RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-211ENST00000443563 PDIA6Q15084 440 aa13.97□□□□□ -0.17
HDAC6-211ENST00000443563 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-211ENST00000443563 SETDB2Q96T68 719 aa13.97□□□□□ -0.17
HDAC6-211ENST00000443563 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
HDAC6-211ENST00000443563 CARMIL3Q8ND23 1372 aa13.96□□□□□ -0.17
HDAC6-211ENST00000443563 CACNA1FO60840 1977 aa13.96□□□□□ -0.17
HDAC6-211ENST00000443563 NRXN2Q9P2S2 1712 aa13.96□□□□□ -0.17
HDAC6-211ENST00000443563 POLRMTO00411 1230 aaKnown RBP13.96□□□□□ -0.17
HDAC6-211ENST00000443563 NFIXQ14938 502 aa13.96□□□□□ -0.17
HDAC6-211ENST00000443563 DDR1Q08345 913 aa13.95□□□□□ -0.18
HDAC6-211ENST00000443563 TBC1D9BQ66K14 1250 aa13.95□□□□□ -0.18
HDAC6-211ENST00000443563 LRP10Q7Z4F1 713 aa13.95□□□□□ -0.18
HDAC6-211ENST00000443563 STK31Q9BXU1 1019 aa13.95□□□□□ -0.18
HDAC6-211ENST00000443563 ANXA1P04083 346 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 SERPINB2P05120 415 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 EXOSC9Q06265 439 aaKnown RBP13.94□□□□□ -0.18
HDAC6-211ENST00000443563 PROSER3Q2NL68 480 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 BICDL1Q6ZP65 573 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 TTLL7Q6ZT98 887 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 C10orf71Q711Q0 1435 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 TSPYL6Q8N831 410 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 XAGE3Q8WTP9 111 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-211ENST00000443563 ANKRD36CQ5JPF3 1778 aa13.94□□□□□ -0.18
HDAC6-211ENST00000443563 ATP10DQ9P241 1426 aa13.93□□□□□ -0.18
HDAC6-211ENST00000443563 NPHP1O15259 732 aa13.93□□□□□ -0.18
HDAC6-211ENST00000443563 TGFB2P61812 414 aa13.93□□□□□ -0.18
HDAC6-211ENST00000443563 AIMP1Q12904 312 aaKnown RBP13.93□□□□□ -0.18
HDAC6-211ENST00000443563 HLFQ16534 295 aa13.93□□□□□ -0.18
HDAC6-211ENST00000443563 HSP90AB3PQ58FF7 597 aa13.93□□□□□ -0.18
HDAC6-211ENST00000443563 GIGYF2Q6Y7W6 1299 aaKnown RBP13.93□□□□□ -0.18
HDAC6-211ENST00000443563 ZBTB3Q9H5J0 574 aa13.93□□□□□ -0.18
HDAC6-211ENST00000443563 NIP7Q9Y221 180 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDAC6-211ENST00000443563 GOLGB1Q14789 3259 aaKnown RBP13.92□□□□□ -0.18
HDAC6-211ENST00000443563 DDX58O95786 925 aaKnown RBP13.92□□□□□ -0.18
HDAC6-211ENST00000443563 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC6-211ENST00000443563 SLFN5Q08AF3 891 aa13.92□□□□□ -0.18
HDAC6-211ENST00000443563 ARFGEF2Q9Y6D5 1785 aa13.91□□□□□ -0.18
HDAC6-211ENST00000443563 VAMP4O75379 141 aa13.91□□□□□ -0.18
HDAC6-211ENST00000443563 ST5P78524 1137 aa13.91□□□□□ -0.18
HDAC6-211ENST00000443563 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
HDAC6-211ENST00000443563 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-211ENST00000443563 CNBD1Q8NA66 436 aa13.91□□□□□ -0.18
HDAC6-211ENST00000443563 PLBD2Q8NHP8 589 aa13.91□□□□□ -0.18
HDAC6-211ENST00000443563 NYXQ9GZU5 481 aa13.91□□□□□ -0.18
HDAC6-211ENST00000443563 PDZRN3Q9UPQ7 1066 aa13.91□□□□□ -0.18
HDAC6-211ENST00000443563 PARP10Q53GL7 1025 aa13.9□□□□□ -0.18
HDAC6-211ENST00000443563 TPTE2Q6XPS3 522 aa13.9□□□□□ -0.18
HDAC6-211ENST00000443563 NLGN2Q8NFZ4 835 aa13.9□□□□□ -0.18
HDAC6-211ENST00000443563 N4BP2Q86UW6 1770 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-211ENST00000443563 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
HDAC6-211ENST00000443563 IBTKQ9P2D0 1353 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-211ENST00000443563 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
HDAC6-211ENST00000443563 GTF2E1P29083 439 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-211ENST00000443563 PPP1R42Q7Z4L9 355 aa13.89□□□□□ -0.19
HDAC6-211ENST00000443563 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
HDAC6-211ENST00000443563 ZNF34Q8IZ26 560 aa13.89□□□□□ -0.19
HDAC6-211ENST00000443563 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
HDAC6-211ENST00000443563 PXDNLA1KZ92 1463 aa13.88□□□□□ -0.19
HDAC6-211ENST00000443563 CT47B1P0C2W7 299 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-211ENST00000443563 PDE6BP35913 854 aa13.88□□□□□ -0.19
HDAC6-211ENST00000443563 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
HDAC6-211ENST00000443563 PRR5LQ6MZQ0 368 aa13.88□□□□□ -0.19
HDAC6-211ENST00000443563 TRMT2AQ8IZ69 625 aaKnown RBP13.88□□□□□ -0.19
HDAC6-211ENST00000443563 BRIP1Q9BX63 1249 aa13.88□□□□□ -0.19
HDAC6-211ENST00000443563 PHAXQ9H814 394 aaKnown RBP13.88□□□□□ -0.19
HDAC6-211ENST00000443563 RNF123Q5XPI4 1314 aa13.88□□□□□ -0.19
HDAC6-211ENST00000443563 ANKRD31Q8N7Z5 1873 aa13.87□□□□□ -0.19
HDAC6-211ENST00000443563 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
HDAC6-211ENST00000443563 GPTP24298 496 aa13.87□□□□□ -0.19
HDAC6-211ENST00000443563 GPR162Q16538 588 aa13.87□□□□□ -0.19
HDAC6-211ENST00000443563 CDCA7LQ96GN5 454 aa13.87□□□□□ -0.19
HDAC6-211ENST00000443563 BRCA1P38398 1863 aaKnown RBP13.87□□□□□ -0.19
HDAC6-211ENST00000443563 FAM177BA6PVY3 158 aa13.86□□□□□ -0.19
HDAC6-211ENST00000443563 H0YIN7 160 aa13.86□□□□□ -0.19
HDAC6-211ENST00000443563 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
HDAC6-211ENST00000443563 UBN2Q6ZU65 1347 aa13.86□□□□□ -0.19
HDAC6-211ENST00000443563 RIC1Q4ADV7 1423 aa13.85□□□□□ -0.19
HDAC6-211ENST00000443563 A0A0G2JLW4 131 aa13.85□□□□□ -0.19
HDAC6-211ENST00000443563 TCERG1O14776 1098 aaKnown RBP13.85□□□□□ -0.19
HDAC6-211ENST00000443563 DPEP1P16444 411 aa13.85□□□□□ -0.19
HDAC6-211ENST00000443563 FLIIQ13045 1269 aa13.85□□□□□ -0.19
HDAC6-211ENST00000443563 KSR2Q6VAB6 950 aa13.85□□□□□ -0.19
HDAC6-211ENST00000443563 PELP1Q8IZL8 1130 aaKnown RBP13.85□□□□□ -0.19
HDAC6-211ENST00000443563 UTP14AQ9BVJ6 771 aaKnown RBP13.85□□□□□ -0.19
HDAC6-211ENST00000443563 PIM2Q9P1W9 311 aa13.85□□□□□ -0.19
HDAC6-211ENST00000443563 GRIN3BO60391 1043 aa13.84□□□□□ -0.19
HDAC6-211ENST00000443563 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
HDAC6-211ENST00000443563 TRIM28Q13263 835 aaKnown RBP13.84□□□□□ -0.19
HDAC6-211ENST00000443563 SUSD4Q5VX71 490 aa13.84□□□□□ -0.19
HDAC6-211ENST00000443563 NLRP10Q86W26 655 aa13.84□□□□□ -0.19
HDAC6-211ENST00000443563 C2CD5Q86YS7 1000 aa13.84□□□□□ -0.19
HDAC6-211ENST00000443563 ISCA1Q9BUE6 129 aa13.84□□□□□ -0.19
HDAC6-211ENST00000443563 ARFGEF1Q9Y6D6 1849 aa13.84□□□□□ -0.19
HDAC6-211ENST00000443563 UTRNP46939 3433 aa13.83□□□□□ -0.19
HDAC6-211ENST00000443563 PI4KAP2A4QPH2 592 aa13.83□□□□□ -0.2
HDAC6-211ENST00000443563 NTSR2O95665 410 aa13.83□□□□□ -0.2
HDAC6-211ENST00000443563 KCNA3P22001 575 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms