RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 RBM46Q8TBY0 533 aaKnown RBP10.97□□□□□ -0.65
RPE-211ENST00000438265 FMNL2Q96PY5 1086 aa10.97□□□□□ -0.65
RPE-211ENST00000438265 THUMPD2Q9BTF0 503 aaKnown RBP10.97□□□□□ -0.65
RPE-211ENST00000438265 ADAMTSL1Q8N6G6 1762 aa10.97□□□□□ -0.65
RPE-211ENST00000438265 SCN4AP35499 1836 aa10.97□□□□□ -0.65
RPE-211ENST00000438265 ANP32CO43423 234 aa10.96□□□□□ -0.65
RPE-211ENST00000438265 C21orf2O43822 256 aa10.96□□□□□ -0.65
RPE-211ENST00000438265 STARD3NLO95772 234 aa10.96□□□□□ -0.65
RPE-211ENST00000438265 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
RPE-211ENST00000438265 POTEJP0CG39 1038 aa10.96□□□□□ -0.65
RPE-211ENST00000438265 APLP1P51693 650 aa10.96□□□□□ -0.65
RPE-211ENST00000438265 HLFQ16534 295 aa10.96□□□□□ -0.65
RPE-211ENST00000438265 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
RPE-211ENST00000438265 NEFMP07197 916 aa10.95□□□□□ -0.66
RPE-211ENST00000438265 U2AF1L5P0DN76 240 aaPredicted RBP10.95□□□□□ -0.66
RPE-211ENST00000438265 LMNB1P20700 586 aa10.95□□□□□ -0.66
RPE-211ENST00000438265 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
RPE-211ENST00000438265 DZIP3Q86Y13 1208 aaKnown RBP10.95□□□□□ -0.66
RPE-211ENST00000438265 ZNF622Q969S3 477 aaKnown RBP eCLIP10.95□□□□□ -0.66
RPE-211ENST00000438265 COL4A1P02462 1669 aa10.95□□□□□ -0.66
RPE-211ENST00000438265 ABCC12Q96J65 1359 aa10.94□□□□□ -0.66
RPE-211ENST00000438265 GLTPD2A6NH11 291 aa10.94□□□□□ -0.66
RPE-211ENST00000438265 H0YIN7 160 aa10.94□□□□□ -0.66
RPE-211ENST00000438265 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
RPE-211ENST00000438265 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
RPE-211ENST00000438265 BRIP1Q9BX63 1249 aa10.94□□□□□ -0.66
RPE-211ENST00000438265 DDX60Q8IY21 1712 aaKnown RBP10.93□□□□□ -0.66
RPE-211ENST00000438265 SRGNP10124 158 aa10.93□□□□□ -0.66
RPE-211ENST00000438265 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
RPE-211ENST00000438265 KDM2BQ8NHM5 1336 aa10.92□□□□□ -0.66
RPE-211ENST00000438265 A0A087WZG4 1122 aa10.92□□□□□ -0.66
RPE-211ENST00000438265 FAM177BA6PVY3 158 aa10.92□□□□□ -0.66
RPE-211ENST00000438265 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
RPE-211ENST00000438265 CNBD1Q8NA66 436 aa10.92□□□□□ -0.66
RPE-211ENST00000438265 KLRG1Q96E93 195 aa10.92□□□□□ -0.66
RPE-211ENST00000438265 TEX13AQ9BXU3 409 aaPredicted RBP10.92□□□□□ -0.66
RPE-211ENST00000438265 POLR2AP24928 1970 aaKnown RBP10.92□□□□□ -0.66
RPE-211ENST00000438265 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
RPE-211ENST00000438265 DDNO94850 711 aaPredicted RBP10.91□□□□□ -0.66
RPE-211ENST00000438265 SNRPA1P09661 255 aaKnown RBP10.91□□□□□ -0.66
RPE-211ENST00000438265 FSTL1Q12841 308 aa10.91□□□□□ -0.66
RPE-211ENST00000438265 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
RPE-211ENST00000438265 TTLL7Q6ZT98 887 aa10.91□□□□□ -0.66
RPE-211ENST00000438265 SETDB2Q96T68 719 aa10.91□□□□□ -0.66
RPE-211ENST00000438265 UBN2Q6ZU65 1347 aa10.9□□□□□ -0.66
RPE-211ENST00000438265 MAPK8IP3Q9UPT6 1336 aa10.9□□□□□ -0.66
RPE-211ENST00000438265 PDE6BP35913 854 aa10.9□□□□□ -0.66
RPE-211ENST00000438265 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
RPE-211ENST00000438265 C3orf67Q6ZVT6 689 aa10.9□□□□□ -0.66
RPE-211ENST00000438265 JMYQ8N9B5 988 aa10.9□□□□□ -0.66
RPE-211ENST00000438265 ZNF541Q9H0D2 1346 aa10.89□□□□□ -0.67
RPE-211ENST00000438265 LTBP3Q9NS15 1303 aa10.89□□□□□ -0.67
RPE-211ENST00000438265 ZC3H4Q9UPT8 1303 aaKnown RBP10.89□□□□□ -0.67
RPE-211ENST00000438265 KLRG2A4D1S0 409 aaPredicted RBP10.89□□□□□ -0.67
RPE-211ENST00000438265 EIF4A1P60842 406 aaKnown RBP10.89□□□□□ -0.67
RPE-211ENST00000438265 TAF7Q15545 349 aaPredicted RBP10.89□□□□□ -0.67
RPE-211ENST00000438265 ERFEQ4G0M1 354 aa10.89□□□□□ -0.67
RPE-211ENST00000438265 STYK1Q6J9G0 422 aa10.89□□□□□ -0.67
RPE-211ENST00000438265 LRP10Q7Z4F1 713 aa10.89□□□□□ -0.67
RPE-211ENST00000438265 NUTM1Q86Y26 1132 aa10.89□□□□□ -0.67
RPE-211ENST00000438265 C16orf71Q8IYS4 520 aaPredicted RBP10.89□□□□□ -0.67
RPE-211ENST00000438265 NGEFQ8N5V2 710 aa10.89□□□□□ -0.67
RPE-211ENST00000438265 NIP7Q9Y221 180 aaKnown RBP eCLIP10.89□□□□□ -0.67
RPE-211ENST00000438265 ANXA1P04083 346 aa10.88□□□□□ -0.67
RPE-211ENST00000438265 VEGFAP15692 232 aaPredicted RBP10.88□□□□□ -0.67
RPE-211ENST00000438265 LMOD3Q0VAK6 560 aa10.88□□□□□ -0.67
RPE-211ENST00000438265 PROSER3Q2NL68 480 aa10.88□□□□□ -0.67
RPE-211ENST00000438265 NBPF5PQ86XG9 351 aaPredicted RBP10.88□□□□□ -0.67
RPE-211ENST00000438265 MASTLQ96GX5 879 aa10.88□□□□□ -0.67
RPE-211ENST00000438265 ZNF277Q9NRM2 450 aaPredicted RBP10.88□□□□□ -0.67
RPE-211ENST00000438265 NFE2L2Q16236 605 aa10.87□□□□□ -0.67
RPE-211ENST00000438265 KRT24Q2M2I5 525 aa10.87□□□□□ -0.67
RPE-211ENST00000438265 CLEC4GQ6UXB4 293 aa10.87□□□□□ -0.67
RPE-211ENST00000438265 SMC1BQ8NDV3 1235 aa10.87□□□□□ -0.67
RPE-211ENST00000438265 RTF1Q92541 710 aaKnown RBP10.87□□□□□ -0.67
RPE-211ENST00000438265 RUNDC1Q96C34 613 aa10.87□□□□□ -0.67
RPE-211ENST00000438265 TAOK3Q9H2K8 898 aa10.87□□□□□ -0.67
RPE-211ENST00000438265 GPTP24298 496 aa10.86□□□□□ -0.67
RPE-211ENST00000438265 ST5P78524 1137 aa10.86□□□□□ -0.67
RPE-211ENST00000438265 PDIA6Q15084 440 aa10.86□□□□□ -0.67
RPE-211ENST00000438265 NCBP3Q53F19 620 aaKnown RBP10.86□□□□□ -0.67
RPE-211ENST00000438265 CNKSR1Q969H4 720 aa10.86□□□□□ -0.67
RPE-211ENST00000438265 ZNF428Q96B54 188 aa10.86□□□□□ -0.67
RPE-211ENST00000438265 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
RPE-211ENST00000438265 LRRC37AA6NMS7 1700 aa10.86□□□□□ -0.67
RPE-211ENST00000438265 SPEF2Q9C093 1822 aa10.86□□□□□ -0.67
RPE-211ENST00000438265 SCN9AQ15858 1988 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 MYL6BP14649 208 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 NPR1P16066 1061 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 FMR1Q06787 632 aaKnown RBP eCLIP10.85□□□□□ -0.67
RPE-211ENST00000438265 SUSD4Q5VX71 490 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 ZBTB3Q9H5J0 574 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 ADAMTS8Q9UP79 889 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 DUOX1Q9NRD9 1551 aa10.85□□□□□ -0.67
RPE-211ENST00000438265 MAP3K15Q6ZN16 1313 aa10.84□□□□□ -0.67
RPE-211ENST00000438265 RIC1Q4ADV7 1423 aa10.84□□□□□ -0.67
RPE-211ENST00000438265 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
RPE-211ENST00000438265 NTSR2O95665 410 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms