RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 FMR1Q06787 632 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC6-210ENST00000441703 CCDC93Q567U6 631 aa8.76□□□□□ -1.01
HDAC6-210ENST00000441703 PRPF40BQ6NWY9 871 aaKnown RBP8.76□□□□□ -1.01
HDAC6-210ENST00000441703 BRIP1Q9BX63 1249 aa8.76□□□□□ -1.01
HDAC6-210ENST00000441703 CACNA1SQ13698 1873 aa8.76□□□□□ -1.01
HDAC6-210ENST00000441703 SOS1Q07889 1333 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-210ENST00000441703 COL15A1P39059 1388 aa8.75□□□□□ -1.01
HDAC6-210ENST00000441703 TRAF5O00463 557 aa8.75□□□□□ -1.01
HDAC6-210ENST00000441703 CST9Q5W186 159 aa8.75□□□□□ -1.01
HDAC6-210ENST00000441703 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
HDAC6-210ENST00000441703 GPC2Q8N158 579 aa8.75□□□□□ -1.01
HDAC6-210ENST00000441703 ZNF277Q9NRM2 450 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-210ENST00000441703 GJA3Q9Y6H8 435 aa8.75□□□□□ -1.01
HDAC6-210ENST00000441703 TJP1Q07157 1748 aa8.74□□□□□ -1.01
HDAC6-210ENST00000441703 FYB1O15117 783 aa8.74□□□□□ -1.01
HDAC6-210ENST00000441703 CELF2O95319 508 aaKnown RBP8.74□□□□□ -1.01
HDAC6-210ENST00000441703 EIF6P56537 245 aaKnown RBP8.74□□□□□ -1.01
HDAC6-210ENST00000441703 FKBP4Q02790 459 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDAC6-210ENST00000441703 NOGQ13253 232 aa8.74□□□□□ -1.01
HDAC6-210ENST00000441703 STYK1Q6J9G0 422 aa8.74□□□□□ -1.01
HDAC6-210ENST00000441703 CTU1Q7Z7A3 348 aaKnown RBP8.74□□□□□ -1.01
HDAC6-210ENST00000441703 SAPCD2Q86UD0 394 aa8.74□□□□□ -1.01
HDAC6-210ENST00000441703 HHIPL1Q96JK4 782 aa8.74□□□□□ -1.01
HDAC6-210ENST00000441703 FANCIQ9NVI1 1328 aa8.74□□□□□ -1.01
HDAC6-210ENST00000441703 COL11A2P13942 1736 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-210ENST00000441703 SLX4Q8IY92 1834 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 ST5P78524 1137 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 AKAP4Q5JQC9 854 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 CCDC24Q8N4L8 307 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 JDP2Q8WYK2 163 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 MASTLQ96GX5 879 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 EYA1Q99502 592 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 ZNF408Q9H9D4 720 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 SAGE1Q9NXZ1 904 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 EMILIN1Q9Y6C2 1016 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 WASHC2AQ641Q2 1341 aa8.73□□□□□ -1.01
HDAC6-210ENST00000441703 ANKRD31Q8N7Z5 1873 aa8.72□□□□□ -1.01
HDAC6-210ENST00000441703 ST20-MTHFSA0A0A6YYL1 179 aa8.72□□□□□ -1.01
HDAC6-210ENST00000441703 SLC24A1O60721 1099 aa8.72□□□□□ -1.01
HDAC6-210ENST00000441703 IARSP41252 1262 aaKnown RBP8.72□□□□□ -1.01
HDAC6-210ENST00000441703 MTHFSP49914 203 aa8.72□□□□□ -1.01
HDAC6-210ENST00000441703 FXR1P51114 621 aaKnown RBP eCLIP8.72□□□□□ -1.01
HDAC6-210ENST00000441703 PLEKHO1Q53GL0 409 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-210ENST00000441703 PRR5LQ6MZQ0 368 aa8.72□□□□□ -1.01
HDAC6-210ENST00000441703 ZNF530Q6P9A1 599 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-210ENST00000441703 USP50Q70EL3 339 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-210ENST00000441703 TESK2Q96S53 571 aa8.72□□□□□ -1.01
HDAC6-210ENST00000441703 SIN3AQ96ST3 1273 aa8.72□□□□□ -1.01
HDAC6-210ENST00000441703 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
HDAC6-210ENST00000441703 ARFGEF2Q9Y6D5 1785 aa8.71□□□□□ -1.01
HDAC6-210ENST00000441703 FZD9O00144 591 aa8.71□□□□□ -1.02
HDAC6-210ENST00000441703 C1orf141Q5JVX7 400 aa8.71□□□□□ -1.02
HDAC6-210ENST00000441703 RTKN2Q8IZC4 609 aa8.71□□□□□ -1.02
HDAC6-210ENST00000441703 CNBD1Q8NA66 436 aa8.71□□□□□ -1.02
HDAC6-210ENST00000441703 SLC17A8Q8NDX2 589 aa8.71□□□□□ -1.02
HDAC6-210ENST00000441703 ZBTB1Q9Y2K1 713 aa8.71□□□□□ -1.02
HDAC6-210ENST00000441703 A0A087WZG4 1122 aa8.7□□□□□ -1.02
HDAC6-210ENST00000441703 SRGNP10124 158 aa8.7□□□□□ -1.02
HDAC6-210ENST00000441703 EPS15P42566 896 aa8.7□□□□□ -1.02
HDAC6-210ENST00000441703 PKN2Q16513 984 aaKnown RBP8.7□□□□□ -1.02
HDAC6-210ENST00000441703 TBC1D9BQ66K14 1250 aa8.7□□□□□ -1.02
HDAC6-210ENST00000441703 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
HDAC6-210ENST00000441703 HDAC9Q9UKV0 1011 aa8.7□□□□□ -1.02
HDAC6-210ENST00000441703 TRPA1O75762 1119 aa8.69□□□□□ -1.02
HDAC6-210ENST00000441703 CYP19A1P11511 503 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-210ENST00000441703 CANXP27824 592 aaKnown RBP8.69□□□□□ -1.02
HDAC6-210ENST00000441703 HUNKP57058 714 aa8.69□□□□□ -1.02
HDAC6-210ENST00000441703 SYNE4Q8N205 404 aa8.69□□□□□ -1.02
HDAC6-210ENST00000441703 SCN11AQ9UI33 1791 aa8.68□□□□□ -1.02
HDAC6-210ENST00000441703 AMOTQ4VCS5 1084 aa8.68□□□□□ -1.02
HDAC6-210ENST00000441703 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
HDAC6-210ENST00000441703 ZIC5Q96T25 663 aa8.68□□□□□ -1.02
HDAC6-210ENST00000441703 SETDB2Q96T68 719 aa8.68□□□□□ -1.02
HDAC6-210ENST00000441703 GLIS2Q9BZE0 524 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-210ENST00000441703 ADARB2Q9NS39 739 aaKnown RBP8.68□□□□□ -1.02
HDAC6-210ENST00000441703 RNF186Q9NXI6 227 aa8.68□□□□□ -1.02
HDAC6-210ENST00000441703 ZNF330Q9Y3S2 320 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-210ENST00000441703 NPR1P16066 1061 aa8.67□□□□□ -1.02
HDAC6-210ENST00000441703 SCNN1DP51172 638 aa8.67□□□□□ -1.02
HDAC6-210ENST00000441703 KIF23Q02241 960 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-210ENST00000441703 ERICH6BQ5W0A0 696 aa8.67□□□□□ -1.02
HDAC6-210ENST00000441703 C7orf43Q8WVR3 580 aa8.67□□□□□ -1.02
HDAC6-210ENST00000441703 AKAP11Q9UKA4 1901 aa8.66□□□□□ -1.02
HDAC6-210ENST00000441703 BCORQ6W2J9 1755 aa8.66□□□□□ -1.02
HDAC6-210ENST00000441703 NEFLP07196 543 aa8.66□□□□□ -1.02
HDAC6-210ENST00000441703 RGMBQ6NW40 437 aa8.66□□□□□ -1.02
HDAC6-210ENST00000441703 LARGE2Q8N3Y3 721 aa8.66□□□□□ -1.02
HDAC6-210ENST00000441703 CCDC102AQ96A19 550 aa8.66□□□□□ -1.02
HDAC6-210ENST00000441703 SCN7AQ01118 1682 aa8.65□□□□□ -1.02
HDAC6-210ENST00000441703 STARD3NLO95772 234 aa8.65□□□□□ -1.02
HDAC6-210ENST00000441703 EIF4A2Q14240 407 aaKnown RBP8.65□□□□□ -1.02
HDAC6-210ENST00000441703 OLFM4Q6UX06 510 aa8.65□□□□□ -1.02
HDAC6-210ENST00000441703 CDC37L1Q7L3B6 337 aa8.65□□□□□ -1.02
HDAC6-210ENST00000441703 ALDH1B1P30837 517 aa8.64□□□□□ -1.03
HDAC6-210ENST00000441703 ZNF157P51786 506 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-210ENST00000441703 NBPF5PQ86XG9 351 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-210ENST00000441703 NIM1KQ8IY84 436 aa8.64□□□□□ -1.03
HDAC6-210ENST00000441703 PSMD1Q99460 953 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms