RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 N4BP2Q86UW6 1770 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-207ENST00000438317 KIF3CO14782 793 aa13.66□□□□□ -0.22
ERGIC3-207ENST00000438317 TEFQ10587 303 aa13.66□□□□□ -0.22
ERGIC3-207ENST00000438317 C1orf141Q5JVX7 400 aa13.66□□□□□ -0.22
ERGIC3-207ENST00000438317 MEIS3Q99687 375 aa13.66□□□□□ -0.22
ERGIC3-207ENST00000438317 FAM208AQ9UK61 1670 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-207ENST00000438317 CDC45O75419 566 aa13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 EIF4A1P60842 406 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 ATP8B2P98198 1209 aa13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 NFKBIBQ15653 356 aa13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 ZNF530Q6P9A1 599 aaPredicted RBP13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 SLC4A10Q6U841 1118 aa13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 USHBP1Q8N6Y0 703 aa13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 PXDNLA1KZ92 1463 aa13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 KDM3BQ7LBC6 1761 aa13.65□□□□□ -0.22
ERGIC3-207ENST00000438317 DEKP35659 375 aaKnown RBP13.64□□□□□ -0.23
ERGIC3-207ENST00000438317 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
ERGIC3-207ENST00000438317 SNX21Q969T3 373 aa13.64□□□□□ -0.23
ERGIC3-207ENST00000438317 TBC1D2Q9BYX2 928 aa13.64□□□□□ -0.23
ERGIC3-207ENST00000438317 PLEKHG2Q9H7P9 1386 aa13.63□□□□□ -0.23
ERGIC3-207ENST00000438317 RNMTO43148 476 aaKnown RBP13.63□□□□□ -0.23
ERGIC3-207ENST00000438317 DNAJC5GQ8N7S2 189 aa13.63□□□□□ -0.23
ERGIC3-207ENST00000438317 ZCRB1Q8TBF4 217 aaKnown RBP13.63□□□□□ -0.23
ERGIC3-207ENST00000438317 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
ERGIC3-207ENST00000438317 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
ERGIC3-207ENST00000438317 F6X3S4 739 aa13.62□□□□□ -0.23
ERGIC3-207ENST00000438317 TTC22Q5TAA0 569 aa13.62□□□□□ -0.23
ERGIC3-207ENST00000438317 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
ERGIC3-207ENST00000438317 OSBPL3Q9H4L5 887 aa13.62□□□□□ -0.23
ERGIC3-207ENST00000438317 LGR6Q9HBX8 967 aa13.62□□□□□ -0.23
ERGIC3-207ENST00000438317 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
ERGIC3-207ENST00000438317 HSCBQ8IWL3 235 aa13.61□□□□□ -0.23
ERGIC3-207ENST00000438317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.61□□□□□ -0.23
ERGIC3-207ENST00000438317 MEGF6O75095 1541 aa13.6□□□□□ -0.23
ERGIC3-207ENST00000438317 C5P01031 1676 aa13.6□□□□□ -0.23
ERGIC3-207ENST00000438317 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
ERGIC3-207ENST00000438317 FLAD1Q8NFF5 587 aa13.6□□□□□ -0.23
ERGIC3-207ENST00000438317 SRCIN1Q9C0H9 1055 aa13.6□□□□□ -0.23
ERGIC3-207ENST00000438317 UBTFL1P0CB47 393 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-207ENST00000438317 APLP1P51693 650 aa13.59□□□□□ -0.23
ERGIC3-207ENST00000438317 ANTXR1Q9H6X2 564 aa13.59□□□□□ -0.23
ERGIC3-207ENST00000438317 DBF4Q9UBU7 674 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-207ENST00000438317 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
ERGIC3-207ENST00000438317 TAF1LQ8IZX4 1826 aa13.59□□□□□ -0.23
ERGIC3-207ENST00000438317 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
ERGIC3-207ENST00000438317 MPRIPQ6WCQ1 1025 aa13.58□□□□□ -0.24
ERGIC3-207ENST00000438317 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.24
ERGIC3-207ENST00000438317 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
ERGIC3-207ENST00000438317 USP44Q9H0E7 712 aa13.58□□□□□ -0.24
ERGIC3-207ENST00000438317 CHMP5Q9NZZ3 219 aa13.58□□□□□ -0.24
ERGIC3-207ENST00000438317 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
ERGIC3-207ENST00000438317 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-207ENST00000438317 ADAMTS7Q9UKP4 1686 aa13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 TATP17735 454 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 EIF2S2P20042 333 aaKnown RBP13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 SMIM5Q71RC9 77 aa13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 C16orf71Q8IYS4 520 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 DNAAF4Q8WXU2 420 aa13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 NECTIN2Q92692 538 aa13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
ERGIC3-207ENST00000438317 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
ERGIC3-207ENST00000438317 GSPT1P15170 499 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-207ENST00000438317 HSP90AB4PQ58FF6 505 aa13.56□□□□□ -0.24
ERGIC3-207ENST00000438317 SSH3Q8TE77 659 aa13.56□□□□□ -0.24
ERGIC3-207ENST00000438317 PHAXQ9H814 394 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-207ENST00000438317 HYPKQ9NX55 129 aa13.56□□□□□ -0.24
ERGIC3-207ENST00000438317 SCN11AQ9UI33 1791 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 TOMM70O94826 608 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 REC8O95072 547 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 PDE1AP54750 535 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 STAP2Q9UGK3 403 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 AOX1Q06278 1338 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 C4BP0C0L5 1744 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
ERGIC3-207ENST00000438317 SMARCA5O60264 1052 aaPredicted RBP13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 FRAT2O75474 233 aaPredicted RBP13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 SDSP20132 328 aa13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 GSE1Q14687 1217 aa13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 BEND3Q5T5X7 828 aa13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 KSR2Q6VAB6 950 aa13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 USP26Q9BXU7 913 aa13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 CHPF2Q9P2E5 772 aa13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 LRRFIP2Q9Y608 721 aaKnown RBP13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 UBR3Q6ZT12 1888 aa13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 IBTKQ9P2D0 1353 aaPredicted RBP13.54□□□□□ -0.24
ERGIC3-207ENST00000438317 KCNQ3O43525 872 aa13.53□□□□□ -0.24
ERGIC3-207ENST00000438317 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
ERGIC3-207ENST00000438317 HMGB2P26583 209 aaKnown RBP13.53□□□□□ -0.24
ERGIC3-207ENST00000438317 POLA2Q14181 598 aa13.53□□□□□ -0.24
ERGIC3-207ENST00000438317 RABEP1Q15276 862 aa13.53□□□□□ -0.24
ERGIC3-207ENST00000438317 COL13A1Q5TAT6 717 aaPredicted RBP13.53□□□□□ -0.24
ERGIC3-207ENST00000438317 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
ERGIC3-207ENST00000438317 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
ERGIC3-207ENST00000438317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms