RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 HLFQ16534 295 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 KRT24Q2M2I5 525 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 TTLL7Q6ZT98 887 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 LRP10Q7Z4F1 713 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 C2CD5Q86YS7 1000 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 CCDC24Q8N4L8 307 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 CFAP44Q96MT7 982 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 BRIP1Q9BX63 1249 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 MRS2Q9HD23 443 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 MAP3K15Q6ZN16 1313 aa28.9■■■□□ 2.22
HDLBP-220ENST00000442730 ATP10DQ9P241 1426 aa28.89■■■□□ 2.22
HDLBP-220ENST00000442730 EIF2S2P20042 333 aaKnown RBP28.89■■■□□ 2.22
HDLBP-220ENST00000442730 PDIA6Q15084 440 aa28.89■■■□□ 2.22
HDLBP-220ENST00000442730 KIF6Q6ZMV9 814 aa28.89■■■□□ 2.22
HDLBP-220ENST00000442730 NIP7Q9Y221 180 aaKnown RBP eCLIP28.89■■■□□ 2.22
HDLBP-220ENST00000442730 ERVV-1B6SEH8 477 aa28.88■■■□□ 2.21
HDLBP-220ENST00000442730 NBPF5PQ86XG9 351 aaPredicted RBP28.88■■■□□ 2.21
HDLBP-220ENST00000442730 H0YIN7 160 aa28.87■■■□□ 2.21
HDLBP-220ENST00000442730 PDE6BP35913 854 aa28.87■■■□□ 2.21
HDLBP-220ENST00000442730 ST5P78524 1137 aa28.87■■■□□ 2.21
HDLBP-220ENST00000442730 PROSER3Q2NL68 480 aa28.87■■■□□ 2.21
HDLBP-220ENST00000442730 ARHGAP27Q6ZUM4 889 aa28.87■■■□□ 2.21
HDLBP-220ENST00000442730 ZNF853P0CG23 659 aa28.86■■■□□ 2.21
HDLBP-220ENST00000442730 MBIPQ9NS73 344 aa28.86■■■□□ 2.21
HDLBP-220ENST00000442730 NPHP1O15259 732 aa28.85■■■□□ 2.21
HDLBP-220ENST00000442730 IFT57Q9NWB7 429 aa28.85■■■□□ 2.21
HDLBP-220ENST00000442730 CALD1Q05682 793 aaKnown RBP28.84■■■□□ 2.21
HDLBP-220ENST00000442730 ZBTB3Q9H5J0 574 aa28.84■■■□□ 2.21
HDLBP-220ENST00000442730 PDZRN3Q9UPQ7 1066 aa28.84■■■□□ 2.21
HDLBP-220ENST00000442730 NUP98P52948 1817 aa28.83■■■□□ 2.21
HDLBP-220ENST00000442730 ANXA1P04083 346 aa28.83■■■□□ 2.21
HDLBP-220ENST00000442730 HOXB7P09629 217 aa28.83■■■□□ 2.21
HDLBP-220ENST00000442730 TTLL6Q8N841 843 aa28.83■■■□□ 2.21
HDLBP-220ENST00000442730 NECTIN2Q92692 538 aa28.83■■■□□ 2.21
HDLBP-220ENST00000442730 GNAI1P63096 354 aa28.8■■■□□ 2.2
HDLBP-220ENST00000442730 TPTE2Q6XPS3 522 aa28.8■■■□□ 2.2
HDLBP-220ENST00000442730 IBTKQ9P2D0 1353 aaPredicted RBP28.79■■■□□ 2.2
HDLBP-220ENST00000442730 UBN2Q6ZU65 1347 aa28.79■■■□□ 2.2
HDLBP-220ENST00000442730 FAM177BA6PVY3 158 aa28.79■■■□□ 2.2
HDLBP-220ENST00000442730 HDGFL1Q5TGJ6 251 aa28.79■■■□□ 2.2
HDLBP-220ENST00000442730 DUSP27Q5VZP5 1158 aa28.78■■■□□ 2.2
HDLBP-220ENST00000442730 GIGYF2Q6Y7W6 1299 aaKnown RBP28.78■■■□□ 2.2
HDLBP-220ENST00000442730 ZNF622Q969S3 477 aaKnown RBP eCLIP28.78■■■□□ 2.2
HDLBP-220ENST00000442730 DDX21Q9NR30 783 aaKnown RBP eCLIP28.78■■■□□ 2.2
HDLBP-220ENST00000442730 CHPF2Q9P2E5 772 aa28.78■■■□□ 2.2
HDLBP-220ENST00000442730 ABCC12Q96J65 1359 aa28.77■■■□□ 2.2
HDLBP-220ENST00000442730 TNRC6CQ9HCJ0 1690 aaKnown RBP28.77■■■□□ 2.2
HDLBP-220ENST00000442730 SENP3-EIF4A1A0A087X0R7 540 aa28.77■■■□□ 2.2
HDLBP-220ENST00000442730 SRGNP10124 158 aa28.77■■■□□ 2.2
HDLBP-220ENST00000442730 GPTP24298 496 aa28.77■■■□□ 2.2
HDLBP-220ENST00000442730 CCDC27Q2M243 656 aa28.77■■■□□ 2.2
HDLBP-220ENST00000442730 STYK1Q6J9G0 422 aa28.76■■■□□ 2.19
HDLBP-220ENST00000442730 ZNF34Q8IZ26 560 aa28.76■■■□□ 2.19
HDLBP-220ENST00000442730 XAGE3Q8WTP9 111 aa28.76■■■□□ 2.19
HDLBP-220ENST00000442730 KLRG2A4D1S0 409 aaPredicted RBP28.75■■■□□ 2.19
HDLBP-220ENST00000442730 COPS6Q7L5N1 327 aa28.75■■■□□ 2.19
HDLBP-220ENST00000442730 NYXQ9GZU5 481 aa28.75■■■□□ 2.19
HDLBP-220ENST00000442730 ARFGEF2Q9Y6D5 1785 aa28.75■■■□□ 2.19
HDLBP-220ENST00000442730 C9orf131Q5VYM1 1079 aa28.74■■■□□ 2.19
HDLBP-220ENST00000442730 MASTLQ96GX5 879 aa28.74■■■□□ 2.19
HDLBP-220ENST00000442730 WWC1Q8IX03 1113 aa28.73■■■□□ 2.19
HDLBP-220ENST00000442730 RIC1Q4ADV7 1423 aa28.72■■■□□ 2.19
HDLBP-220ENST00000442730 RASSF7Q02833 373 aa28.72■■■□□ 2.19
HDLBP-220ENST00000442730 AIMP1Q12904 312 aaKnown RBP28.72■■■□□ 2.19
HDLBP-220ENST00000442730 NCBP3Q53F19 620 aaKnown RBP28.72■■■□□ 2.19
HDLBP-220ENST00000442730 NUTM1Q86Y26 1132 aa28.72■■■□□ 2.19
HDLBP-220ENST00000442730 ZNF526Q8TF50 670 aaPredicted RBP28.72■■■□□ 2.19
HDLBP-220ENST00000442730 CNKSR1Q969H4 720 aa28.72■■■□□ 2.19
HDLBP-220ENST00000442730 DBF4Q9UBU7 674 aaPredicted RBP28.72■■■□□ 2.19
HDLBP-220ENST00000442730 ANKRD36CQ5JPF3 1778 aa28.72■■■□□ 2.19
HDLBP-220ENST00000442730 GTF2E1P29083 439 aaPredicted RBP28.71■■■□□ 2.19
HDLBP-220ENST00000442730 SUSD4Q5VX71 490 aa28.71■■■□□ 2.19
HDLBP-220ENST00000442730 PRPF40BQ6NWY9 871 aaKnown RBP28.71■■■□□ 2.19
HDLBP-220ENST00000442730 GPBP1L1Q9HC44 474 aaPredicted RBP28.71■■■□□ 2.19
HDLBP-220ENST00000442730 NTSR2O95665 410 aa28.7■■■□□ 2.18
HDLBP-220ENST00000442730 ERFEQ4G0M1 354 aa28.7■■■□□ 2.18
HDLBP-220ENST00000442730 SLX4Q8IY92 1834 aa28.7■■■□□ 2.18
HDLBP-220ENST00000442730 NFKBIEO00221 500 aa28.69■■■□□ 2.18
HDLBP-220ENST00000442730 NPR1P16066 1061 aa28.69■■■□□ 2.18
HDLBP-220ENST00000442730 PARP10Q53GL7 1025 aa28.69■■■□□ 2.18
HDLBP-220ENST00000442730 C8orf58Q8NAV2 365 aa28.69■■■□□ 2.18
HDLBP-220ENST00000442730 RNF181Q9P0P0 153 aa28.69■■■□□ 2.18
HDLBP-220ENST00000442730 SBF1O95248 1867 aa28.69■■■□□ 2.18
HDLBP-220ENST00000442730 CACNA1SQ13698 1873 aa28.69■■■□□ 2.18
HDLBP-220ENST00000442730 C21orf2O43822 256 aa28.68■■■□□ 2.18
HDLBP-220ENST00000442730 ELL2O00472 640 aaPredicted RBP28.67■■■□□ 2.18
HDLBP-220ENST00000442730 PRELPP51888 382 aa28.67■■■□□ 2.18
HDLBP-220ENST00000442730 CRY2Q49AN0 593 aa28.67■■■□□ 2.18
HDLBP-220ENST00000442730 HSP90AB3PQ58FF7 597 aa28.67■■■□□ 2.18
HDLBP-220ENST00000442730 TSR2Q969E8 191 aaKnown RBP28.67■■■□□ 2.18
HDLBP-220ENST00000442730 HYPKQ9NX55 129 aa28.67■■■□□ 2.18
HDLBP-220ENST00000442730 ZNF219Q9P2Y4 722 aaPredicted RBP28.67■■■□□ 2.18
HDLBP-220ENST00000442730 IL16Q14005 1332 aa28.67■■■□□ 2.18
HDLBP-220ENST00000442730 PPP1R42Q7Z4L9 355 aa28.65■■■□□ 2.18
HDLBP-220ENST00000442730 FER1L6Q2WGJ9 1857 aa28.65■■■□□ 2.18
HDLBP-220ENST00000442730 LMNB1P20700 586 aa28.64■■■□□ 2.18
HDLBP-220ENST00000442730 FAM9BQ8IZU0 186 aa28.64■■■□□ 2.18
HDLBP-220ENST00000442730 PLBD2Q8NHP8 589 aa28.64■■■□□ 2.18
HDLBP-220ENST00000442730 C1QTNF8P60827 252 aa28.63■■■□□ 2.17
HDLBP-220ENST00000442730 TCIRG1Q13488 830 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms