RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
AC009404.1-202ENST00000439955 RC3H1Q5TC82 1133 aaKnown RBP15.1■□□□□ 0.01
AC009404.1-202ENST00000439955 MKRN1Q9UHC7 482 aaKnown RBP15.1■□□□□ 0.01
AC009404.1-202ENST00000439955 LAS1LQ9Y4W2 734 aaKnown RBP15.1■□□□□ 0.01
AC009404.1-202ENST00000439955 CNTNAP4Q9C0A0 1308 aa15.1■□□□□ 0.01
AC009404.1-202ENST00000439955 SLC34A2O95436 690 aa15.09■□□□□ 0.01
AC009404.1-202ENST00000439955 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
AC009404.1-202ENST00000439955 SOS1Q07889 1333 aaPredicted RBP15.09■□□□□ 0.01
AC009404.1-202ENST00000439955 ARFGEF1Q9Y6D6 1849 aa15.08■□□□□ 0.01
AC009404.1-202ENST00000439955 GLTPD2A6NH11 291 aa15.08■□□□□ 0
AC009404.1-202ENST00000439955 RRP1P56182 461 aaKnown RBP15.08■□□□□ 0
AC009404.1-202ENST00000439955 TEFQ10587 303 aa15.08■□□□□ 0
AC009404.1-202ENST00000439955 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
AC009404.1-202ENST00000439955 PTCD1O75127 700 aaKnown RBP15.07■□□□□ 0
AC009404.1-202ENST00000439955 RARSP54136 660 aaKnown RBP15.07■□□□□ 0
AC009404.1-202ENST00000439955 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.07■□□□□ 0
AC009404.1-202ENST00000439955 LGR6Q9HBX8 967 aa15.07■□□□□ 0
AC009404.1-202ENST00000439955 FOXN1O15353 648 aa15.06■□□□□ 0
AC009404.1-202ENST00000439955 LMNB1P20700 586 aa15.06■□□□□ 0
AC009404.1-202ENST00000439955 ALDH1L2Q3SY69 923 aa15.06■□□□□ 0
AC009404.1-202ENST00000439955 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
AC009404.1-202ENST00000439955 GTF3C3Q9Y5Q9 886 aa15.06■□□□□ 0
AC009404.1-202ENST00000439955 USP42Q9H9J4 1324 aaKnown RBP15.06■□□□□ 0
AC009404.1-202ENST00000439955 POLRMTO00411 1230 aaKnown RBP15.05■□□□□ -0
AC009404.1-202ENST00000439955 CRKLP46109 303 aaKnown RBP15.05■□□□□ -0
AC009404.1-202ENST00000439955 POTECB2RU33 542 aa15.04■□□□□ -0
AC009404.1-202ENST00000439955 BRPF1P55201 1214 aaPredicted RBP15.04■□□□□ -0
AC009404.1-202ENST00000439955 TWISTNBQ3B726 338 aaPredicted RBP15.04■□□□□ -0
AC009404.1-202ENST00000439955 SLC52A2Q9HAB3 445 aa15.04■□□□□ -0
AC009404.1-202ENST00000439955 ZC3H4Q9UPT8 1303 aaKnown RBP15.03■□□□□ -0
AC009404.1-202ENST00000439955 ERVV-2B6SEH9 535 aa15.03■□□□□ -0
AC009404.1-202ENST00000439955 VAMP4O75379 141 aa15.03■□□□□ -0
AC009404.1-202ENST00000439955 CABP4P57796 275 aa15.03■□□□□ -0
AC009404.1-202ENST00000439955 COL5A3P25940 1745 aaPredicted RBP15.03■□□□□ -0
AC009404.1-202ENST00000439955 BTBD11A6QL63 1104 aa15.02■□□□□ -0
AC009404.1-202ENST00000439955 HOXB7P09629 217 aa15.02■□□□□ -0
AC009404.1-202ENST00000439955 TM4SF1P30408 202 aa15.02■□□□□ -0
AC009404.1-202ENST00000439955 USPL1Q5W0Q7 1092 aa15.02■□□□□ -0
AC009404.1-202ENST00000439955 C8orf58Q8NAV2 365 aa15.02■□□□□ -0
AC009404.1-202ENST00000439955 CHMP4AQ9BY43 222 aa15.02■□□□□ -0
AC009404.1-202ENST00000439955 SBF1O95248 1867 aa15.01□□□□□ -0.01
AC009404.1-202ENST00000439955 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
AC009404.1-202ENST00000439955 NFKBIEO00221 500 aa15.01□□□□□ -0.01
AC009404.1-202ENST00000439955 POTEIP0CG38 1075 aa15.01□□□□□ -0.01
AC009404.1-202ENST00000439955 POTEJP0CG39 1038 aa15.01□□□□□ -0.01
AC009404.1-202ENST00000439955 TSPYL6Q8N831 410 aa15.01□□□□□ -0.01
AC009404.1-202ENST00000439955 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
AC009404.1-202ENST00000439955 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
AC009404.1-202ENST00000439955 HEG1Q9ULI3 1381 aa15□□□□□ -0.01
AC009404.1-202ENST00000439955 BCAR3O75815 825 aa15□□□□□ -0.01
AC009404.1-202ENST00000439955 FAM161AQ3B820 660 aa15□□□□□ -0.01
AC009404.1-202ENST00000439955 INTS5Q6P9B9 1019 aaKnown RBP15□□□□□ -0.01
AC009404.1-202ENST00000439955 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
AC009404.1-202ENST00000439955 MIS18AQ9NYP9 233 aa15□□□□□ -0.01
AC009404.1-202ENST00000439955 UBR2Q8IWV8 1755 aa14.99□□□□□ -0.01
AC009404.1-202ENST00000439955 ZPR1O75312 459 aa14.99□□□□□ -0.01
AC009404.1-202ENST00000439955 EIF4A1P60842 406 aaKnown RBP14.99□□□□□ -0.01
AC009404.1-202ENST00000439955 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
AC009404.1-202ENST00000439955 C2CD5Q86YS7 1000 aa14.99□□□□□ -0.01
AC009404.1-202ENST00000439955 TTLL6Q8N841 843 aa14.99□□□□□ -0.01
AC009404.1-202ENST00000439955 SSH1Q8WYL5 1049 aa14.99□□□□□ -0.01
AC009404.1-202ENST00000439955 ZNF831Q5JPB2 1677 aa14.99□□□□□ -0.01
AC009404.1-202ENST00000439955 MYH14Q7Z406 1995 aaKnown RBP14.98□□□□□ -0.01
AC009404.1-202ENST00000439955 PDE3AQ14432 1141 aa14.98□□□□□ -0.01
AC009404.1-202ENST00000439955 NFIXQ14938 502 aa14.98□□□□□ -0.01
AC009404.1-202ENST00000439955 DPY19L2Q6NUT2 758 aa14.98□□□□□ -0.01
AC009404.1-202ENST00000439955 NFATC2IPQ8NCF5 419 aa14.98□□□□□ -0.01
AC009404.1-202ENST00000439955 AIDAQ96BJ3 306 aa14.98□□□□□ -0.01
AC009404.1-202ENST00000439955 PRDM10Q9NQV6 1147 aa14.98□□□□□ -0.01
AC009404.1-202ENST00000439955 CACNA1FO60840 1977 aa14.98□□□□□ -0.01
AC009404.1-202ENST00000439955 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
AC009404.1-202ENST00000439955 MS4A1P11836 297 aa14.97□□□□□ -0.01
AC009404.1-202ENST00000439955 CTCFP49711 727 aaPredicted RBP14.97□□□□□ -0.01
AC009404.1-202ENST00000439955 KRT24Q2M2I5 525 aa14.97□□□□□ -0.01
AC009404.1-202ENST00000439955 ZNF790Q6PG37 636 aa14.97□□□□□ -0.01
AC009404.1-202ENST00000439955 CNTNAP1P78357 1384 aa14.97□□□□□ -0.01
AC009404.1-202ENST00000439955 ELL2O00472 640 aaPredicted RBP14.96□□□□□ -0.01
AC009404.1-202ENST00000439955 IPO8O15397 1037 aaKnown RBP14.96□□□□□ -0.01
AC009404.1-202ENST00000439955 CANXP27824 592 aaKnown RBP14.96□□□□□ -0.01
AC009404.1-202ENST00000439955 LBX1P52954 281 aa14.96□□□□□ -0.01
AC009404.1-202ENST00000439955 ERFEQ4G0M1 354 aa14.96□□□□□ -0.01
AC009404.1-202ENST00000439955 DNAJC10Q8IXB1 793 aa14.96□□□□□ -0.01
AC009404.1-202ENST00000439955 MRPL50Q8N5N7 158 aaKnown RBP14.96□□□□□ -0.01
AC009404.1-202ENST00000439955 ARHGAP45Q92619 1136 aa14.96□□□□□ -0.01
AC009404.1-202ENST00000439955 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.02
AC009404.1-202ENST00000439955 C21orf2O43822 256 aa14.95□□□□□ -0.02
AC009404.1-202ENST00000439955 DDNO94850 711 aaPredicted RBP14.95□□□□□ -0.02
AC009404.1-202ENST00000439955 SERPINB2P05120 415 aa14.95□□□□□ -0.02
AC009404.1-202ENST00000439955 VEGFBP49765 207 aa14.95□□□□□ -0.02
AC009404.1-202ENST00000439955 ZKSCAN2Q63HK3 967 aa14.95□□□□□ -0.02
AC009404.1-202ENST00000439955 BCL2L13Q9BXK5 485 aa14.95□□□□□ -0.02
AC009404.1-202ENST00000439955 LAMB4A4D0S4 1761 aa14.95□□□□□ -0.02
AC009404.1-202ENST00000439955 H0YIN7 160 aa14.94□□□□□ -0.02
AC009404.1-202ENST00000439955 PLIN1O60240 522 aa14.94□□□□□ -0.02
AC009404.1-202ENST00000439955 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
AC009404.1-202ENST00000439955 TTC5Q8N0Z6 440 aa14.94□□□□□ -0.02
AC009404.1-202ENST00000439955 ABHD8Q96I13 439 aa14.94□□□□□ -0.02
AC009404.1-202ENST00000439955 TJP1Q07157 1748 aa14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 KCNQ3O43525 872 aa14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 IRX6P78412 446 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms