RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 BABAM1Q9NWV8 329 aa21.42■■□□□ 1.02
SNRPD3-204ENST00000439775 SBF1O95248 1867 aa21.41■■□□□ 1.02
SNRPD3-204ENST00000439775 ERBB4Q15303 1308 aa21.41■■□□□ 1.02
SNRPD3-204ENST00000439775 RASSF7Q02833 373 aa21.41■■□□□ 1.02
SNRPD3-204ENST00000439775 TSPYL4Q9UJ04 414 aa21.41■■□□□ 1.02
SNRPD3-204ENST00000439775 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
SNRPD3-204ENST00000439775 LMNB1P20700 586 aa21.4■■□□□ 1.02
SNRPD3-204ENST00000439775 STYK1Q6J9G0 422 aa21.4■■□□□ 1.02
SNRPD3-204ENST00000439775 ZNF622Q969S3 477 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNRPD3-204ENST00000439775 CEP350Q5VT06 3117 aa21.4■■□□□ 1.02
SNRPD3-204ENST00000439775 ERVV-1B6SEH8 477 aa21.39■■□□□ 1.01
SNRPD3-204ENST00000439775 NFKBIEO00221 500 aa21.39■■□□□ 1.01
SNRPD3-204ENST00000439775 SRGNP10124 158 aa21.39■■□□□ 1.01
SNRPD3-204ENST00000439775 WDR43Q15061 677 aaKnown RBP eCLIP21.39■■□□□ 1.01
SNRPD3-204ENST00000439775 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.01
SNRPD3-204ENST00000439775 KDM2BQ8NHM5 1336 aa21.38■■□□□ 1.01
SNRPD3-204ENST00000439775 HLFQ16534 295 aa21.38■■□□□ 1.01
SNRPD3-204ENST00000439775 TPTE2Q6XPS3 522 aa21.38■■□□□ 1.01
SNRPD3-204ENST00000439775 CNKSR1Q969H4 720 aa21.38■■□□□ 1.01
SNRPD3-204ENST00000439775 MASTLQ96GX5 879 aa21.38■■□□□ 1.01
SNRPD3-204ENST00000439775 NMRK2Q9NPI5 230 aa21.38■■□□□ 1.01
SNRPD3-204ENST00000439775 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
SNRPD3-204ENST00000439775 MAP3K15Q6ZN16 1313 aa21.37■■□□□ 1.01
SNRPD3-204ENST00000439775 KLRG2A4D1S0 409 aaPredicted RBP21.37■■□□□ 1.01
SNRPD3-204ENST00000439775 HSPA6P17066 643 aa21.37■■□□□ 1.01
SNRPD3-204ENST00000439775 RUNDC1Q96C34 613 aa21.37■■□□□ 1.01
SNRPD3-204ENST00000439775 TOMM70O94826 608 aa21.36■■□□□ 1.01
SNRPD3-204ENST00000439775 PRELPP51888 382 aa21.36■■□□□ 1.01
SNRPD3-204ENST00000439775 KIF6Q6ZMV9 814 aa21.36■■□□□ 1.01
SNRPD3-204ENST00000439775 CCDC146Q8IYE0 955 aa21.36■■□□□ 1.01
SNRPD3-204ENST00000439775 RRP7AQ9Y3A4 280 aaKnown RBP21.36■■□□□ 1.01
SNRPD3-204ENST00000439775 TNRC6CQ9HCJ0 1690 aaKnown RBP21.36■■□□□ 1.01
SNRPD3-204ENST00000439775 C21orf2O43822 256 aa21.35■■□□□ 1.01
SNRPD3-204ENST00000439775 PRPF40BQ6NWY9 871 aaKnown RBP21.35■■□□□ 1.01
SNRPD3-204ENST00000439775 TIAM2Q8IVF5 1701 aa21.35■■□□□ 1.01
SNRPD3-204ENST00000439775 IBTKQ9P2D0 1353 aaPredicted RBP21.35■■□□□ 1.01
SNRPD3-204ENST00000439775 LTBP3Q9NS15 1303 aa21.34■■□□□ 1.01
SNRPD3-204ENST00000439775 MYL6BP14649 208 aa21.34■■□□□ 1.01
SNRPD3-204ENST00000439775 SOGA3Q5TF21 947 aa21.34■■□□□ 1.01
SNRPD3-204ENST00000439775 TTLL7Q6ZT98 887 aa21.34■■□□□ 1.01
SNRPD3-204ENST00000439775 NGEFQ8N5V2 710 aa21.34■■□□□ 1.01
SNRPD3-204ENST00000439775 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
SNRPD3-204ENST00000439775 FER1L6Q2WGJ9 1857 aa21.33■■□□□ 1.01
SNRPD3-204ENST00000439775 NPR1P16066 1061 aa21.33■■□□□ 1.01
SNRPD3-204ENST00000439775 NYXQ9GZU5 481 aa21.33■■□□□ 1.01
SNRPD3-204ENST00000439775 RIC1Q4ADV7 1423 aa21.32■■□□□ 1
SNRPD3-204ENST00000439775 NEUROD2Q15784 382 aa21.32■■□□□ 1
SNRPD3-204ENST00000439775 LRP10Q7Z4F1 713 aa21.32■■□□□ 1
SNRPD3-204ENST00000439775 TRIM35Q9UPQ4 493 aa21.32■■□□□ 1
SNRPD3-204ENST00000439775 NUP98P52948 1817 aa21.32■■□□□ 1
SNRPD3-204ENST00000439775 SLX4Q8IY92 1834 aa21.32■■□□□ 1
SNRPD3-204ENST00000439775 CHL1O00533 1208 aa21.31■■□□□ 1
SNRPD3-204ENST00000439775 PDIA6Q15084 440 aa21.31■■□□□ 1
SNRPD3-204ENST00000439775 RBM46Q8TBY0 533 aaKnown RBP21.31■■□□□ 1
SNRPD3-204ENST00000439775 ZBTB3Q9H5J0 574 aa21.31■■□□□ 1
SNRPD3-204ENST00000439775 ZNF219Q9P2Y4 722 aaPredicted RBP21.31■■□□□ 1
SNRPD3-204ENST00000439775 GLTPD2A6NH11 291 aa21.3■■□□□ 1
SNRPD3-204ENST00000439775 FAM177BA6PVY3 158 aa21.3■■□□□ 1
SNRPD3-204ENST00000439775 GTF2E1P29083 439 aaPredicted RBP21.3■■□□□ 1
SNRPD3-204ENST00000439775 GIGYF2Q6Y7W6 1299 aaKnown RBP21.3■■□□□ 1
SNRPD3-204ENST00000439775 TAOK3Q9H2K8 898 aa21.3■■□□□ 1
SNRPD3-204ENST00000439775 ABCC12Q96J65 1359 aa21.3■■□□□ 1
SNRPD3-204ENST00000439775 UBN2Q6ZU65 1347 aa21.29■■□□□ 1
SNRPD3-204ENST00000439775 CACNA1SQ13698 1873 aa21.29■■□□□ 1
SNRPD3-204ENST00000439775 C16orf71Q8IYS4 520 aaPredicted RBP21.29■■□□□ 1
SNRPD3-204ENST00000439775 C7orf43Q8WVR3 580 aa21.29■■□□□ 1
SNRPD3-204ENST00000439775 EIF2S2P20042 333 aaKnown RBP21.28■■□□□ 1
SNRPD3-204ENST00000439775 CRY2Q49AN0 593 aa21.28■■□□□ 1
SNRPD3-204ENST00000439775 ZNF34Q8IZ26 560 aa21.28■■□□□ 1
SNRPD3-204ENST00000439775 CCDC93Q567U6 631 aa21.27■■□□□ 1
SNRPD3-204ENST00000439775 RRAGCQ9HB90 399 aa21.27■■□□□ 1
SNRPD3-204ENST00000439775 DICER1Q9UPY3 1922 aaKnown RBP21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 HOXB7P09629 217 aa21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 GPTP24298 496 aa21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 FSTL1Q12841 308 aa21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 PROSER3Q2NL68 480 aa21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 ERFEQ4G0M1 354 aa21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 NUTM1Q86Y26 1132 aa21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 CCDC88AQ3V6T2 1871 aa21.26■□□□□ 0.99
SNRPD3-204ENST00000439775 NTSR2O95665 410 aa21.25■□□□□ 0.99
SNRPD3-204ENST00000439775 ALDH1B1P30837 517 aa21.25■□□□□ 0.99
SNRPD3-204ENST00000439775 APLP1P51693 650 aa21.25■□□□□ 0.99
SNRPD3-204ENST00000439775 PARP10Q53GL7 1025 aa21.25■□□□□ 0.99
SNRPD3-204ENST00000439775 SUSD4Q5VX71 490 aa21.25■□□□□ 0.99
SNRPD3-204ENST00000439775 CFAP44Q96MT7 982 aa21.24■□□□□ 0.99
SNRPD3-204ENST00000439775 DDX21Q9NR30 783 aaKnown RBP eCLIP21.24■□□□□ 0.99
SNRPD3-204ENST00000439775 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
SNRPD3-204ENST00000439775 WDR90Q96KV7 1748 aa21.24■□□□□ 0.99
SNRPD3-204ENST00000439775 ANXA1P04083 346 aa21.23■□□□□ 0.99
SNRPD3-204ENST00000439775 VEGFAP15692 232 aaPredicted RBP21.23■□□□□ 0.99
SNRPD3-204ENST00000439775 KRT24Q2M2I5 525 aa21.23■□□□□ 0.99
SNRPD3-204ENST00000439775 DPY19L2Q6NUT2 758 aa21.23■□□□□ 0.99
SNRPD3-204ENST00000439775 PPP1R42Q7Z4L9 355 aa21.23■□□□□ 0.99
SNRPD3-204ENST00000439775 FKBP4Q02790 459 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNRPD3-204ENST00000439775 RTKN2Q8IZC4 609 aa21.22■□□□□ 0.99
SNRPD3-204ENST00000439775 RNF123Q5XPI4 1314 aa21.22■□□□□ 0.99
SNRPD3-204ENST00000439775 SNED1Q8TER0 1413 aa21.21■□□□□ 0.99
SNRPD3-204ENST00000439775 HOXA10P31260 410 aaPredicted RBP21.21■□□□□ 0.99
SNRPD3-204ENST00000439775 HSP90AB3PQ58FF7 597 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms