RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 METTL22Q9BUU2 404 aaPredicted RBP29.03■■■□□ 2.24
MBD3-202ENST00000434436 IL25Q9H293 177 aa29.02■■■□□ 2.24
MBD3-202ENST00000434436 ZCRB1Q8TBF4 217 aaKnown RBP29.02■■■□□ 2.24
MBD3-202ENST00000434436 LAMB4A4D0S4 1761 aa29.01■■■□□ 2.23
MBD3-202ENST00000434436 ST18O60284 1047 aa29.01■■■□□ 2.23
MBD3-202ENST00000434436 MYD88Q99836 296 aa29.01■■■□□ 2.23
MBD3-202ENST00000434436 ANO2Q9NQ90 1003 aa29.01■■■□□ 2.23
MBD3-202ENST00000434436 NEXNQ0ZGT2 675 aa29.01■■■□□ 2.23
MBD3-202ENST00000434436 GCKRQ14397 625 aa29■■■□□ 2.23
MBD3-202ENST00000434436 ANKRD13DQ6ZTN6 518 aa29■■■□□ 2.23
MBD3-202ENST00000434436 PCDH11XQ9BZA7 1347 aa29■■■□□ 2.23
MBD3-202ENST00000434436 PCDH11YQ9BZA8 1340 aa29■■■□□ 2.23
MBD3-202ENST00000434436 CLASRPQ8N2M8 674 aaKnown RBP29■■■□□ 2.23
MBD3-202ENST00000434436 PALD1Q9ULE6 856 aa29■■■□□ 2.23
MBD3-202ENST00000434436 TTC41PQ6P2S7 1318 aa29■■■□□ 2.23
MBD3-202ENST00000434436 ERC1Q8IUD2 1116 aa28.99■■■□□ 2.23
MBD3-202ENST00000434436 ARFGEF2Q9Y6D5 1785 aa28.97■■■□□ 2.23
MBD3-202ENST00000434436 SHANK3Q9BYB0 1731 aa28.97■■■□□ 2.23
MBD3-202ENST00000434436 CNTROBQ8N137 903 aa28.96■■■□□ 2.23
MBD3-202ENST00000434436 CARD10Q9BWT7 1032 aa28.96■■■□□ 2.23
MBD3-202ENST00000434436 AFDNP55196 1824 aaKnown RBP28.96■■■□□ 2.23
MBD3-202ENST00000434436 DDX11L8A8MPP1 907 aa28.96■■■□□ 2.23
MBD3-202ENST00000434436 MCCP23508 829 aa28.96■■■□□ 2.23
MBD3-202ENST00000434436 GLRX3O76003 335 aaKnown RBP28.95■■■□□ 2.23
MBD3-202ENST00000434436 SASH1O94885 1247 aa28.95■■■□□ 2.23
MBD3-202ENST00000434436 EPHA10Q5JZY3 1008 aa28.95■■■□□ 2.23
MBD3-202ENST00000434436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.95■■■□□ 2.23
MBD3-202ENST00000434436 UBR2Q8IWV8 1755 aa28.95■■■□□ 2.23
MBD3-202ENST00000434436 TRAK2O60296 914 aa28.95■■■□□ 2.22
MBD3-202ENST00000434436 ANAPC15P60006 121 aa28.95■■■□□ 2.22
MBD3-202ENST00000434436 NHSL1Q5SYE7 1610 aa28.95■■■□□ 2.22
MBD3-202ENST00000434436 SSFA2P28290 1259 aa28.94■■■□□ 2.22
MBD3-202ENST00000434436 IL17RAQ96F46 866 aa28.94■■■□□ 2.22
MBD3-202ENST00000434436 IL2RBP14784 551 aa28.94■■■□□ 2.22
MBD3-202ENST00000434436 ERVV-2B6SEH9 535 aa28.93■■■□□ 2.22
MBD3-202ENST00000434436 NEK4P51957 841 aa28.93■■■□□ 2.22
MBD3-202ENST00000434436 NKX1-1Q15270 411 aaPredicted RBP28.93■■■□□ 2.22
MBD3-202ENST00000434436 ECHDC1Q9NTX5 307 aa28.93■■■□□ 2.22
MBD3-202ENST00000434436 SGSM2O43147 1006 aa28.93■■■□□ 2.22
MBD3-202ENST00000434436 EPB41L2O43491 1005 aaKnown RBP28.93■■■□□ 2.22
MBD3-202ENST00000434436 G3BP1Q13283 466 aaKnown RBP eCLIP28.92■■■□□ 2.22
MBD3-202ENST00000434436 GBP4Q96PP9 640 aa28.92■■■□□ 2.22
MBD3-202ENST00000434436 STRN4Q9NRL3 753 aa28.92■■■□□ 2.22
MBD3-202ENST00000434436 IFIT2P09913 472 aaKnown RBP28.92■■■□□ 2.22
MBD3-202ENST00000434436 AACSQ86V21 672 aa28.91■■■□□ 2.22
MBD3-202ENST00000434436 PAPPAQ13219 1627 aa28.91■■■□□ 2.22
MBD3-202ENST00000434436 NBPF26B4DH59 902 aa28.91■■■□□ 2.22
MBD3-202ENST00000434436 NBPF14Q5TI25 921 aa28.91■■■□□ 2.22
MBD3-202ENST00000434436 NBPF10Q6P3W6 841 aaKnown RBP28.91■■■□□ 2.22
MBD3-202ENST00000434436 NBPF15Q8N660 670 aa28.91■■■□□ 2.22
MBD3-202ENST00000434436 JARID2Q92833 1246 aaPredicted RBP28.91■■■□□ 2.22
MBD3-202ENST00000434436 KCPQ6ZWJ8 1503 aa28.9■■■□□ 2.22
MBD3-202ENST00000434436 KLHDC4Q8TBB5 520 aa28.9■■■□□ 2.22
MBD3-202ENST00000434436 EAF2Q96CJ1 260 aaPredicted RBP28.9■■■□□ 2.22
MBD3-202ENST00000434436 ZGPATQ8N5A5 531 aaKnown RBP28.89■■■□□ 2.22
MBD3-202ENST00000434436 HSPA4P34932 840 aa28.89■■■□□ 2.21
MBD3-202ENST00000434436 PLBD2Q8NHP8 589 aa28.89■■■□□ 2.21
MBD3-202ENST00000434436 DDX54Q8TDD1 881 aaKnown RBP28.89■■■□□ 2.21
MBD3-202ENST00000434436 GPATCH3Q96I76 525 aa28.89■■■□□ 2.21
MBD3-202ENST00000434436 SIL1Q9H173 461 aa28.89■■■□□ 2.21
MBD3-202ENST00000434436 ERBB4Q15303 1308 aa28.88■■■□□ 2.21
MBD3-202ENST00000434436 ATP5J2-PTCD1G3V325 749 aa28.88■■■□□ 2.21
MBD3-202ENST00000434436 PTCD1O75127 700 aaKnown RBP28.88■■■□□ 2.21
MBD3-202ENST00000434436 CLEC17AQ6ZS10 378 aa28.88■■■□□ 2.21
MBD3-202ENST00000434436 LSG1Q9H089 658 aaKnown RBP28.87■■■□□ 2.21
MBD3-202ENST00000434436 CWC22Q9HCG8 908 aaKnown RBP28.87■■■□□ 2.21
MBD3-202ENST00000434436 RAD50Q92878 1312 aa28.87■■■□□ 2.21
MBD3-202ENST00000434436 EVA1CP58658 441 aa28.86■■■□□ 2.21
MBD3-202ENST00000434436 CYP2E1P05181 493 aaPredicted RBP28.86■■■□□ 2.21
MBD3-202ENST00000434436 CWC27Q6UX04 472 aaKnown RBP28.86■■■□□ 2.21
MBD3-202ENST00000434436 UBE3BQ7Z3V4 1068 aa28.86■■■□□ 2.21
MBD3-202ENST00000434436 GZF1Q9H116 711 aaPredicted RBP28.86■■■□□ 2.21
MBD3-202ENST00000434436 TMX3Q96JJ7 454 aa28.85■■■□□ 2.21
MBD3-202ENST00000434436 CCDC8Q9H0W5 538 aaPredicted RBP28.85■■■□□ 2.21
MBD3-202ENST00000434436 COL15A1P39059 1388 aa28.85■■■□□ 2.21
MBD3-202ENST00000434436 RFX5P48382 616 aaPredicted RBP28.85■■■□□ 2.21
MBD3-202ENST00000434436 MCM2P49736 904 aa28.84■■■□□ 2.21
MBD3-202ENST00000434436 NUCB2P80303 420 aa28.84■■■□□ 2.21
MBD3-202ENST00000434436 TLR7Q9NYK1 1049 aaKnown RBP28.84■■■□□ 2.21
MBD3-202ENST00000434436 TOGARAM1Q9Y4F4 1720 aa28.84■■■□□ 2.21
MBD3-202ENST00000434436 CASP7P55210 303 aa28.84■■■□□ 2.21
MBD3-202ENST00000434436 RABL6Q3YEC7 729 aaPredicted RBP28.84■■■□□ 2.21
MBD3-202ENST00000434436 NUP188Q5SRE5 1749 aa28.84■■■□□ 2.21
MBD3-202ENST00000434436 A0A087WZG4 1122 aa28.83■■■□□ 2.21
MBD3-202ENST00000434436 PKP1Q13835 747 aa28.83■■■□□ 2.21
MBD3-202ENST00000434436 COPRSQ9NQ92 184 aa28.83■■■□□ 2.21
MBD3-202ENST00000434436 TTLL7Q6ZT98 887 aa28.83■■■□□ 2.21
MBD3-202ENST00000434436 TNS2Q63HR2 1409 aa28.83■■■□□ 2.21
MBD3-202ENST00000434436 A1BGP04217 495 aa28.82■■■□□ 2.2
MBD3-202ENST00000434436 EVI5LQ96CN4 794 aa28.82■■■□□ 2.2
MBD3-202ENST00000434436 UPF3BQ9BZI7 483 aaKnown RBP28.82■■■□□ 2.2
MBD3-202ENST00000434436 DIAPH3Q9NSV4 1193 aa28.82■■■□□ 2.2
MBD3-202ENST00000434436 BAG4O95429 457 aaKnown RBP28.81■■■□□ 2.2
MBD3-202ENST00000434436 PTPN12Q05209 780 aaKnown RBP28.81■■■□□ 2.2
MBD3-202ENST00000434436 BRPF3Q9ULD4 1205 aa28.8■■■□□ 2.2
MBD3-202ENST00000434436 CUL4AQ13619 759 aa28.8■■■□□ 2.2
MBD3-202ENST00000434436 SNX14Q9Y5W7 946 aa28.79■■■□□ 2.2
MBD3-202ENST00000434436 KIAA1211Q6ZU35 1233 aa28.79■■■□□ 2.2
MBD3-202ENST00000434436 RUFY2Q8WXA3 655 aa28.78■■■□□ 2.2
MBD3-202ENST00000434436 ZDHHC9Q9Y397 364 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms