RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 APBB1O00213 710 aa10.63□□□□□ -0.71
RER1-205ENST00000443438 GRM8O00222 908 aa10.63□□□□□ -0.71
RER1-205ENST00000443438 GCKRQ14397 625 aa10.63□□□□□ -0.71
RER1-205ENST00000443438 BARGINQ6ZT62 677 aa10.63□□□□□ -0.71
RER1-205ENST00000443438 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
RER1-205ENST00000443438 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
RER1-205ENST00000443438 PLBD2Q8NHP8 589 aa10.63□□□□□ -0.71
RER1-205ENST00000443438 DDRGK1Q96HY6 314 aa10.63□□□□□ -0.71
RER1-205ENST00000443438 MYD88Q99836 296 aa10.63□□□□□ -0.71
RER1-205ENST00000443438 NWD2Q9ULI1 1742 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 DCAF8L1A6NGE4 600 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 SRGAP3O43295 1099 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 PTCD1O75127 700 aaKnown RBP10.62□□□□□ -0.71
RER1-205ENST00000443438 RAB11FIP3O75154 756 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 CASP7P55210 303 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 TTLL7Q6ZT98 887 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 SLC4A9Q96Q91 983 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 C9orf78Q9NZ63 289 aaPredicted RBP10.62□□□□□ -0.71
RER1-205ENST00000443438 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
RER1-205ENST00000443438 STAP2Q9UGK3 403 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 COL15A1P39059 1388 aa10.62□□□□□ -0.71
RER1-205ENST00000443438 PDE1AP54750 535 aa10.61□□□□□ -0.71
RER1-205ENST00000443438 EPHA10Q5JZY3 1008 aa10.61□□□□□ -0.71
RER1-205ENST00000443438 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
RER1-205ENST00000443438 TBC1D9Q6ZT07 1266 aa10.61□□□□□ -0.71
RER1-205ENST00000443438 DNAJC10Q8IXB1 793 aa10.61□□□□□ -0.71
RER1-205ENST00000443438 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
RER1-205ENST00000443438 JCADQ9P266 1359 aa10.61□□□□□ -0.71
RER1-205ENST00000443438 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
RER1-205ENST00000443438 ITGB4P16144 1822 aa10.61□□□□□ -0.71
RER1-205ENST00000443438 H7C1W4 665 aa10.6□□□□□ -0.71
RER1-205ENST00000443438 CDC45O75419 566 aa10.6□□□□□ -0.71
RER1-205ENST00000443438 SURF6O75683 361 aaKnown RBP10.6□□□□□ -0.71
RER1-205ENST00000443438 NEXNQ0ZGT2 675 aa10.6□□□□□ -0.71
RER1-205ENST00000443438 UNC5CLQ8IV45 518 aa10.6□□□□□ -0.71
RER1-205ENST00000443438 RHPN1Q8TCX5 695 aa10.6□□□□□ -0.71
RER1-205ENST00000443438 TEX13AQ9BXU3 409 aaPredicted RBP10.6□□□□□ -0.71
RER1-205ENST00000443438 BICC1Q9H694 974 aaKnown RBP10.6□□□□□ -0.71
RER1-205ENST00000443438 HDAC5Q9UQL6 1122 aa10.6□□□□□ -0.71
RER1-205ENST00000443438 ARFGEF2Q9Y6D5 1785 aa10.6□□□□□ -0.71
RER1-205ENST00000443438 NUP188Q5SRE5 1749 aa10.59□□□□□ -0.71
RER1-205ENST00000443438 SDSP20132 328 aa10.59□□□□□ -0.71
RER1-205ENST00000443438 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
RER1-205ENST00000443438 MFAP1P55081 439 aaKnown RBP10.59□□□□□ -0.71
RER1-205ENST00000443438 VPS72Q15906 364 aa10.59□□□□□ -0.71
RER1-205ENST00000443438 DDB1Q16531 1140 aa10.59□□□□□ -0.71
RER1-205ENST00000443438 POTEAQ6S8J7 498 aa10.59□□□□□ -0.71
RER1-205ENST00000443438 FNBP4Q8N3X1 1017 aaPredicted RBP10.59□□□□□ -0.71
RER1-205ENST00000443438 C22orf23Q9BZE7 217 aa10.59□□□□□ -0.71
RER1-205ENST00000443438 AOX1Q06278 1338 aa10.58□□□□□ -0.71
RER1-205ENST00000443438 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
RER1-205ENST00000443438 CYP19A1P11511 503 aaPredicted RBP10.58□□□□□ -0.72
RER1-205ENST00000443438 MX1P20591 662 aa10.58□□□□□ -0.72
RER1-205ENST00000443438 RFX5P48382 616 aaPredicted RBP10.58□□□□□ -0.72
RER1-205ENST00000443438 RBM25P49756 843 aaKnown RBP10.58□□□□□ -0.72
RER1-205ENST00000443438 RABL6Q3YEC7 729 aaPredicted RBP10.58□□□□□ -0.72
RER1-205ENST00000443438 KIF1BPQ96EK5 621 aa10.58□□□□□ -0.72
RER1-205ENST00000443438 ISCA1Q9BUE6 129 aa10.58□□□□□ -0.72
RER1-205ENST00000443438 USP42Q9H9J4 1324 aaKnown RBP10.58□□□□□ -0.72
RER1-205ENST00000443438 SLC4A3P48751 1232 aa10.57□□□□□ -0.72
RER1-205ENST00000443438 HSP90AB4PQ58FF6 505 aa10.57□□□□□ -0.72
RER1-205ENST00000443438 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
RER1-205ENST00000443438 UPF2Q9HAU5 1272 aaKnown RBP10.57□□□□□ -0.72
RER1-205ENST00000443438 IL1RAPL2Q9NP60 686 aa10.57□□□□□ -0.72
RER1-205ENST00000443438 PA2G4Q9UQ80 394 aaKnown RBP10.57□□□□□ -0.72
RER1-205ENST00000443438 TUBGCP6Q96RT7 1819 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 TJP1Q07157 1748 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 DOT1LQ8TEK3 1739 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.56□□□□□ -0.72
RER1-205ENST00000443438 SASH1O94885 1247 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 STARD3NLO95772 234 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 FOXO4P98177 505 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 TRIM28Q13263 835 aaKnown RBP10.56□□□□□ -0.72
RER1-205ENST00000443438 TSHZ3Q63HK5 1081 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 NUTM1Q86Y26 1132 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 PI4K2BQ8TCG2 481 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 KIF2CQ99661 725 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
RER1-205ENST00000443438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.56□□□□□ -0.72
RER1-205ENST00000443438 SPATA31A6Q5VVP1 1343 aa10.56□□□□□ -0.72
RER1-205ENST00000443438 A0A087WZG4 1122 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 UBE3BQ7Z3V4 1068 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 CCDC191Q8NCU4 936 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 NGLY1Q96IV0 654 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 ANP32EQ9BTT0 268 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 BCL11AQ9H165 835 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 ZBTB3Q9H5J0 574 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 COPRSQ9NQ92 184 aa10.55□□□□□ -0.72
RER1-205ENST00000443438 CWC25Q9NXE8 425 aaPredicted RBP10.55□□□□□ -0.72
RER1-205ENST00000443438 PTPN12Q05209 780 aaKnown RBP10.54□□□□□ -0.72
RER1-205ENST00000443438 ERC1Q8IUD2 1116 aa10.54□□□□□ -0.72
RER1-205ENST00000443438 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.72
RER1-205ENST00000443438 ACSBG1Q96GR2 724 aa10.54□□□□□ -0.72
RER1-205ENST00000443438 C8orf37Q96NL8 207 aa10.54□□□□□ -0.72
RER1-205ENST00000443438 AFDNP55196 1824 aaKnown RBP10.54□□□□□ -0.72
RER1-205ENST00000443438 FAM98CQ17RN3 349 aaKnown RBP10.53□□□□□ -0.72
RER1-205ENST00000443438 INTS5Q6P9B9 1019 aaKnown RBP10.53□□□□□ -0.72
RER1-205ENST00000443438 KLHDC4Q8TBB5 520 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms