RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 IL2RBP14784 551 aa11.46□□□□□ -0.57
HDAC6-209ENST00000440653 INTS3Q68E01 1043 aaKnown RBP11.46□□□□□ -0.57
HDAC6-209ENST00000440653 MCM10Q7L590 875 aa11.46□□□□□ -0.57
HDAC6-209ENST00000440653 DDX54Q8TDD1 881 aaKnown RBP11.46□□□□□ -0.57
HDAC6-209ENST00000440653 DCTN1Q14203 1278 aa11.45□□□□□ -0.58
HDAC6-209ENST00000440653 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
HDAC6-209ENST00000440653 TNRC6CQ9HCJ0 1690 aaKnown RBP11.45□□□□□ -0.58
HDAC6-209ENST00000440653 LAMB4A4D0S4 1761 aa11.44□□□□□ -0.58
HDAC6-209ENST00000440653 AMOTQ4VCS5 1084 aa11.44□□□□□ -0.58
HDAC6-209ENST00000440653 STK31Q9BXU1 1019 aa11.44□□□□□ -0.58
HDAC6-209ENST00000440653 NLRP2Q9NX02 1062 aa11.44□□□□□ -0.58
HDAC6-209ENST00000440653 RNF181Q9P0P0 153 aa11.44□□□□□ -0.58
HDAC6-209ENST00000440653 MRC1P22897 1456 aa11.44□□□□□ -0.58
HDAC6-209ENST00000440653 ZBTB7BO15156 539 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-209ENST00000440653 NUCB1Q02818 461 aa11.43□□□□□ -0.58
HDAC6-209ENST00000440653 SKAP1Q86WV1 359 aa11.43□□□□□ -0.58
HDAC6-209ENST00000440653 AIDAQ96BJ3 306 aa11.43□□□□□ -0.58
HDAC6-209ENST00000440653 PDE4DIPQ5VU43 2346 aa11.42□□□□□ -0.58
HDAC6-209ENST00000440653 PHF14O94880 888 aa11.42□□□□□ -0.58
HDAC6-209ENST00000440653 HSPA8P11142 646 aaKnown RBP11.42□□□□□ -0.58
HDAC6-209ENST00000440653 CCT4P50991 539 aaKnown RBP11.42□□□□□ -0.58
HDAC6-209ENST00000440653 CCDC30Q5VVM6 783 aa11.42□□□□□ -0.58
HDAC6-209ENST00000440653 FLAD1Q8NFF5 587 aa11.42□□□□□ -0.58
HDAC6-209ENST00000440653 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-209ENST00000440653 DOT1LQ8TEK3 1739 aa11.41□□□□□ -0.58
HDAC6-209ENST00000440653 C5P01031 1676 aa11.41□□□□□ -0.58
HDAC6-209ENST00000440653 DPEP1P16444 411 aa11.41□□□□□ -0.58
HDAC6-209ENST00000440653 PLEKHO1Q53GL0 409 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-209ENST00000440653 CREBZFQ9NS37 354 aa11.41□□□□□ -0.58
HDAC6-209ENST00000440653 WBP1LQ9NX94 342 aa11.41□□□□□ -0.58
HDAC6-209ENST00000440653 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
HDAC6-209ENST00000440653 ELL2O00472 640 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-209ENST00000440653 HMMRO75330 724 aa11.4□□□□□ -0.58
HDAC6-209ENST00000440653 TAF7Q15545 349 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-209ENST00000440653 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
HDAC6-209ENST00000440653 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
HDAC6-209ENST00000440653 RPAP2Q8IXW5 612 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-209ENST00000440653 CNTNAP1P78357 1384 aa11.4□□□□□ -0.59
HDAC6-209ENST00000440653 KIF13BQ9NQT8 1826 aa11.39□□□□□ -0.59
HDAC6-209ENST00000440653 VEGFAP15692 232 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-209ENST00000440653 VEGFBP49765 207 aa11.39□□□□□ -0.59
HDAC6-209ENST00000440653 TGFB2P61812 414 aa11.39□□□□□ -0.59
HDAC6-209ENST00000440653 BECN1Q14457 450 aa11.39□□□□□ -0.59
HDAC6-209ENST00000440653 BMP2KLQ5H9B9 411 aa11.39□□□□□ -0.59
HDAC6-209ENST00000440653 SBF1O95248 1867 aa11.38□□□□□ -0.59
HDAC6-209ENST00000440653 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
HDAC6-209ENST00000440653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
HDAC6-209ENST00000440653 KCNA3P22001 575 aa11.38□□□□□ -0.59
HDAC6-209ENST00000440653 C1orf141Q5JVX7 400 aa11.38□□□□□ -0.59
HDAC6-209ENST00000440653 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
HDAC6-209ENST00000440653 ANKRD24Q8TF21 1146 aa11.38□□□□□ -0.59
HDAC6-209ENST00000440653 LTV1Q96GA3 475 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-209ENST00000440653 BRCA1P38398 1863 aaKnown RBP11.38□□□□□ -0.59
HDAC6-209ENST00000440653 POTECB2RU33 542 aa11.37□□□□□ -0.59
HDAC6-209ENST00000440653 MMP10P09238 476 aa11.37□□□□□ -0.59
HDAC6-209ENST00000440653 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
HDAC6-209ENST00000440653 ZNF530Q6P9A1 599 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-209ENST00000440653 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
HDAC6-209ENST00000440653 TBC1D32Q96NH3 1257 aa11.37□□□□□ -0.59
HDAC6-209ENST00000440653 IBTKQ9P2D0 1353 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-209ENST00000440653 SLC4A2P04920 1241 aa11.36□□□□□ -0.59
HDAC6-209ENST00000440653 GNAI3P08754 354 aa11.36□□□□□ -0.59
HDAC6-209ENST00000440653 TEFQ10587 303 aa11.36□□□□□ -0.59
HDAC6-209ENST00000440653 FLIIQ13045 1269 aa11.36□□□□□ -0.59
HDAC6-209ENST00000440653 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-209ENST00000440653 AK7Q96M32 723 aa11.36□□□□□ -0.59
HDAC6-209ENST00000440653 UBR3Q6ZT12 1888 aa11.36□□□□□ -0.59
HDAC6-209ENST00000440653 C4BP0C0L5 1744 aa11.35□□□□□ -0.59
HDAC6-209ENST00000440653 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
HDAC6-209ENST00000440653 GLTPD2A6NH11 291 aa11.35□□□□□ -0.59
HDAC6-209ENST00000440653 KRT24Q2M2I5 525 aa11.35□□□□□ -0.59
HDAC6-209ENST00000440653 HDGFL1Q5TGJ6 251 aa11.35□□□□□ -0.59
HDAC6-209ENST00000440653 IL17REQ8NFR9 667 aa11.35□□□□□ -0.59
HDAC6-209ENST00000440653 DCAF5Q96JK2 942 aa11.35□□□□□ -0.59
HDAC6-209ENST00000440653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.591e-11■■□□□ 11.5
HDAC6-209ENST00000440653 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
HDAC6-209ENST00000440653 CEP85Q6P2H3 762 aa11.34□□□□□ -0.59
HDAC6-209ENST00000440653 USHBP1Q8N6Y0 703 aa11.34□□□□□ -0.59
HDAC6-209ENST00000440653 DCTPP1Q9H773 170 aa11.34□□□□□ -0.59
HDAC6-209ENST00000440653 MEGF6O75095 1541 aa11.34□□□□□ -0.59
HDAC6-209ENST00000440653 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
HDAC6-209ENST00000440653 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
HDAC6-209ENST00000440653 RASSF7Q02833 373 aa11.33□□□□□ -0.6
HDAC6-209ENST00000440653 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-209ENST00000440653 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
HDAC6-209ENST00000440653 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
HDAC6-209ENST00000440653 AK9Q5TCS8 1911 aa11.33□□□□□ -0.6
HDAC6-209ENST00000440653 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
HDAC6-209ENST00000440653 GNAI2P04899 355 aa11.32□□□□□ -0.6
HDAC6-209ENST00000440653 ANKRD45Q5TZF3 282 aa11.32□□□□□ -0.6
HDAC6-209ENST00000440653 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
HDAC6-209ENST00000440653 RAPGEF4Q8WZA2 1011 aa11.32□□□□□ -0.6
HDAC6-209ENST00000440653 PALLDQ8WX93 1383 aa11.31□□□□□ -0.6
HDAC6-209ENST00000440653 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
HDAC6-209ENST00000440653 CDC45O75419 566 aa11.31□□□□□ -0.6
HDAC6-209ENST00000440653 TATP17735 454 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-209ENST00000440653 EIF4A1P60842 406 aaKnown RBP11.31□□□□□ -0.6
HDAC6-209ENST00000440653 MEIS3Q99687 375 aa11.31□□□□□ -0.6
HDAC6-209ENST00000440653 SPG7Q9UQ90 795 aa11.31□□□□□ -0.6
HDAC6-209ENST00000440653 HDAC5Q9UQL6 1122 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms