RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 RPIAP49247 311 aa9.79□□□□□ -0.84
R3HDM1-210ENST00000443537 SH3BP2P78314 561 aa9.79□□□□□ -0.84
R3HDM1-210ENST00000443537 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
R3HDM1-210ENST00000443537 DZIP3Q86Y13 1208 aaKnown RBP9.79□□□□□ -0.84
R3HDM1-210ENST00000443537 KIF7Q2M1P5 1343 aa9.79□□□□□ -0.84
R3HDM1-210ENST00000443537 MYOM1P52179 1685 aa9.78□□□□□ -0.84
R3HDM1-210ENST00000443537 OCSTAMPQ9BR26 566 aa9.78□□□□□ -0.84
R3HDM1-210ENST00000443537 CDC42BPGQ6DT37 1551 aa9.78□□□□□ -0.84
R3HDM1-210ENST00000443537 WASHC2AQ641Q2 1341 aa9.78□□□□□ -0.84
R3HDM1-210ENST00000443537 TULP4Q9NRJ4 1543 aa9.77□□□□□ -0.84
R3HDM1-210ENST00000443537 KCNA6P17658 529 aa9.77□□□□□ -0.85
R3HDM1-210ENST00000443537 PRAM1Q96QH2 718 aa9.77□□□□□ -0.85
R3HDM1-210ENST00000443537 SLC26A8Q96RN1 970 aa9.77□□□□□ -0.85
R3HDM1-210ENST00000443537 AMOTL2Q9Y2J4 779 aa9.77□□□□□ -0.85
R3HDM1-210ENST00000443537 PTPRUQ92729 1446 aa9.76□□□□□ -0.85
R3HDM1-210ENST00000443537 WNT7BP56706 349 aa9.76□□□□□ -0.85
R3HDM1-210ENST00000443537 MCCD1P59942 119 aaPredicted RBP9.76□□□□□ -0.85
R3HDM1-210ENST00000443537 SH3RF1Q7Z6J0 888 aa9.76□□□□□ -0.85
R3HDM1-210ENST00000443537 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
R3HDM1-210ENST00000443537 STK26Q9P289 416 aa9.76□□□□□ -0.85
R3HDM1-210ENST00000443537 NALCNQ8IZF0 1738 aa9.76□□□□□ -0.85
R3HDM1-210ENST00000443537 ROBO2Q9HCK4 1378 aa9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 DISP3Q9P2K9 1392 aa9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 USP32Q8NFA0 1604 aa9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 DCCP43146 1447 aa9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 SLC19A1P41440 591 aa9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 ERFEQ4G0M1 354 aa9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 FMN2Q9NZ56 1722 aa9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 KTN1Q86UP2 1357 aaKnown RBP9.75□□□□□ -0.85
R3HDM1-210ENST00000443537 ANKARQ7Z5J8 1434 aa9.74□□□□□ -0.85
R3HDM1-210ENST00000443537 ADGRL3Q9HAR2 1447 aa9.74□□□□□ -0.85
R3HDM1-210ENST00000443537 TOPAZ1Q8N9V7 1692 aa9.74□□□□□ -0.85
R3HDM1-210ENST00000443537 SLFNL1Q499Z3 407 aa9.74□□□□□ -0.85
R3HDM1-210ENST00000443537 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
R3HDM1-210ENST00000443537 DIEXFQ68CQ4 756 aaKnown RBP9.74□□□□□ -0.85
R3HDM1-210ENST00000443537 LIAT1Q6ZQX7 453 aa9.74□□□□□ -0.85
R3HDM1-210ENST00000443537 EHBP1Q8NDI1 1231 aa9.74□□□□□ -0.85
R3HDM1-210ENST00000443537 ATP7BP35670 1465 aa9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 A0A0G2JS52 829 aa9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 HSPA2P54652 639 aa9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 SKOR1P84550 965 aa9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 FAM174AQ8TBP5 190 aa9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 ARXQ96QS3 562 aa9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 HIRIP3Q9BW71 556 aaPredicted RBP9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 PPP1R12CQ9BZL4 782 aa9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 STRCP1A6NGW2 1772 aa9.73□□□□□ -0.85
R3HDM1-210ENST00000443537 RFX1P22670 979 aa9.72□□□□□ -0.85
R3HDM1-210ENST00000443537 VARSP26640 1264 aaKnown RBP9.72□□□□□ -0.85
R3HDM1-210ENST00000443537 UCN2Q96RP3 112 aa9.72□□□□□ -0.85
R3HDM1-210ENST00000443537 CEP126Q9P2H0 1117 aa9.72□□□□□ -0.85
R3HDM1-210ENST00000443537 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
R3HDM1-210ENST00000443537 AKAP12Q02952 1782 aa9.72□□□□□ -0.85
R3HDM1-210ENST00000443537 NPC1L1Q9UHC9 1359 aa9.72□□□□□ -0.85
R3HDM1-210ENST00000443537 PALM3A6NDB9 673 aaPredicted RBP9.71□□□□□ -0.86
R3HDM1-210ENST00000443537 WASLO00401 505 aaPredicted RBP9.71□□□□□ -0.86
R3HDM1-210ENST00000443537 SRPK2P78362 688 aaKnown RBP9.71□□□□□ -0.86
R3HDM1-210ENST00000443537 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
R3HDM1-210ENST00000443537 HOMEZQ8IX15 550 aa9.71□□□□□ -0.86
R3HDM1-210ENST00000443537 ANKRD36BQ8N2N9 1353 aa9.71□□□□□ -0.86
R3HDM1-210ENST00000443537 PLEKHH1Q9ULM0 1364 aa9.71□□□□□ -0.86
R3HDM1-210ENST00000443537 KIF1AQ12756 1690 aa9.71□□□□□ -0.86
R3HDM1-210ENST00000443537 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 PIK3CDO00329 1044 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 SKIP12755 728 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 LMOD1P29536 600 aaPredicted RBP9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 DDX10Q13206 875 aaKnown RBP9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 ARID5BQ14865 1188 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 NBPF20Q3BBV1 942 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 TBC1D9Q6ZT07 1266 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 RNF135Q8IUD6 432 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 C1QTNF2Q9BXJ5 285 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 TERF2IPQ9NYB0 399 aa9.7□□□□□ -0.86
R3HDM1-210ENST00000443537 BRD4O60885 1362 aaPredicted RBP9.69□□□□□ -0.86
R3HDM1-210ENST00000443537 NSD2O96028 1365 aa9.69□□□□□ -0.86
R3HDM1-210ENST00000443537 XIRP1Q702N8 1843 aaKnown RBP9.69□□□□□ -0.86
R3HDM1-210ENST00000443537 WAPLQ7Z5K2 1190 aa9.69□□□□□ -0.86
R3HDM1-210ENST00000443537 EMID1Q96A84 441 aaPredicted RBP9.69□□□□□ -0.86
R3HDM1-210ENST00000443537 CDK19Q9BWU1 502 aa9.69□□□□□ -0.86
R3HDM1-210ENST00000443537 ANKRD26Q9UPS8 1709 aa9.69□□□□□ -0.86
R3HDM1-210ENST00000443537 RGPD8O14715 1765 aaPredicted RBP9.68□□□□□ -0.86
R3HDM1-210ENST00000443537 ATP9BO43861 1147 aa9.68□□□□□ -0.86
R3HDM1-210ENST00000443537 SAFB2Q14151 953 aaKnown RBP eCLIP9.68□□□□□ -0.86
R3HDM1-210ENST00000443537 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
R3HDM1-210ENST00000443537 CDV3Q9UKY7 258 aaKnown RBP9.68□□□□□ -0.86
R3HDM1-210ENST00000443537 KIF20BQ96Q89 1820 aa9.68□□□□□ -0.86
R3HDM1-210ENST00000443537 MSH6P52701 1360 aa9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 ANP32CO43423 234 aa9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 RAB15P59190 212 aa9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 SPRYD7Q5W111 196 aa9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 VASH1Q7L8A9 365 aaPredicted RBP9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 TRMT44Q8IYL2 757 aaKnown RBP9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 POLR3GLQ9BT43 218 aa9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 PRKD2Q9BZL6 878 aa9.67□□□□□ -0.86
R3HDM1-210ENST00000443537 PPIP5K1Q6PFW1 1433 aa9.66□□□□□ -0.86
R3HDM1-210ENST00000443537 ZNF697Q5TEC3 545 aa9.66□□□□□ -0.86
R3HDM1-210ENST00000443537 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms