RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SF3A1Q15459 793 aaKnown RBP12.7□□□□□ -0.38
CALD1-210ENST00000443197 DDB1Q16531 1140 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 BLOC1S2Q6QNY1 142 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 ATP6V1DQ9Y5K8 247 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 LMTK3Q96Q04 1460 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 SPATA31D1Q6ZQQ2 1576 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 ESYT1Q9BSJ8 1104 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 CD163L1Q9NR16 1453 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 SUCLG2Q96I99 432 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
CALD1-210ENST00000443197 DTNBO60941 627 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 NFXL1Q6ZNB6 911 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 NDUFB9Q9Y6M9 179 aa12.69□□□□□ -0.38
CALD1-210ENST00000443197 RRP12Q5JTH9 1297 aaKnown RBP12.68□□□□□ -0.38
CALD1-210ENST00000443197 RNF214Q8ND24 703 aa12.68□□□□□ -0.38
CALD1-210ENST00000443197 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
CALD1-210ENST00000443197 TNPO1Q92973 898 aaKnown RBP12.68□□□□□ -0.38
CALD1-210ENST00000443197 FBXW7Q969H0 707 aa12.68□□□□□ -0.38
CALD1-210ENST00000443197 HOXB7P09629 217 aa12.68□□□□□ -0.38
CALD1-210ENST00000443197 BRINP3Q76B58 766 aa12.68□□□□□ -0.38
CALD1-210ENST00000443197 CCDC83Q8IWF9 413 aa12.68□□□□□ -0.38
CALD1-210ENST00000443197 DRC7Q8IY82 874 aa12.68□□□□□ -0.38
CALD1-210ENST00000443197 NAP1L5Q96NT1 182 aaPredicted RBP12.68□□□□□ -0.38
CALD1-210ENST00000443197 MED14O60244 1454 aa12.68□□□□□ -0.38
CALD1-210ENST00000443197 SIGLEC1Q9BZZ2 1709 aa12.67□□□□□ -0.38
CALD1-210ENST00000443197 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
CALD1-210ENST00000443197 TMX4Q9H1E5 349 aaPredicted RBP12.67□□□□□ -0.38
CALD1-210ENST00000443197 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
CALD1-210ENST00000443197 DNAJC10Q8IXB1 793 aa12.67□□□□□ -0.38
CALD1-210ENST00000443197 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
CALD1-210ENST00000443197 KIF3AQ9Y496 699 aa12.67□□□□□ -0.38
CALD1-210ENST00000443197 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
CALD1-210ENST00000443197 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
CALD1-210ENST00000443197 FERMT3Q86UX7 667 aa12.67□□□□□ -0.38
CALD1-210ENST00000443197 ABCF2Q9UG63 623 aa12.67□□□□□ -0.38
CALD1-210ENST00000443197 TOM1O60784 492 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 TIMM10P62072 90 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 BEND3Q5T5X7 828 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 ANKARQ7Z5J8 1434 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 PRIM1P49642 420 aaKnown RBP12.66□□□□□ -0.38
CALD1-210ENST00000443197 TFCP2Q12800 502 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 ADGRL3Q9HAR2 1447 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 MSNP26038 577 aaKnown RBP12.66□□□□□ -0.38
CALD1-210ENST00000443197 CHMLP26374 656 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 ZNF594Q96JF6 807 aaPredicted RBP12.66□□□□□ -0.38
CALD1-210ENST00000443197 METTL22Q9BUU2 404 aaPredicted RBP12.66□□□□□ -0.38
CALD1-210ENST00000443197 MTMR7Q9Y216 660 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 MYO5BQ9ULV0 1848 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 ARHGEF28Q8N1W1 1705 aaKnown RBP12.66□□□□□ -0.38
CALD1-210ENST00000443197 DDX11Q96FC9 970 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 USP26Q9BXU7 913 aa12.66□□□□□ -0.38
CALD1-210ENST00000443197 CWC22Q9HCG8 908 aaKnown RBP12.66□□□□□ -0.38
CALD1-210ENST00000443197 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
CALD1-210ENST00000443197 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.38
CALD1-210ENST00000443197 TTLL7Q6ZT98 887 aa12.65□□□□□ -0.38
CALD1-210ENST00000443197 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
CALD1-210ENST00000443197 BICD2Q8TD16 824 aa12.65□□□□□ -0.38
CALD1-210ENST00000443197 CHMP4CQ96CF2 233 aa12.65□□□□□ -0.38
CALD1-210ENST00000443197 TEX13AQ9BXU3 409 aaPredicted RBP12.65□□□□□ -0.38
CALD1-210ENST00000443197 CPA1P15085 419 aa12.65□□□□□ -0.38
CALD1-210ENST00000443197 GCKRQ14397 625 aa12.65□□□□□ -0.38
CALD1-210ENST00000443197 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.38
CALD1-210ENST00000443197 SYNE3Q6ZMZ3 975 aa12.65□□□□□ -0.38
CALD1-210ENST00000443197 LARP1BQ659C4 914 aaKnown RBP12.64□□□□□ -0.39
CALD1-210ENST00000443197 NEURL4Q96JN8 1562 aa12.64□□□□□ -0.39
CALD1-210ENST00000443197 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
CALD1-210ENST00000443197 OVOS2A0A0J9YW53 1432 aa12.64□□□□□ -0.39
CALD1-210ENST00000443197 OVOS2Q6IE36 1432 aa12.64□□□□□ -0.39
CALD1-210ENST00000443197 ANKRD18BA2A2Z9 1011 aa12.64□□□□□ -0.39
CALD1-210ENST00000443197 CYP27B1O15528 508 aa12.64□□□□□ -0.39
CALD1-210ENST00000443197 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
CALD1-210ENST00000443197 IQSEC3Q9UPP2 1182 aaPredicted RBP12.64□□□□□ -0.39
CALD1-210ENST00000443197 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
CALD1-210ENST00000443197 IGHMBP2P38935 993 aaKnown RBP12.63□□□□□ -0.39
CALD1-210ENST00000443197 ZGPATQ8N5A5 531 aaKnown RBP12.63□□□□□ -0.39
CALD1-210ENST00000443197 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
CALD1-210ENST00000443197 TMX3Q96JJ7 454 aa12.63□□□□□ -0.39
CALD1-210ENST00000443197 PHF14O94880 888 aa12.63□□□□□ -0.39
CALD1-210ENST00000443197 HAND2P61296 217 aa12.63□□□□□ -0.39
CALD1-210ENST00000443197 CPLX2Q6PUV4 134 aaKnown RBP12.63□□□□□ -0.39
CALD1-210ENST00000443197 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.39
CALD1-210ENST00000443197 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
CALD1-210ENST00000443197 LRRC2Q9BYS8 371 aa12.63□□□□□ -0.39
CALD1-210ENST00000443197 ASAP1Q9ULH1 1129 aa12.63□□□□□ -0.39
CALD1-210ENST00000443197 AKAP2Q9Y2D5 859 aa12.63□□□□□ -0.39
CALD1-210ENST00000443197 TECPR2O15040 1411 aa12.63□□□□□ -0.39
CALD1-210ENST00000443197 NEURL1BA8MQ27 555 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 PLBD2Q8NHP8 589 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 LRP2BPQ9P2M1 347 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 SSH3Q8TE77 659 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
CALD1-210ENST00000443197 IL27Q8NEV9 243 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms