393-201ENST00000443621 COPS6Q7L5N1 327 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 NPM2Q86SE8 214 aaKnown RBP3.48□□□□□ -1.85
LINC00393-201ENST00000443621 PLEKHM2Q8IWE5 1019 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 CLASRPQ8N2M8 674 aaKnown RBP3.48□□□□□ -1.85
LINC00393-201ENST00000443621 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.48□□□□□ -1.85
LINC00393-201ENST00000443621 SNX21Q969T3 373 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 GPATCH3Q96I76 525 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 TBC1D32Q96NH3 1257 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 ISCA1Q9BUE6 129 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 PHAXQ9H814 394 aaKnown RBP3.48□□□□□ -1.85
LINC00393-201ENST00000443621 USP35Q9P2H5 1018 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 TNNQ9UQP3 1299 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 USP16Q9Y5T5 823 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 AFDNP55196 1824 aaKnown RBP3.48□□□□□ -1.85
LINC00393-201ENST00000443621 NHSQ6T4R5 1651 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 RTL9Q8NET4 1388 aa3.48□□□□□ -1.85
LINC00393-201ENST00000443621 LY75O60449 1722 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 TJP1Q07157 1748 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 DOT1LQ8TEK3 1739 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 MYH3P11055 1940 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 ZBTB7CA1YPR0 619 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 F6X3S4 739 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 SRGAP3O43295 1099 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 KCNQ3O43525 872 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 CDC45O75419 566 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 GLRX3O76003 335 aaKnown RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 PCCAP05165 728 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 IGKV5-2P06315 115 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 CSF1RP07333 972 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 NBPF7P0C2Y1 421 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 CYP19A1P11511 503 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 MX1P20591 662 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 MCM2P49736 904 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 PDE1AP54750 535 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 EIF5P55010 431 aaKnown RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 CASP7P55210 303 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 LRRFIP1Q32MZ4 808 aaKnown RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 PARP10Q53GL7 1025 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 SLC4A10Q6U841 1118 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 KIF6Q6ZMV9 814 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 PPP1R42Q7Z4L9 355 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 ZBTB38Q8NAP3 1195 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 RHPN1Q8TCX5 695 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 XAGE3Q8WTP9 111 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 PIGBQ92521 554 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 ZNF512BQ96KM6 892 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 SNRKQ9NRH2 765 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 STRN4Q9NRL3 753 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 CWC25Q9NXE8 425 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 TRPC5Q9UL62 973 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 ZNF652Q9Y2D9 606 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 LRRFIP2Q9Y608 721 aaKnown RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 RGPD3A6NKT7 1758 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-201ENST00000443621 RGPD4Q7Z3J3 1758 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 NUP98P52948 1817 aa3.47□□□□□ -1.85
LINC00393-201ENST00000443621 MAP3K15Q6ZN16 1313 aa3.46□□□□□ -1.85
LINC00393-201ENST00000443621 RAD50Q92878 1312 aa3.46□□□□□ -1.85
LINC00393-201ENST00000443621 CNTNAP4Q9C0A0 1308 aa3.46□□□□□ -1.85
LINC00393-201ENST00000443621 ATRNO75882 1429 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 RIC1Q4ADV7 1423 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 LAMB2P55268 1798 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 NBPF26B4DH59 902 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 SURF6O75683 361 aaKnown RBP3.46□□□□□ -1.86
LINC00393-201ENST00000443621 ADRA2BP18089 450 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 IL15P40933 162 aaPredicted RBP3.46□□□□□ -1.86
LINC00393-201ENST00000443621 RGS3P49796 1198 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 NT5C2P49902 561 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 G3BP1Q13283 466 aaKnown RBP eCLIP3.46□□□□□ -1.86
LINC00393-201ENST00000443621 SLC39A6Q13433 755 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 NBPF14Q5TI25 921 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 NBPF10Q6P3W6 841 aaKnown RBP3.46□□□□□ -1.86
LINC00393-201ENST00000443621 ZNF34Q8IZ26 560 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms