RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 USP42Q9H9J4 1324 aaKnown RBP10.72□□□□□ -0.69
SSXP3-201ENST00000442971 A0A1W2PPC1 479 aa10.72□□□□□ -0.69
SSXP3-201ENST00000442971 LMOD1P29536 600 aaPredicted RBP10.72□□□□□ -0.69
SSXP3-201ENST00000442971 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
SSXP3-201ENST00000442971 RGMBQ6NW40 437 aa10.72□□□□□ -0.69
SSXP3-201ENST00000442971 USP50Q70EL3 339 aaPredicted RBP10.72□□□□□ -0.69
SSXP3-201ENST00000442971 Q7L0L9 218 aa10.72□□□□□ -0.69
SSXP3-201ENST00000442971 CCDC102AQ96A19 550 aa10.72□□□□□ -0.69
SSXP3-201ENST00000442971 ASAP1Q9ULH1 1129 aa10.72□□□□□ -0.69
SSXP3-201ENST00000442971 TMEM265A0A087WTH1 108 aa10.71□□□□□ -0.69
SSXP3-201ENST00000442971 PPEF1O14829 653 aaPredicted RBP10.71□□□□□ -0.69
SSXP3-201ENST00000442971 MAP3K12Q12852 859 aa10.71□□□□□ -0.69
SSXP3-201ENST00000442971 MTMR10Q9NXD2 777 aa10.71□□□□□ -0.69
SSXP3-201ENST00000442971 CGNL1Q0VF96 1302 aa10.7□□□□□ -0.7
SSXP3-201ENST00000442971 PCDH11XQ9BZA7 1347 aa10.7□□□□□ -0.7
SSXP3-201ENST00000442971 PCDH11YQ9BZA8 1340 aa10.7□□□□□ -0.7
SSXP3-201ENST00000442971 CNTNAP4Q9C0A0 1308 aa10.7□□□□□ -0.7
SSXP3-201ENST00000442971 EPS15P42566 896 aa10.7□□□□□ -0.7
SSXP3-201ENST00000442971 GLIS2Q9BZE0 524 aaPredicted RBP10.7□□□□□ -0.7
SSXP3-201ENST00000442971 NRXN2Q9P2S2 1712 aa10.7□□□□□ -0.7
SSXP3-201ENST00000442971 FZD9O00144 591 aa10.69□□□□□ -0.7
SSXP3-201ENST00000442971 CD163L1Q9NR16 1453 aa10.69□□□□□ -0.7
SSXP3-201ENST00000442971 TBC1D8O95759 1140 aa10.68□□□□□ -0.7
SSXP3-201ENST00000442971 SOGA3Q5TF21 947 aa10.68□□□□□ -0.7
SSXP3-201ENST00000442971 RGPD2P0DJD1 1756 aa10.68□□□□□ -0.7
SSXP3-201ENST00000442971 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
SSXP3-201ENST00000442971 ZNF157P51786 506 aaPredicted RBP10.67□□□□□ -0.7
SSXP3-201ENST00000442971 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
SSXP3-201ENST00000442971 IP6K1Q92551 441 aa10.67□□□□□ -0.7
SSXP3-201ENST00000442971 SYMPKQ92797 1274 aaKnown RBP10.67□□□□□ -0.7
SSXP3-201ENST00000442971 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
SSXP3-201ENST00000442971 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
SSXP3-201ENST00000442971 MAP3K19Q56UN5 1328 aa10.67□□□□□ -0.7
SSXP3-201ENST00000442971 CARMIL3Q8ND23 1372 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 SLX4Q8IY92 1834 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 GPR25O00155 361 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 CYP27B1O15528 508 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 SERPINB2P05120 415 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 SCNN1DP51172 638 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 RAPGEF4Q8WZA2 1011 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 DPF3Q92784 378 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 ZNF277Q9NRM2 450 aaPredicted RBP10.66□□□□□ -0.7
SSXP3-201ENST00000442971 GJA3Q9Y6H8 435 aa10.66□□□□□ -0.7
SSXP3-201ENST00000442971 LAMA2P24043 3122 aaKnown RBP10.66□□□□□ -0.7
SSXP3-201ENST00000442971 KDRP35968 1356 aa10.65□□□□□ -0.7
SSXP3-201ENST00000442971 TNFRSF10AO00220 468 aa10.65□□□□□ -0.7
SSXP3-201ENST00000442971 NFIXQ14938 502 aa10.65□□□□□ -0.7
SSXP3-201ENST00000442971 NOM1Q5C9Z4 860 aaKnown RBP10.65□□□□□ -0.7
SSXP3-201ENST00000442971 SLC4A9Q96Q91 983 aa10.65□□□□□ -0.7
SSXP3-201ENST00000442971 TMEM106CQ9BVX2 250 aa10.65□□□□□ -0.7
SSXP3-201ENST00000442971 ATG3Q9NT62 314 aa10.65□□□□□ -0.7
SSXP3-201ENST00000442971 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.7
SSXP3-201ENST00000442971 CACNA1SQ13698 1873 aa10.65□□□□□ -0.71
SSXP3-201ENST00000442971 TATP17735 454 aaPredicted RBP10.64□□□□□ -0.71
SSXP3-201ENST00000442971 PDZRN3Q9UPQ7 1066 aa10.64□□□□□ -0.71
SSXP3-201ENST00000442971 ZNF831Q5JPB2 1677 aa10.64□□□□□ -0.71
SSXP3-201ENST00000442971 FKTNO75072 461 aa10.63□□□□□ -0.71
SSXP3-201ENST00000442971 SLC10A3P09131 477 aa10.63□□□□□ -0.71
SSXP3-201ENST00000442971 FKBP4Q02790 459 aaKnown RBP eCLIP10.63□□□□□ -0.71
SSXP3-201ENST00000442971 ARIH1Q9Y4X5 557 aaPredicted RBP10.63□□□□□ -0.71
SSXP3-201ENST00000442971 BCORQ6W2J9 1755 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 ZPR1O75312 459 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 PDE6BP35913 854 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 USPL1Q5W0Q7 1092 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 PRPF40BQ6NWY9 871 aaKnown RBP10.62□□□□□ -0.71
SSXP3-201ENST00000442971 CNKSR1Q969H4 720 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 ARMC5Q96C12 935 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 RPTORQ8N122 1335 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 ANKRD31Q8N7Z5 1873 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 COL11A2P13942 1736 aaPredicted RBP10.62□□□□□ -0.71
SSXP3-201ENST00000442971 EYSQ5T1H1 3165 aa10.62□□□□□ -0.71
SSXP3-201ENST00000442971 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
SSXP3-201ENST00000442971 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
SSXP3-201ENST00000442971 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
SSXP3-201ENST00000442971 POTEHQ6S545 545 aa10.61□□□□□ -0.71
SSXP3-201ENST00000442971 CDC37L1Q7L3B6 337 aa10.61□□□□□ -0.71
SSXP3-201ENST00000442971 ADARB2Q9NS39 739 aaKnown RBP10.61□□□□□ -0.71
SSXP3-201ENST00000442971 PGAP2Q9UHJ9 254 aa10.61□□□□□ -0.71
SSXP3-201ENST00000442971 TRIM17Q9Y577 477 aa10.61□□□□□ -0.71
SSXP3-201ENST00000442971 IARSP41252 1262 aaKnown RBP10.6□□□□□ -0.71
SSXP3-201ENST00000442971 EIF6P56537 245 aaKnown RBP10.6□□□□□ -0.71
SSXP3-201ENST00000442971 NKX1-1Q15270 411 aaPredicted RBP10.6□□□□□ -0.71
SSXP3-201ENST00000442971 CCDC93Q567U6 631 aa10.6□□□□□ -0.71
SSXP3-201ENST00000442971 ALYREFQ86V81 257 aaKnown RBP10.6□□□□□ -0.71
SSXP3-201ENST00000442971 USHBP1Q8N6Y0 703 aa10.6□□□□□ -0.71
SSXP3-201ENST00000442971 PRUNE2Q8WUY3 3088 aa10.6□□□□□ -0.71
SSXP3-201ENST00000442971 NBPF6Q5VWK0 638 aa10.59□□□□□ -0.71
SSXP3-201ENST00000442971 OTOP1Q7RTM1 612 aa10.59□□□□□ -0.71
SSXP3-201ENST00000442971 C2orf69Q8N8R5 385 aa10.59□□□□□ -0.71
SSXP3-201ENST00000442971 JDP2Q8WYK2 163 aa10.59□□□□□ -0.71
SSXP3-201ENST00000442971 NBPF4Q96M43 638 aa10.59□□□□□ -0.71
SSXP3-201ENST00000442971 BRIP1Q9BX63 1249 aa10.59□□□□□ -0.71
SSXP3-201ENST00000442971 GBA2Q9HCG7 927 aaPredicted RBP10.59□□□□□ -0.71
SSXP3-201ENST00000442971 MON2Q7Z3U7 1717 aa10.59□□□□□ -0.71
SSXP3-201ENST00000442971 ARFGEF2Q9Y6D5 1785 aa10.59□□□□□ -0.71
SSXP3-201ENST00000442971 CRKLP46109 303 aaKnown RBP10.58□□□□□ -0.71
SSXP3-201ENST00000442971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.71
SSXP3-201ENST00000442971 C7orf43Q8WVR3 580 aa10.58□□□□□ -0.71
SSXP3-201ENST00000442971 STYK1Q6J9G0 422 aa10.58□□□□□ -0.72
SSXP3-201ENST00000442971 ZC3H15Q8WU90 426 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms